Oncorhynchus tshawytscha (Chinook salmon): 112223260
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Entry
112223260 CDS
T05605
Name
(RefSeq) liprin-alpha-3-like isoform X1
KO
K26226
liprin-alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112223260
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112223260
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
112223260
NCBI-ProteinID:
XP_042161242
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Position
LG24:complement(11209582..11253233)
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AA seq
1240 aa
AA seq
DB search
MMMCEVMPTISEDGRGGGPSSPGVGAGIGGPGGAMGGGGYGGRGESRGGGDEGGSTGNLE
SLMVNMLTERERLLESLRETQDSLGTAQLRLRELGHEKDSLSRQLSIALPQEFAVLTKEL
NVCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSE
VEVLKALKSLFEHHKALDEKVRERLRVALERVTLLEDQLQASAQEVISLRDQIKRRQQGL
DGGKDVRRLPNGPSSGLDDGEIDRQRETEIERQRAELSQLKERLALMCRQVGEIEEQLAA
ARREVTKSEEANQKLQRDVKEALCQREDMEERITTLERRYLSAQREATSLHDVKDKLENE
LASKESLHRQSEEKNRQLQERLDDAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEERH
GNFEERLRQMEAQLEEKNQALQRARQREKMNDEHNKRLSDTVDKLLSESNERLQLHLKER
MAALEEKNSLSEELANMKKIQDDLLANKDQLIAELERIQLELDQLRGRPGSSYSRLATME
LQGTSNVSSLPSTLFRRSLPGSASELRYPQGGGSLPAGYGSSSSGVVVRRAHRGRWAPPR
DDSNKYGEWDSGNMLGPGFEGGVEGGCSDDEDDRETLFGSELLSPSGQTDVQTLAIMLQE
QLEAINKEIKLIQEEKESTELRAEEIESRVSSVALDSSPLPPSSLGGGRDSVGRGYMTPS
LTSSTLASPSPPSSGHSTPRLPHSPARESDRQNSKEGDDCRALALIDSTPPPVPRALRLD
RMTHTHPGAGLDDHREFRSSQDSLHKASKKKSIKSSIGRLFGKKEKGRIGGPGSQSASLA
STPSDDLGSADPLGLAKMGTGTVEKDRRSKKKHDLLEEACRQGLPFASWDGPTVVTWLEL
WVGMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSA
PASTRSSTSDIWMTHAEMESLTAAIKPEVKEFSWDQILAYGDMNHEWVGNEWLPSLGLPQ
YRSYFMESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERRRD
ESQHQNQDVMVWSNERVMCWVQAIGLKEFADNLTESGVHGALLALDDTFDYTDLALLLQI
PNQNTQARQMLEKEYNALISMGTERRPDEDGTKTFTRSPSWRKMFREKDLRGVTSDSSET
LPANFRASAISTPSVTLRKVQSEVNSGPRGESGSVRTYSC
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtgtgaggtgatgcccaccatttcggaggacgggcgaggaggaggcccctcc
tctcctggggttggggctgggattggaggccctggtggggccatggggggagggggctac
ggtggccgaggggaatccaggggcgggggtgacgagggaggcagcacagggaacctggaa
tccctgatggtcaacatgctgaccgagagggagaggctgttggagagcctgagggagacc
caagacagccttgggacggcccagctacgcctcagagagctgggccacgagaaggactcc
ctctcaagacagctgtccatcgccctgccacaggagtttgctgtgctgactaaggagctg
aatgtttgccgggagcagctactggagagggaagaggagattgctgagctcaaggcggag
agaaacaacacacgtttgctactagagcacctggagtgtcttgtgtctcgtcacgagcgc
agtctgaggatgacggtggtgaagaggcaggcccagtccccggcgggggtctccagtgaa
gtggaggtcctcaaggccctcaagtccctgtttgagcaccacaaggctttggatgagaag
gttcgagagcgactccgtgtggcccttgagagagtgacccttttggaggatcaactacaa
gcgtccgctcaagaggtgatctctttaagagaccaaattaaaagacgacaacaagggttg
gacggcgggaaagacgtaaggcgcctacccaatggaccctcctctggattggacgacggt
gagatcgacagacagagagaaacggagatagagcggcagagagccgagctctcccagctg
aaagaaagattggcccttatgtgtcgacaggttggggaaatagaggaacagcttgcagcc
gccaggagggaagtgacgaagtcggaggaggccaatcagaagctccagagggatgtgaag
gaggctctgtgccaaagggaggatatggaggagaggatcactacattagagcgcaggtac
ctcagtgctcagagggaagcaacctctctacatgacgtcaaagacaagctggagaatgag
ctggccagcaaggagtcactgcacagacagagtgaggagaagaacaggcagctccaggag
cgtctggatgacgccaagcagaagctccagcagaccctgcagagagccgagacactgccc
gagatcgaggcccagctcgcccagagagtggctgccctcaacaaggcagaggagcgccat
gggaactttgaggagcgactacgacagatggaggcacaacttgaagagaaaaatcaggca
ttgcagagggcaaggcagagagagaaaatgaacgacgaacacaacaaacgcctctcggac
acagtggacaagctactgtccgagtccaacgagagactgcagcttcacctcaaagagaga
atggctgccctcgaggagaagaattccctgtcagaggagctcgcaaacatgaagaaaatc
caagatgatctgctagcgaacaaggaccagctcatagctgagctggagaggattcagctg
gagctggatcaactgaggggcaggcctggctcttcctattccaggttagccacaatggag
cttcaagggacgagcaacgtgagctcacttccctccaccctttttcgaagatctcttcca
gggagtgcctcagagctccgttacccccagggtggtggctccctcccagccggctacggc
agctcctccagtggcgtggtggtccggagggcacaccgcggccgatgggctccccccagg
gatgacagcaacaagtatggagagtgggacagtggcaacatgctgggtcccgggttcgag
gggggagtcgaggggggctgctcagatgacgaggacgacagggagaccctgtttggctcg
gagctgctttcgcccagcggacagacggacgtgcagacccttgccatcatgctgcaggag
caactggaggccatcaacaaggagatcaagctgatccaggaggagaaggagagcactgag
ctgagggcggaggagatcgagagccgggtgagcagcgtggccctggactcctctcctctc
cccccctcctcactgggtgggggcagggacagcgtggggaggggctacatgaccccctcc
ctcacctcctccaccctggcctccccttcaccccccagctctggacattccaccccccga
ctgccacattcccctgccagagaatcagacagacagaacagcaaagagggcgacgactgc
cgggcgctagccttgattgactccacccctcctccggttcctcgtgctctgcgattggat
agaatgactcacacacacccaggggctgggctggatgatcaccgcgaattccgcagtagt
caggactctctccacaaagccagcaagaagaagagcatcaagtcctccattggacgcctg
tttgggaagaaggagaaggggaggatcggaggacctgggagtcagtctgcctctctggcc
tccacaccttccgatgacctgggctcagctgaccccctgggcctggccaagatgggaact
ggcaccgtggagaaagatcgccgcagcaagaagaagcacgacctgctagaagaagcttgt
cgccagggtcttcccttcgcttcatgggatggccccacggtggttacatggcttgagttg
tgggtgggcatgcccgcctggtatgtggcagcatgtcgtgccaatgtgaagagcggtgcc
atcatggccaacctgtcggacacagagatccagcgggagattggcatcagtaaccccctg
caccgcctgaaactgcgcctggccatccaggagatggtgtccctcaccagcccctcggca
ccggccagcacacgctcctcgacgagtgatatatggatgactcatgccgaaatggagtca
ctgaccgctgccataaaaccagaagtgaaggagttcagctgggaccagatccttgcctat
ggggacatgaaccatgagtgggtagggaatgagtggcttcccagcctgggtctgccccag
taccgctcctacttcatggagtccctggtggacgctcgcatgctggaccacctcaccaag
aaggagctgaggggacagctcaaaatggtggacagcttccacagggtaagtctgcattat
ggcatcatgtgcttgaagcgtttgaactacgacaggaaggagcttgaaaggaggagggat
gagagccaacatcagaaccaagatgtgatggtatggtccaatgagcgagtgatgtgttgg
gtccaggccattgggctaaaggagtttgcagataacctcacagagagtggggtacatggg
gccctcctagccctggacgacacgtttgactacactgaccttgccctgctcctccagata
cccaatcagaacacacaggcgaggcagatgctggagaaggagtacaatgccctcatctcc
atgggaactgagagaagaccagatgaggacggcactaagacgttcacacgctcgccctcg
tggaggaagatgttcagagagaaggacctccggggcgtgacctctgactcctcagaaaca
ttacccgccaacttccgtgcctccgccatctccacgccctccgtcaccctgaggaaagtc
cagagtgaagtgaactctgggcccaggggtgagtcggggtcagtgagaacatattcctgc
tag
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