Oncorhynchus tshawytscha (Chinook salmon): 112223373
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Entry
112223373 CDS
T05605
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3
KO
K22991
WD repeat-containing protein 45
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112223373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112223373
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112223373
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
BCAS3_WD40
ANAPC4_WD40
WD40
DUF5711
Motif
Other DBs
NCBI-GeneID:
112223373
NCBI-ProteinID:
XP_024242135
LinkDB
All DBs
Position
LG24:25490105..25505403
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AA seq
344 aa
AA seq
DB search
MNLLPSNAHGNGLLYAGFNQDHGCFACGMENGFRVYNADPLKEKEKQEFMEGGVSHVEML
FRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMI
KVFTFTHSPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHSGHVQIVDLANTEKPPVD
IPAHEGALCCIALNLQGTRIATASEKGTLIRIFDTMAGHLIQELRRGSQAANIYCINFNQ
DASLICLSSDHGTVHIFAAEDPKRNKQSSLASASFLPKYFSSKWSFSKFQVPSNSPCVCA
FGTEPNSVIAICADGSYYKFLFNPKGECSRDVYAQFLEMTDEKI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattaccgtcaaatgcacacgggaacggactcttgtacgcgggattcaaccag
gatcatggatgctttgcttgcggaatggagaatgggtttagagtgtacaacgcagaccca
ctcaaagagaaagaaaaacaagagttcatggagggcggggtcagccatgtggagatgctg
ttcaggtgtaactacctagcgctggtcggaggagggaagaagcccaaatatccacctaac
aaagtgatgatctgggatgacctgaagaaaaagactgttatagaaatcgagttctccacg
gaggtcaaagcagtgaagcttcgaagggaccggatcgttgtggtcctggactcaatgatc
aaagtgttcacgttcacccacagccctcatcagctgcatgtatttgagacctgctataac
cccaaaggtctgtgtgtgctgtgtcccaacagtaacaactctctcctggcgttcccgggc
acccactctgggcatgtgcagatcgtagacctggccaacacagagaagcctccagtggac
atccccgcccatgagggggcgctgtgctgcatcgccctcaacctgcagggaaccaggata
gccaccgcctctgagaaaggaaccctgatcagaatatttgacaccatggcaggtcacctg
attcaggagttgaggcgggggtcacaggccgctaacatctactgcatcaacttcaaccag
gacgcgtccctcatctgtctgtctagtgaccatggtacagtccacatattcgctgcagag
gaccccaagaggaacaaacagtccagcttagcctcggctagtttcctgcctaagtacttc
agctccaagtggagtttctccaagttccaggttccatcaaattcgccgtgtgtgtgtgcc
tttggaacagaacccaactctgtcatagccatttgtgctgacggcagctactacaagttc
ctgttcaacccgaagggggagtgttcccgagacgtctacgcccagttcctggagatgact
gatgagaagatctga
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