Oncorhynchus tshawytscha (Chinook salmon): 112223413
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Entry
112223413 CDS
T05605
Name
(RefSeq) YTH domain-containing family protein 1 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112223413
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112223413
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Cbm74
TFIIA
Motif
Other DBs
NCBI-GeneID:
112223413
NCBI-ProteinID:
XP_024242187
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Position
LG22:complement(30193186..30211505)
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AA seq
620 aa
AA seq
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MSATSIDPQRSKGQASKVQNGSLHQKETVHDNDFEPYLTGQSTQVRDWPQNSSYQSMTDP
YLSSYYAPSIGFPYPLSEAPWSTGGDPPIPYLTPYGPLSNGDHHFMPDTVFGQPGGLGSS
IYPHRFNFFPENPTFSAWGTSGSQGQQTQSSAYGGSYSYPPSSLGGTLVPDGQTGFHSDT
LNKAPGMNSLEQGMVGLKIGGDLTGQGSGIKAVGSVIGGPPVVAQGNGGTSIGMPPPKPA
SWAAIASKPAKPQQLKSKVKPGMPSPGGTLPPPPIKHNMDIGTWDNKGPMNKVAQAPVQQ
QQAMSMPHGHPMQPQTPMQQNPMQPPPQSLLQQQMQPMALHHQHPPQPYQHQTQPPPPQT
RWVAPRNRNLGYGQGGAGMDGSSMIGIVSGGNGGPPGSAGMVPGGVENHPVLEKLRAAHS
YNPRVFEWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSLNGKGPVYL
LFSVNGSGHFCGVAEMRSSVDYGTSAGVWAQDKWKGKFDVDWLFVKDVPNSQLRHIRLEN
NDNKPVTNSRDTQEVPLEKAKQVMKIIVGFKHTTSIFDDFSHYEKRQEEEEEVRKTFEPP
APIQNRSRLEQERQNRSKQQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccacaagcattgaccctcagagatcaaagggacaagcatctaaagtgcaaaat
ggttcgctgcatcagaaggagactgtccacgacaatgactttgagccgtacctcactggc
caatcaacccaggtgcgtgactggccgcagaacagcagctaccagtccatgaccgacccc
tacctgtccagctactacgccccctccatcggcttcccctaccccctcagtgaggccccc
tggtccaccggtggagaccccccaatcccttacctcaccccctacggacccttgagcaat
ggagaccaccacttcatgcccgacaccgtgtttggccagcctggagggcttggcagcagc
atctacccccaccgctttaactttttccctgagaacccgaccttctccgcctggggcacc
agtggctcccagggccagcagactcagagctcagcctacggtggcagctatagctaccct
cccagctccctgggtggcacactggtgcctgacggccagacaggcttccatagcgacacc
ctcaacaaggcccctggcatgaacagcctggagcagggcatggtgggcctgaagatcggt
ggtgacctcacaggccaggggtcaggaatcaaggctgtgggctctgtgattggtggaccg
ccggtcgtggcacaggggaacgggggtacgtccatcggtatgcccccgccgaagcccgcc
tcctgggcggccatcgccagtaagccggccaaaccccagcagctgaagtccaaggttaaa
ccaggcatgcccagccctgggggaaccctgccccctccgcccatcaaacacaacatggac
attggcacttgggacaacaaggggcctatgaataaagtggcccaagcccccgtgcagcag
cagcaggctatgagcatgccccatggccaccccatgcagccccagacccccatgcagcag
aaccccatgcagccccctccccagtccctgctgcagcagcaaatgcagcccatggcctta
caccaccagcaccctcctcaaccctaccaacaccagacccaacccccacctccccagacc
cgctgggtcgccccgcgcaaccgtaaccttggatacggacaaggaggggccggcatggac
ggtagcagtatgattggcatagtcagcgggggtaatggcggtccccctggttctgccggt
atggtccctggtggagtggagaaccacccagtgttggagaagctgcgtgccgcccacagc
tacaaccccagggtgtttgagtggaacctgaagaacggccgtgtgttcatcatcaagagc
tactctgaggacgacatccaccgttccatcaagtactccatctggtgcagcaccgagcac
ggcaacaagcgcctggatggggccttccgcagcctcaacggcaaaggacccgtttacctg
ctgttcagcgtcaacggcagcggccacttctgcggcgtggccgagatgcgctcgtccgtg
gactacgggaccagtgccggcgtgtgggcgcaggacaagtggaagggcaagtttgacgtg
gactggctgtttgttaaggacgtgcccaacagccagctgcgccacatccgcttggagaac
aacgacaacaagccggtgaccaactcccgggacactcaggaggtccctctggagaaggcc
aagcaggtgatgaagatcatcgtgggcttcaagcacaccacctccatcttcgacgacttc
tcccactatgagaagaggcaggaggaagaggaggaggtacgcaagacctttgagccgcct
gcacccatccagaaccgttctcggctggaacaggagcgccaaaacaggagtaaacagcag
tag
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