Oncorhynchus tshawytscha (Chinook salmon): 112223416
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Entry
112223416 CDS
T05605
Symbol
fbn2b
Name
(RefSeq) fibrillin-2b isoform X1
KO
K23342
fibrillin 2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112223416 (fbn2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112223416 (fbn2b)
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112223416 (fbn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
TB
hEGF
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
112223416
NCBI-ProteinID:
XP_042178988
LinkDB
All DBs
Position
LG06:19539498..19663765
Genome browser
AA seq
2887 aa
AA seq
DB search
MGAGKLARVLLGWAAVCLASVHTAYGQAGDGGYQASRFTGKVDEREVQRVRRRGQETLRG
PNVCGSRFHSYCCPGWKTLPAGNQCIVPICRNSCGDGFCSRPNMCTCGSGQLSPSCGAGA
GVQSCNVRCMNGGSCQEDSCSCQKGYTGNHCGQPVCENGCQNGGRCIGPNRCACVYGFTG
PQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPAQPHPCRRG
FIPNIRSGACQDVDECQAIPGLCAGGNCINTVGSYECKCPAGHRQSDTSHKCEDIDECST
IPGVCDGGECTNTAGSYVCTCPRGYITSTDGARCVDQRVGTCFSALANGRCAGDLQGQYT
KMQCCCDTGRCWASGQIPEMCPVRGSDEYRRLCIEGVPHGTGNGGFPHGVFPHGHGYSYG
YKLNPHGPNGNGHHGNGGGIGGGGIGGGGQGGGGNGFGGNGGGRNIVPVSVNETVDVCKH
FTNLCLNGRCIPTPTSYRCECNMGYRQDVRGECIDVDECVSNPCVNGDCVNTPGSYHCKC
HEGYQGTPTKQACIDIDECIVNGVMCRNGRCVNTAGSFQCICNAGFELTPDGKNCIDHDE
CDTTNMCLNGMCINEDGSFKCICKTGFALAPNGRYCTDIDECQTPGICMNGRCMNSEGSF
RCECPPGLAIDVDGRVCVDTHMRTTCYGAIKMGTCSRPFPGAVTKSECCCASPEHGFGEP
CQPCPARNSAEFQAVCSSGIGITADGRDINECALDPDICQNGMCENLRGSYRCICNIGYE
SDSSGKNCVDINECLVNRLLCDNGLCRNTPGSYTCSCPKGFVFKPDSETCEDINECESSP
CVNGVCRNIAGSFNCECSHGSKLDSTNTICVDSMKGTCWLNIQDGRCEVNINGATLKSEC
CSTLGAAWGSPCERCEIDTACSRGFARMKGVNCEDINECEVFPGVCTNGRCVNTQGSFRC
ECGEGLTLDGSGRTCVDVRSEQCYMKWHEDECGEPLPGRYRVDMCCCSVGAAWGIDCEEC
PKAGTPEYKAICPRGPGFANRGDILTGRPFYKDVNECKVFNGLCSHGTCRNTIGSFKCRC
SSGFALNMEERNCTDIDECHISPDLCGHGTCVNTPGSFECECFEGYESGFMMMKNCMDFD
ECERNPLLCIGGTCLNTEGSYECECPPGHQLSPDGSSCEDVNECQLSDNLCKNGHCVNMV
GNYQCSCDTGYQVTPDRQGCVDIDECTIMNGGCDTHCTNSEGSYECSCSEGYALMPDLRT
CADIDECEDSPDICDGGQCTNVPGEYRCLCYDGFMASMDMRTCIDVNECELNPNICLHGD
CENTKGSFICHCQLGYFVKKGSTGCTDIDECEIGAHNCDMHAACLNVPGSFKCRCRDGWV
GDGIKCVDVDECSTEEHNCNLNADCVNTPGSYRCACKEGFNGDGFSCSDMDECADNVNLC
ENGQCLNAPGGYRCECEMGFTPTEDSKACQDIDECNFQNICVFGTCQNLPGMFRCVCDDG
YELDRSGGNCTDINECADPVNCINGLCVNTPGSYLCNCPPDFELNPTGVGCVDTRVGNCF
LDTLARGDGGISCSAEIGVGVTRASCCCSLGGAWGNPCELCPQINSTEYKTLCPGGEGFR
PNPITVILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEETRICEDIDECTAHI
GICGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNGTCENELSFNMTKKM
CCCAYNVGKAWNKPCEACPTPATSEYQLLCGNQAPGFIIDIHTGKPIDIDECREIPGICA
NGVCINQIGSFRCECPVGFSYNNILLICEDIDECNSGDNLCQRNANCINIPGSYRCECSP
GFKLSPSGACVDRNECQEIPNVCSHGECIDTQGSYRCLCHNGFKATADQTMCMDIDECDR
QPCGNGTCKNTVGSYNCLCFSGFELTHNNDCMDIDECSALVGQVCRNGQCINGLGSFQCL
CQEGYELTLDGKNCVDINECVSLPGTCSPGICQNLDGSFRCICPAGYEVQNDQCIDINEC
EVEPNICQFGTCTNTPGSFQCICQNGFVLSDNGRRCFDTRESFCFTRFESGKCSVPKAFN
TTKAKCCCSKMPGEGWGDPCELCPRDSEAAFDSLCPYGHGALPGRGDAREDMNECLDNPG
VCQNGVCINTDGSFRCECPFGYNLDYTGINCVDTDECSIGNPCGNGTCTNVLGGFECSCH
EGFEPGPMMTCEDINECSLNPLLCAFRCVNTFGSYECMCPSGYVLRDDHRMCRDQDECSE
GLDDCESKDMSCKNLIGTFMCICPPGLQRRPDGEGCMDLNECRAKPGICKNGRCENTVGS
YRCVCNEGFQPSSTGTDCIDNRQGFCFTEVLQTMCQQGSTNRNSVTKSECCCNLGRGWGP
QCELCPLPGTVQYKRMCPLGPGYTTDGRDINECTVMPDLCKNGQCINTIGSFRCHCNVGY
TTDFTGTSCIDMDECSASPRPCNFLCKNTEGSYLCSCPRGYTLQPDGKTCKDLDECSTKQ
HNCQFLCVNTIGGFTCKCPAGFTQHQTACIDNNECNGQNSVCGSRASCVNTPGSFNCDCG
KGFSLDTTGLECEDVDECGSNHRCQHGCQNMMGGFRCGCPQGYVQHYQWNQCVDENECSG
VSVCGSASCYNTLGSFKCVCPSGFDFELGGGGCQDVNECSMGSNPCSFGCSNTDGGYLCG
CPGGYYRAGQGHCISGQGFQDQFSSEGDDEDSLSPEACYECKINGDVGKKGRHRRHSAGD
NDLKEVSMASLDTQESIPMNLSLASLHNKEPLLELLPALEPLEHHVRYVITHGNQDEHFR
LLERHNGKSVLRLGRKPPPPGSYRLEIASLPLFGPRRLRQLEEEHDSDYLLGEIGDALRI
KLHIHLN
NT seq
8664 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagggaagctggcccgggtgctgttgggatgggcggccgtgtgcttggcctcg
gtccacactgcgtacggccaggcgggagacggagggtaccaagccagccgcttcacagga
aaggtggacgagagggaggtgcagagggttcgcaggagaggacaggagacactcagaggg
cccaatgtgtgtggctctcgcttccactcctactgttgccctggctggaagactctgcct
gcagggaaccagtgtatcgtcccaatctgccgtaactcgtgtggtgatggcttctgctcc
agacccaacatgtgcacttgcggcagcggacagctctcccccagctgtggggccggtgcc
ggagtgcagagctgtaacgtcaggtgtatgaacggaggcagttgccaggaagactcctgc
tcctgtcagaagggttacaccggaaatcactgtggacagcctgtgtgtgagaatggttgc
cagaacggagggcgctgtattgggcccaacagatgtgcctgtgtctacggcttcactggc
ccgcagtgcgagagagactacaggaccgggccctgttttacgcaggtcaacaaccagatg
tgtcagggccagctgagtggcattgtgtgcaccaagaccctgtgctgtgccaccattgga
cgggcatggggacacccctgtgagatgtgccctgcacagcctcacccctgtcgccgaggc
ttcatccccaacatccgcagtggagcgtgccaggatgtggatgagtgtcaggccatccct
gggctgtgtgcaggaggtaactgtatcaacacagttggctcctatgagtgtaaatgtccc
gcgggccatcgccagagtgacaccagccacaagtgtgaagatattgacgagtgcagcact
atcccaggtgtgtgtgacggaggtgaatgcacaaacacagccggtagctacgtctgcacc
tgtccccgtggttacatcacaagcactgacggtgccagatgtgtagaccagcgtgtgggc
acgtgtttctcggcgttggcgaacgggcgctgtgcgggtgacctgcagggccagtatacc
aagatgcagtgctgctgtgacacgggccgctgctgggcttctggacagatccctgagatg
tgccctgtcaggggatccgatgagtacagaaggctgtgcatcgagggggtgccccatgga
acaggtaacggaggtttcccccacggagtcttcccccacggccacggttacagctacggc
tacaaactcaacccccacgggcctaacggaaatggtcaccatggcaacggaggaggaatc
ggaggaggaggaatcggaggagggggacagggaggaggaggcaatggttttggaggaaac
ggcggcgggcgtaatatcgtccctgtgtcagtcaatgagaccgttgacgtgtgtaaacat
ttcaccaacctgtgtttgaacggccgctgtatccccaccccgaccagctaccgctgtgaa
tgtaacatgggctacaggcaggacgtacgcggggagtgtattgatgtggatgagtgcgtc
agcaacccttgtgtcaacggagactgtgtcaacacacctggatcgtaccactgcaagtgt
cacgaaggctaccagggcacccccaccaaacaggcctgcattgatattgatgagtgcatc
gtgaacggagtgatgtgtcgtaacggacgttgtgtcaacactgccggaagcttccagtgc
atttgcaacgctggctttgagctcactcctgatgggaagaactgcatagatcatgatgag
tgtgacaccaccaacatgtgtctcaatggaatgtgtatcaacgaggacggtagcttcaag
tgtatctgcaaaactggcttcgccctggcacctaacggacgttactgcacagacattgat
gagtgccagacaccaggcatctgtatgaacggacgctgtatgaactctgagggctccttc
cgctgtgagtgcccaccaggcctggccatcgatgtggacgggagagtgtgtgtcgacaca
cacatgcgtaccacctgctacggtgccatcaagatgggcacgtgctcgcgtccctttcct
ggcgccgtcactaagtctgagtgctgctgtgccagtcctgaacatggcttcggagagccc
tgccaaccctgccctgcccgcaactctgctgagttccaggccgtgtgcagcagtgggatt
ggcatcaccgctgacggcagagacatcaacgagtgtgccttggaccctgacatctgtcag
aacggcatgtgtgagaacctgagagggagctaccgttgcatctgtaacatcggctacgag
tccgactccagcggcaagaactgtgtggacatcaatgagtgcctagtgaaccgtctgctg
tgtgacaacggcctgtgtagaaacacccccggcagctacacctgctcctgtcccaaaggc
ttcgtcttcaaacctgactctgagacctgcgaagatatcaacgagtgtgagtccagcccg
tgtgtcaacggagtctgccgcaacatcgccgggtccttcaactgcgagtgttcccacggc
agcaagctggactccaccaacaccatctgcgtggacagcatgaagggaacatgctggctg
aacatccaagatggccgctgtgaggtcaacatcaacggtgccacgctcaagtccgagtgt
tgctctacactgggagctgcctggggcagtccctgtgaacgctgcgagatcgacactgcc
tgctctagagggttcgctcgtatgaaaggagtcaactgtgaagacatcaatgagtgtgag
gtgttcccaggggtgtgtaccaacgggcgctgtgtcaacacccagggctccttccgctgt
gagtgtggcgaggggctcactctggacgggagtggacgcacatgcgtggacgtgcgcagt
gagcagtgctacatgaagtggcacgaggatgagtgtggcgagccactgcccgggcgctac
cgcgtggacatgtgctgctgctccgtgggcgcggcctggggcattgactgtgaggagtgt
cccaaggcgggaaccccggagtacaaggccatctgccccagaggaccaggctttgccaac
cgaggagacatcctgactggcagacccttctacaaagatgtaaatgagtgtaaggtgttc
aacggcctatgctcccacggaacctgccgcaacaccatcggcagcttcaagtgtcgctgc
agcagtggcttcgccctcaacatggaggagaggaactgcacagatattgatgaatgtcat
atctctccggacctgtgtggccacggcacctgtgtgaacacccctggcagctttgagtgt
gaatgcttcgagggctatgaaagtggcttcatgatgatgaagaactgcatggattttgat
gagtgtgagcggaaccctctgctgtgtataggaggcacctgtctgaacacagaggggagt
tatgagtgtgaatgtccccccggacaccagcttagtcccgatggttcctcctgtgaagat
gtgaacgagtgccagctgagtgacaacctgtgtaagaacggccactgtgtcaacatggtg
gggaactaccagtgctcctgtgacactggttaccaggttacaccagacagacagggctgt
gtggatattgatgagtgtaccatcatgaacggaggctgtgacacacactgcaccaactca
gagggcagctacgagtgcagctgtagtgagggatacgctctcatgcctgacctcaggacc
tgcgctgatatagatgagtgtgaggacagccctgatatctgtgatggaggccagtgcacc
aacgtgcctggagagtaccgctgtctctgctacgacggattcatggcctccatggacatg
aggacctgcatcgatgtgaatgagtgtgagctgaaccctaacatctgtctgcatggggac
tgtgagaacaccaagggatccttcatctgccactgccagctggggtactttgttaagaag
ggctccaccggctgcacagatattgatgagtgtgagattggggctcacaactgtgacatg
catgctgcctgtctcaacgttcccgggagcttcaagtgtcgttgtcgtgacggctgggtg
ggagacggcatcaagtgtgtagacgtggatgagtgttccactgaggagcacaactgcaat
ctcaatgcagactgtgtcaacacccccggctcctaccgctgtgcctgcaaggagggcttc
aatggagacggcttctcctgttctgatatggatgagtgtgctgacaacgtgaacctgtgt
gagaatggccagtgtctgaacgctccggggggctaccgctgtgaatgtgagatgggcttc
acccccaccgaggacagcaaggcctgccaggatattgacgaatgtaacttccagaacatc
tgtgtgtttggaacgtgtcagaatctaccggggatgttccggtgtgtgtgtgacgacggg
tacgagctggaccgcagcggaggaaactgcactgacattaatgagtgtgcggaccctgtg
aactgcatcaatggcttgtgtgtgaacacacccggaagctacctgtgtaactgccctcca
gacttcgagctcaaccctactggagtgggctgtgtggacacgcgagtgggcaactgtttc
ctggatacgttggctcgcggcgacgggggcatctcctgcagcgctgagatcggcgtgggc
gtcacccgcgcctcctgctgctgctccctagggggagcctggggaaacccctgtgaactc
tgcccccaaatcaactccaccgagtacaagacactgtgtcctggaggagagggcttcaga
cccaaccccatcactgtcatcctggaagacattgatgagtgtcaggagctgccaggcctg
tgccagggtggtaactgtgtcaacaccttcggcagcttccagtgcgagtgccctgcaggc
tactacctcaatgaggagacacgcatctgcgaggatattgatgagtgcacagcccacatt
ggaatctgtggccctggtacctgctacaacaccttggggaactatacctgcgtgtgtcct
cctgagtacatgcaggtcaacggaggaaacaactgcatggatatgaggaagagcgtgtgt
taccgcaactttaacggcacgtgtgagaacgagctgtcgttcaacatgaccaagaagatg
tgctgctgtgcctacaacgttggcaaggcctggaacaagccctgtgaagcctgccctacc
cctgccacctcggagtaccagttactatgtgggaaccaggctcctgggttcatcatagat
atccacacaggcaagcccatcgatattgatgagtgtcgagagatcccggggatatgtgcc
aacggagtgtgtatcaaccagataggaagcttccgctgtgaatgtcccgtgggtttcagc
tataacaatatactgctcatctgtgaagatattgacgagtgtaacagtggagacaacctg
tgccaacgcaacgccaactgtatcaacatcccagggagctaccgctgcgagtgctcgcca
ggcttcaagctgtcccccagcggggcctgcgtggaccgtaacgagtgccaggagatccct
aacgtgtgtagccacggagagtgtatcgacacccagggcagctaccgctgtctctgccac
aacggattcaaggctaccgccgaccagaccatgtgcatggatatcgatgagtgtgacaga
cagccgtgtgggaacggaacctgtaagaacacagtgggctcctacaactgtctctgcttc
tctggcttcgagctcacgcacaacaatgactgcatggacattgatgagtgcagtgcgttg
gtgggtcaggtgtgtaggaacggccagtgtatcaacggcctgggctccttccagtgtctc
tgtcaggaaggctacgaactcaccctagacggaaagaactgtgttgatatcaatgaatgt
gtgagtcttcctgggacctgctctcctggaatctgtcagaacctggatggatccttccgc
tgtatctgcccagctggatacgaggtccagaacgatcagtgtatagatatcaacgagtgt
gaggtggagcccaatatctgccagtttggcacgtgcaccaacaccccaggaagcttccag
tgtatctgccagaatggcttcgttctgtctgacaatggacgccgctgctttgatactaga
gagagcttctgcttcacccgctttgagtctggcaagtgttctgtacctaaagccttcaac
accaccaaggccaagtgctgctgcagcaagatgccaggcgagggctggggagacccctgc
gagctgtgcccacgcgatagcgaggcagcctttgacagcctgtgtccctacggccatgga
gccttgcctggacgaggggacgcccgtgaggatatgaatgagtgtctggacaacccaggc
gtctgtcagaacggtgtctgtatcaacacggatggatcgttccgctgcgagtgtcccttc
gggtacaacctggactacactgggatcaactgtgttgacactgatgagtgctctataggg
aacccctgtggtaacgggacctgtactaacgtgttgggaggcttcgagtgctcctgtcat
gaaggcttcgaacccggacctatgatgacctgtgaagatatcaacgagtgttctctgaac
cccctgctgtgtgccttccgctgtgtcaatacttttggttcgtacgagtgcatgtgtccc
tcgggctacgtgctgcgagatgaccaccgcatgtgcagagaccaggatgagtgttcagag
gggctggatgactgtgagtccaaggacatgtcctgtaagaacctgattggcacctttatg
tgtatctgcccccctggcctgcagcgcagacctgacggagagggttgcatggacctgaat
gagtgtcgtgcaaagcctggcatctgtaagaacgggcgctgtgagaacacagtgggaagc
taccgctgtgtgtgcaacgagggcttccagcccagctccaccggaacggactgtatcgat
aaccgtcagggcttctgtttcaccgaggtgctccagactatgtgccagcagggctccacc
aataggaacagtgtcaccaaatctgagtgctgctgcaacctcggacgtggctggggaccc
cagtgtgagctctgccctctgcctggcaccgtgcagtacaagaggatgtgcccactggga
cccgggtacaccaccgacggcagagacatcaatgagtgcacggtgatgccagacctgtgt
aagaacggccagtgcatcaacaccatcggatcgttccgctgccactgcaacgtgggttat
accaccgacttcaccggcacctcctgcattgatatggatgagtgttccgcatctcccagg
ccctgtaacttcctgtgtaagaacacagagggcagctacctgtgctcctgccccagagga
tacactctgcagcctgacggaaagacctgcaaagatctggatgagtgttccaccaagcag
cacaactgtcagttcctgtgtgtcaacaccatcggagggtttacatgcaagtgtcctgca
ggtttcacccagcaccagaccgcctgcattgacaacaatgagtgtaatgggcagaacagt
gtgtgtggctccagagcctcctgtgtcaacactcccggcagcttcaactgtgactgtggg
aaaggcttttctctggacaccactggcctggagtgtgaagatgtggatgagtgtggtagt
aaccatcgctgtcagcatggctgtcagaacatgatgggaggtttccgctgtggctgtcct
cagggctatgtgcaacactaccagtggaaccagtgtgtggatgagaacgagtgttcgggc
gtgtctgtgtgtggctcggcctcctgctacaacaccctgggcagctttaagtgtgtgtgt
ccatccggttttgactttgaactgggtgggggtgggtgccaggatgtcaatgagtgttcc
atgggcagtaacccctgcagcttcggctgctccaacacagacggaggatacctgtgtggc
tgtcctggaggttactacagggctggacagggtcattgtatttcaggtcagggcttccag
gaccagtttagctcagagggagatgatgaggacagtctgtctccagaggcctgctacgaa
tgtaagatcaacggagacgtcggcaagaagggccgacacagacgtcactctgctggagac
aacgacctcaaggaggtgagcatggccagcctagacacccaggagtccatccccatgaac
ctgagcctggcctcgctgcacaacaaggagcccctgctggagctgctgccggccctggag
cccctggagcaccatgtgcgctacgtcatcacccacggcaaccaggacgagcacttccgc
ctgctggaacgccacaatgggaagagcgtgctgaggttgggcaggaagccacctccccct
ggctcctaccgcctggagatcgctagtctgcccctgttcgggccgcggcgcctccgacag
ctggaggaggaacacgacagcgactacctgctgggagagataggagacgccttgcgcatc
aagctgcacatccacctgaactga
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integrated database retrieval system
