Oncorhynchus tshawytscha (Chinook salmon): 112223465
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Entry
112223465 CDS
T05605
Name
(RefSeq) TBC1 domain family member 12-like isoform X1
KO
K24795
TBC1 domain family member 12
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112223465
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
112223465
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
112223465
NCBI-ProteinID:
XP_024242254
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All DBs
Position
LG24:complement(20150437..20168840)
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AA seq
876 aa
AA seq
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MSTGMRRVGPTADAAREAGEDISRSTVACVRVGSTIMLDLVTDSPSGGTVSNCVIPEPGS
DSATNGFTGSIVVASKAGSCSAITAVNREEMDRSGLWGTSLTQKNNDCSAERLDACVTAA
EALQSLAHSWNGQLEQRCTAASRTGPAGFSIGDTVCVIQSPLRSDAVIRPHINRSTTPDK
EEKMANGGLLIGYNSAKLHTETAGTILSDGAATSISNPQCEKLPMSAVSAREGHHESCNI
REEPDGAGAQPRKQVNVAGELSDGATSSLTSQGLPSSPAPRKDPCSVKPDTKQGVEPSTS
GHPGGDPSSRLHPQSHKTTSLNYDPSSILSPGDEDEDGETFVELGAQGYSDLRFMDVSLS
SRNTYESSRRQSAPGHIGLSVDSSELALQSKRPGIAEYFGRGLFSKKHIEPKSPSQNVPG
WKLFGKVAARESPPKDSRTIQQESVPGGLTSVSAPNLLSEGEYEARAGKAGSGGTSPTQP
QHGRRKNLDFEPLSTTALILEDRPSNLPAKPVEEAQRHRQEYDEMVAEAKKRELKEAQRK
RKEMKERFKQEDSIANAMVVWNHDILPNWDNMRNTRRVRELWWQGLPPNVRGKVWSLAIG
NELNITPELYDIFLSRAKERWRSFSETGSEADDGASLADRESSLDLIKLDISRTFPPLFI
FQKGGPYHDLLHSVLGAYTCYRPDVGYVQGMSFIAAVLILNLEEADAFIAFANLLNKPCQ
LAFFRVDHDLMLKYFAAFEVFFEENLPRLFNHFQISNLTPDLYLIDWIFTLYSKSLPLDV
ACRVWDVFCRDGEEFLFRTGLGILRLYEDVLLQMDFIHSAQFLTRLPEDIDSDRLFACIV
AMPMLNGNKKWSQVFNALIKENKDMDRNCSQVLKSS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagggatgagacgtgttggaccgaccgcagacgcagcccgtgaagcaggagag
gatatttcccgttccacagtagcgtgtgtacgtgtcgggagtacgataatgctcgattta
gttactgacagcccatctggtggcactgtaagcaattgtgtcattcctgagccaggtagc
gactctgccacaaacgggtttactgggtcaatagtggttgcctccaaggcagggagctgc
tctgctatcactgcagtgaatcgagaggaaatggacagaagtggtctctgggggacctca
ctgactcagaagaacaatgattgctctgcagaaagactagatgcctgtgtgacagcagct
gaggcactgcagtcattggcacactcctggaatggacagcttgaacagaggtgcacagca
gcctcccggactggtccggcggggttctcgattggagacacagtctgtgttatacagagt
cctcttcgcagtgatgctgttattagaccacatattaaccgaagtacgacccctgacaag
gaggaaaaaatggcaaacggtggattattgattggatacaacagcgcaaagttacacaca
gagacagctggaactattctttctgatggagctgcaacctctatctctaacccacaatgt
gaaaaactccccatgtctgcagtgagtgcaagggagggccatcacgaatcctgcaatatc
agagaggaacctgatggagccggggcccagcctagaaaacaagttaacgtggcaggagag
ctatctgatggggctacttccagtctcacctctcagggtttaccatcaagcccagcacca
aggaaagacccctgcagtgtcaaaccagacaccaagcagggagtagaaccatcaacatct
ggtcacccaggaggggatccatcctccagactccatcctcagtcccacaagaccaccagt
ctgaactatgacccgtccagcattctcagcccaggggacgaggatgaggatggggagacc
tttgtggagctgggggcccaaggctacagtgacctcaggttcatggacgtcagtctgagc
tccaggaacacctatgagtccagcagacgtcagtccgccccaggacatataggactgagt
gtggactcctctgaactggccttacagtcaaaaagacctggcatcgctgagtattttggc
aggggtttattttccaagaagcatatagagccgaagagtccgtctcagaatgtacctggg
tggaagctgtttggaaaggttgctgccagagagagccctcccaaggactccaggaccata
cagcaggagagtgttccaggtggtctcacgtctgtgtctgcacccaatctcttaagtgaa
ggggagtacgaggccagggcgggcaaggctggatctgggggaacgtctcctactcagcct
caacatggccggaggaagaacctggactttgaaccactgtccaccacagctcttatccta
gaggacaggccttcgaaccttcctgcaaagcctgtggaggaggcccagcgtcaccgtcag
gagtatgacgagatggtggccgaggccaagaagagagagttaaaggaggcccagaggaag
aggaaagagatgaaggagaggtttaaacaggaagacagcatcgccaacgccatggtggtc
tggaaccacgacattctgcccaactgggacaacatgcgtaacactcggcgggtgagagag
ctctggtggcagggcttgccccccaacgtcagaggaaaggtctggagcctagccatcggc
aacgagctcaacatcaccccagagctgtatgacatcttcctctccagagccaaggagagg
tggaggagtttcagtgagacgggttcagaggctgacgatggggcatcgctggcagacaga
gagtccagtctggacctgatcaagctggacatatcccgcacattcccacctctttttata
ttccagaagggtgggccatatcatgatctcctccacagcgtgctgggggcctacacctgt
tacagacctgatgtgggatatgttcagggcatgtccttcatagctgcagtgttaatcctc
aacctggaggaagctgacgccttcattgccttcgctaacctgctcaacaagccctgccag
ctggccttcttcagagtggaccatgatctaatgctgaaatactttgctgcgttcgaggtg
ttctttgaagagaacctccctagactgtttaaccacttccagatctccaacctcacccca
gatctctatctcatcgactggatcttcactctgtacagtaagtcgttgccgttggacgtg
gcatgtagagtgtgggatgtgttctgtcgtgacggcgaggagtttctgttccggacgggt
ctagggattctgcgtctctacgaggatgtgctcctacagatggatttcatccatagcgcc
cagtttctgacacgcctcccagaggatatagactctgataggctgttcgcctgcatcgtg
gccatgcccatgctcaacggaaacaagaaatggtcccaggtgtttaatgcattgataaag
gagaacaaggacatggacaggaattgcagccaagtactgaagagttcatga
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