Oncorhynchus tshawytscha (Chinook salmon): 112223475
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Entry
112223475 CDS
T05605
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112223475
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Ferlins
112223475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Pex24p
Motif
Other DBs
NCBI-GeneID:
112223475
NCBI-ProteinID:
XP_024242267
LinkDB
All DBs
Position
LG24:complement(19952099..19977069)
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AA seq
2067 aa
AA seq
DB search
MLRVVVESAKGLPKSKLGSTPDPIANIIFKDEKKKTKTIDSEVNPVWNEVLEFDLKGSVL
DSSSYIDVIVKDYETIGKDKFLGSAKISLKDLATGQVKSFPCKDLALVNEKGQATGATVS
LVIHYDPPANATPNPNDPQAGDAAGDSGRGEEGDEDIPDAGQSPSAPGQPGNPNQRLVKK
NRKLNRPLANKPQDFQIRVRILEGRQLPGNNIKPVVKVNVCGQTHRTRIKRGNNPFFDEM
FFYNVNMLPSDLFDQYVSIRVYDSFSLRADSLMGEFKVDVGFIYDEPAHSVMRKWLLLND
PDESSSGARGYLKVSMFIVGAGDESQVEKRDINDDQDDIESNLLLPAGVTLRWVTLSLKV
FRAEDIPQMDDAFIQSLKGMFGVDGDKKNLVDPFVEAHFAGKRLCTQVIEKNANPEWNQM
LNLQVKFPSMCERIKLTVFDWDRLTRNDSIGTIYLNLAKIASSGGEVQDKHAGYGFSPSL
EGKTGESEVGFLPAFGPCYINLYGSPREFTGLPDPYEELNYGKGEGVAYRGRILVELSTK
LEGKADKTVEEIPSDDILVAQKYQRRRKYCLCVVFHSASMLQEPGEPIQFEVSIGNYGNK
LDTTCKPLASTTQYSCAVFDGNHYYYLPWANAKPVVVITSFWEDISHRLDAVNIILYIAE
RLQSNITAMKLAILAKVPENRLAEIWLRLVNQVIEDLSSLKVPELEGHSNLTSLDIQMKK
LRDSTLQTIMEGAKSMREEATEIKDTLGDIEGWLDKLKQLAEEPQNSMPDVIIWMLRGEK
RVAYSRIPAYQLLYSTYSEQACGQFCGRTRNVFMQYPMDKNKGLKVPVQIRVNMWLGLSA
DEKKFNNFSEGTFSVFAELYENQAYMLGKWGTTGLGLRYKCSDVTGKLKLKQENFIPPRG
WEWEGDWFIDPEKGLLTEADAGHTEFMDEVFQNETRFPGGEWKPATEPYTDVNGEKTHTP
EEIECPAGWSWGDEWTVDENRAVDEKGWEYGITIPPDDKPKSWVPAEKMYHVHRRRRVIR
PRKRTSAAGTTTEKRDQGDPEGWEFSSLIGWKFHRQERSADTIRRRRWRRKMAPAGRLGA
SAIFKLEGALGVDVDEKKKDEVDASKLFGANTPTVSCSFDSSHLYHLRVYVYQARNLIAM
DKDSFSDPYAHVSFLHMSKTTETIKATLNPTWDQTLIFQDVEIYGDPQKIAQYPPDVVLE
FYDKDQVGKDELLGRSVCVPLVKLNPGMDQTPKLLWSPIIQKDQQAGEVLVAAELILKDK
GNETDLPLVPPKRAENLYMVPQGIRPVVQLMAIEILAWGLRNMKPYQLATVASPSLVVEC
GGEMVQSAVIKNMKKCPNFPGSVLFLKVLLPKEEMYTPPIVLKVIDHRPFGRKPVVGQCT
IDTLEEFRCDPYVIQKSSMSSKMALMAAFPHDTRIDMEDRRPLLEAQFVYSMSAAVNKMA
TTTSRLHAEKEKETVDWWSKFYASIGDHEKCRPYLQKGYDTLKVYDKELENVPEFKQLTD
FCNTFKLQRGKNEDEEDDPSVVGEFKGSFKVYPLSDDPGVAPPPRQFRELPESVPQECLV
RIYVVRGIDLQPKDNNGQCDPYIKISLGKKSIEDRDNYLPNTTNPVFGRMFEMSCFLPQD
KDLKISVYDYDLLTRDEKVGETVIDLENRFLSRFGSYCGLPQTYCISGINQWRDHLKPSQ
ILQNLARLKGVPPPRLEDDGKALSFNGTQYTLAQFEANKEIHQHLGPADERISLHVLRTH
GLVPEHVETRTLFSSFQPQLSQGCLQMWVDVFPKNMGLPGPPFDIVPRKAKKYFLRAVVW
NTSDVILDETSITGERMSDIYVKGWMPGMEEDKQKTDVHYRSLDGDGNFNWRFVFGFEYL
PAEQLCLVSKKEHFWSLDKTEFRIPPKLIVQIWDNDKFSLDDYLGTVELDLRKLTPPAKV
SKTCNLSMMEEVMDARPPKSDLANSLFAQKSVRGWWPCVTEQDGKKVLGGKVEMTLEIVS
EKEVDEKPAGKGRDEPNMNPKLDFPKRPDTSFFWFTNPCKTMKFIVWRRFKWLFIGLILL
ILVLLFVGILLYSLPNYISMKIVKPFK
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggttgtggtagaatctgcgaaaggtctgcctaaaagtaaacttggaagtact
ccggatcccatagcaaatattatttttaaagatgaaaagaagaaaaccaaaacaattgac
agtgaagtcaacccagtttggaatgaagtccttgagtttgatttgaagggttctgtgctt
gattcctcatcttacattgatgtgattgtgaaagactacgaaactattggaaaagataag
tttctcggctctgcaaaaatctcactgaaagaccttgcaactggtcaagtcaaatccttt
ccatgtaaagatctggctcttgtcaatgaaaagggacaggctactggggccacggtgagc
cttgttattcattatgatcctccagccaatgccaccccaaatccaaatgacccacaggca
ggagatgctgcaggggattctggtagaggtgaagagggggatgaggacatccctgatgca
ggacagagtccctctgctcctggtcagcctgggaaccctaaccaaagactggtcaagaaa
aacaggaaattgaaccgtcccctggccaataaacctcaggactttcagatccgtgtcagg
atattagagggacgacagctccctgggaataacatcaaacctgttgtgaaggtgaatgtt
tgtggacagactcacagaacaaggatcaagcggggaaacaatcccttctttgatgagatg
ttcttttacaacgtcaacatgttaccatcggacctatttgatcaatatgtcagcattcgg
gtgtacgactccttctctctgagagctgacagtctcatgggggagttcaaggttgatgtt
ggcttcatctatgatgaaccagctcactctgtaatgaggaagtggctcctcctgaatgac
cctgatgaatccagttcgggcgccagaggataccttaaagtcagcatgttcatcgttggg
gcgggagacgaatcacaggtagagaagagggacattaatgatgaccaggatgacatagag
agtaacctgctgctgccagcaggggttacactgcgatgggtcaccctgtctctcaaagtg
ttccgggccgaggacattccccagatggatgatgcctttatccagtcattgaaggggatg
tttggagtggatggggacaagaagaatctagtggatccttttgtcgaggctcacttcgct
ggcaaaaggctgtgcacccaagtcattgagaagaatgccaacccagaatggaaccaaatg
ctgaatcttcaggtcaagttcccctccatgtgtgaacgaatcaaactgaccgtctttgat
tgggatcgcctgacgaggaatgactcgattggcaccatatacttgaatctggccaaaata
gcatcctctggtggcgaagttcaagacaaacatgcgggatatgggttctcgccatcactt
gaagggaagactggggagtctgaggtgggtttcctgccagcctttgggccttgctatatc
aacctgtatgggagtcccagagagttcactgggcttcctgacccctacgaagagctcaac
tatggcaaaggtgaaggggtggcctatcgaggaagaatcctggttgagctgtcgactaaa
ctggaaggcaaggctgacaagactgtagaagagatccctagtgatgacatcttggtggcc
cagaaataccagcgcaggaggaagtactgtttgtgtgtagtgttccatagtgccagcatg
cttcaggaacctggcgaaccaatccagtttgaggtcagcattggcaactatggcaacaag
ctggacactacctgtaaacccctggcctccactacccagtacagctgtgctgtgtttgat
ggtaaccactactattacctgccctgggctaatgccaaaccagtggttgtcattacatca
ttctgggaggacatcagtcaccgtttggatgcagtcaacatcattctgtacatagctgaa
cgtctgcaatctaacatcactgcgatgaagttggccatcttggctaaagtccccgaaaac
cgtctggctgagatctggctgaggctggtaaatcaggtgatcgaggacctcagcagtttg
aaagtgccagagctggagggccactcaaacctgacctccctggacatccagatgaagaag
ctacgtgacagcaccctgcagaccatcatggagggggccaagagcatgagagaggaggcg
actgagatcaaggataccctgggggacattgagggctggctggacaaactgaagcagctc
gctgaggagccccagaacagcatgcctgacgtgatcatctggatgctgaggggggagaag
agagtggcgtacagccgcatcccagcctaccagctgctctactccacctacagcgaacag
gcctgtggacagttctgtggcaggaccaggaatgtcttcatgcagtaccctatggataaa
aacaagggtctgaaggttccagtccagatcagagtcaacatgtggctgggcctgtctgca
gacgagaaaaagttcaacaatttctcagaagggacgttcagtgtgtttgctgaattgtat
gagaatcaggcctacatgctggggaagtggggaactaccggtctgggtttacgctacaaa
tgctctgatgtgactggcaagctgaagctgaaacaagagaacttcattcccccgcgaggc
tgggagtgggagggagactggttcatagacccagagaagggtctgttgacagaggcagat
gcgggacacactgagttcatggatgaagtcttccagaatgagactcgcttccccggggga
gagtggaagcctgccactgagccctacactgacgtgaatggggagaagacccacacacca
gaggaaattgagtgtcctgcaggctggagctggggggatgagtggaccgtagatgaaaac
agggctgtggacgagaaaggctgggagtatggaatcaccatccctccagatgacaaaccc
aagtcttgggtgccagcagagaagatgtaccacgtccaccgacggaggagagtgatcagg
cccaggaagagaacatcagctgctggtacaaccactgagaaacgagaccaaggagaccca
gaaggctgggagttctcctctctgattggctggaagttccacaggcaggagcgttctgcc
gacacgatccgacgcagacgttggaggaggaaaatggcccctgctggccgcctgggggca
tccgccatattcaaactggagggggcgctgggggttgatgtagatgagaaaaaaaaagat
gaggttgatgcctccaagctctttggtgccaatactcctactgtgtcctgttcgtttgac
agctcacacctctaccaccttcgcgtctacgtttaccaggccaggaaccttattgccatg
gacaaagacagcttctcggatccatatgcccatgtgtccttcctgcacatgagtaaaacc
acagagaccataaaagctaccctgaaccccacgtgggaccagaccctgatcttccaggat
gtggagatctacggggacccgcagaaaatcgcccagtatccccctgacgtggtgctggag
ttctatgacaaggaccaggtggggaaagatgagctattgggccggagcgtgtgtgtcccc
ctggtgaaactgaaccccggcatggaccagacccccaaactgctgtggtcccccatcata
cagaaggaccagcaggctggagaggtgctggtggctgctgagctcatcctgaaggataag
ggtaacgagacggacctccctctggtccctcccaagagggcggagaatctgtacatggtg
cctcaggggatacggcctgtggtgcagctcatggctattgagattctggcctgggggttg
cgcaacatgaagccctaccagttggccactgtggcctcccctagccttgtggtagagtgt
ggaggggagatggtccagtctgctgtcatcaagaacatgaagaagtgccccaactttcct
ggatctgtcctcttccttaaagtgcttcttcccaaagaggagatgtacacccctcccatc
gtgctgaaggtgatcgaccacaggccatttggcaggaagccagtggttggacagtgtacc
atagacactctggaggagtttcgctgtgacccctacgtcatccagaagtcatccatgtcc
tccaaaatggctttgatggctgcttttcctcacgacaccagaattgacatggaagacagg
aggcctctgcttgaagctcagtttgtgtacagcatgtcagcagcagtcaacaaaatggcc
accactacttctcgtcttcatgcagagaaggagaaggagacagttgattggtggagtaaa
ttctacgcttccattggagatcatgagaagtgccgtccttaccttcagaaaggatatgac
actttgaaggtgtatgataaggaactggagaatgttcctgagttcaaacaactcaccgat
ttctgcaacaccttcaaactgcagagaggcaagaatgaagatgaggaggatgatccatct
gtcgttggagaattcaagggctcttttaaggtgtaccctctatcagacgacccgggtgtg
gctcctcctcctcgccagttccgtgagctgcctgaaagcgtgcctcaggagtgcctggtc
aggatctatgtggtcagaggcatcgacctgcagcccaaggacaacaacggtcagtgtgat
ccctatataaagatttccctgggaaagaagtcaattgaggaccgagataactacttacca
aataccaccaaccctgtttttggaagaatgtttgagatgtcatgttttctgcctcaagac
aaagacctgaagatctcagtgtatgactatgatctgctgacacgcgatgagaaagtggga
gagacagtgattgacctggagaaccgcttcctgtcacgttttggctcctactgtggcctg
cctcagacatactgcatctctggaatcaaccaatggcgtgaccatctgaagccctctcag
atccttcagaacctggcccgcctcaaaggcgtccctccacccaggttagaagatgatggc
aaagcactgtcattcaatgggactcagtacaccctggctcaatttgaggccaacaaagag
atccaccagcacttgggtcctgccgacgaacggatctctctgcacgtgctcagaacacat
ggactggtgcctgagcatgtggagacaaggacactgttcagcagcttccagccccaactt
tctcagggatgccttcaaatgtgggtggatgttttccccaaaaacatgggccttcccgga
cctcccttcgacattgtgccacgcaaggccaagaagtatttcctgcgagctgttgtttgg
aacacctctgatgtcattctggacgaaactagtattactggggagcgcatgagtgatatc
tacgtcaaaggctggatgccaggtatggaggaggacaagcagaagaccgacgtccactac
aggtctctggacggggacggcaacttcaactggaggttcgtctttggctttgaatacctg
cccgctgaacagctgtgtctggtctccaagaaggagcacttctggagtctagacaaaaca
gagttcaggataccccccaagttgattgttcaaatttgggataatgacaagttctcattg
gatgattacctgggcacggtagagctggatctccgtaaacttacccctccggccaaggtt
tcaaagacgtgcaatctgagtatgatggaggaggtgatggacgcacggccacccaaatcc
gacctggccaattcgctgttcgctcagaagtctgtcagaggctggtggccatgtgtcact
gaacaggatgggaagaaagtccttggtgggaaggttgagatgactctggaaatcgtgtct
gagaaggaagtggacgaaaagcctgctgggaagggcagggatgaacccaacatgaaccca
aagcttgacttccctaagcgtccggacacgtccttcttctggttcacgaacccctgtaag
accatgaagttcattgtgtggcgcagattcaagtggcttttcattggactgatcctactg
attctagtgctgctcttcgtcggaatcctgttgtactctttaccgaactacatttcaatg
aaaattgtgaagccattcaaatga
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integrated database retrieval system
