Oncorhynchus tshawytscha (Chinook salmon): 112223617
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Entry
112223617 CDS
T05605
Symbol
tap2t
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010
ABC transporters
otw04145
Phagosome
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112223617 (tap2t)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112223617 (tap2t)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112223617 (tap2t)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112223617 (tap2t)
Enzymes [BR:
otw01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
112223617 (tap2t)
Transporters [BR:
otw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
112223617 (tap2t)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
Rad17
AAA_16
AAA_29
SbcC_Walker_B
ABC_ATPase
Lectin_N
Motif
Other DBs
NCBI-GeneID:
112223617
NCBI-ProteinID:
XP_024242475
UniProt:
A0A8C8MEN2
LinkDB
All DBs
Position
LG24:15205354..15218704
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AA seq
713 aa
AA seq
DB search
MAYLKTYGLVLLYDLVLWGALWTGLVLLEFSSSGGLVGLWAFGALRWALHHSITLVLSER
KPQPVLRRWVAVLCLLPPVFESGRMVMVPASTADDLGLVPGPSMVVLALVSSTVACLAWE
LGFPDDGGNQGKEKKKKQEARAQLMRVVRYCKPDTLYLAAAFLFLSLAVICETFIPYYQG
KVIDTLSGQYQHNSFMYAIGGMGLVSLGSALCSGLRGGLFMCSLSRLNKRMRHMLFHNLV
QQDIPFFEENKPGSLVSRLGYDVDKMGRSVALNSNVLVRSLVKTAGMLFLMLGLSWQLTL
LTMVEMPLLTLLQTKYNTYNQEFIKQLQDCQAQIKELASQAIGAVRTVRSFRAEEKEQDR
YNQALERMYKVQEHKGIISAIHLLLRRVVTVGLKVAMLFLCRRLISAGQLSIGSVLAFVL
FQKDMVTNMKQLVYVFGDMLCTVGAAAKVFTFLDRKPDQKEAGELAPAKLQGKLAFHHVS
FYYPSRQNTPALKAVSLELHPGKMTALVGPSGGGKSSCVSLLARLYEPMEGQVLLDGQPL
HCYQHQYLHQKMALVSQEPVLFSGSIRHNIEYGLVGCTLEKVKEAAKSANIHDFICTLEQ
GYDTDVGECGGQLSSGQKQCIAIARALVREPRVLILDEATSGMDINTQHAVQGVLAGSVG
LTVLVVAHRLQTVEKADHIIFMEGGEVVEQGTHQELMASKGRYRRLKEKLFED
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcttatttaaaaacatatgggctggtccttctctatgacctagtgctgtggggggca
ctgtggactgggttagtgctacttgagttctccagtagtggaggactggtggggttatgg
gcctttggagccctaaggtgggcattgcaccactcaatcaccctggtgctttctgaaaga
aagccacagccagtgctgaggagatgggtggcagtgctctgcctcttacctcctgtgttt
gaaagtggacgtatggtcatggtgccggcatcgactgccgacgacctgggtctggtgcct
ggcccaagcatggtggtcttggccctggtatcctccactgtggcctgcctggcatgggag
ctgggcttccctgatgatggagggaaccaagggaaggagaagaagaagaaacaggaggcc
agggcacagttgatgagggtggtgcgatactgcaaaccagacaccctctacctggctgca
gccttcctcttcctcagcctggctgtcatctgtgagacgtttatcccttactaccagggg
aaggtcattgatacactgagtggtcagtaccagcacaacagcttcatgtacgccattgga
ggcatgggactcgtctcactaggaagtgctctgtgctcaggcctgcgagggggcttgttc
atgtgtagcctgtccagactcaacaagaggatgagacacatgctgttccacaacctggta
caacaggacatacccttctttgaggagaacaaaccaggaagccttgtctcacgcctcggc
tatgatgtggacaagatgggacgctctgtggctctgaacagtaatgtgctggtgcgcagc
ctggtgaagactgctggtatgctgttcctgatgctgggcctgtcctggcagctcaccctg
ctcaccatggtggagatgcccctcctcaccctgctgcagaccaaatataacacatacaac
caggagttcattaagcagctgcaggactgccaggcccagatcaaggagctggcatcccag
gccattggggcggtgagaacagttcgcagcttcagagctgaggagaaggagcaagatagg
tacaaccaagcactggagaggatgtacaaggtccaggagcacaagggcatcatcagtgcc
atccaccttttactgagaagggtggtgacagtgggcctaaaggtggccatgctgttcctg
tgtcggaggctcatctcggctggccagctgagcattggcagtgtgctggcttttgtcctc
ttccagaaagacatggtgaccaatatgaagcaacttgtgtatgtctttggagacatgctg
tgcactgtcggggcggcagccaaggtgttcacatttctggacagaaagccagaccagaaa
gaagcaggagagctggctcctgcaaagcttcaggggaaacttgctttccaccatgtcagc
ttctactatccctcacgccaaaatacacccgcactgaaggctgtgagtctggaactgcat
ccggggaagatgacagcgcttgtggggccctctggtggcgggaagagctcctgcgtcagc
ctgctggcgaggttgtatgagcccatggagggccaggtgctgttggatggacagcccctg
cactgctaccagcaccagtacctgcatcagaagatggccctggtgtcccaggaaccagtg
ctcttctctggatctatcagacacaacatagagtacggcctcgtgggatgcaccctggag
aaggtgaaagaggctgcgaagagcgccaacatccacgactttatttgtacgctggaacag
ggctacgacacagatgtaggtgagtgtggagggcagctgtcttctggacagaagcagtgc
atcgccatagccagagctctggttcgagagccacgggtcctaattctggacgaggcaaca
agcggcatggacatcaacacacagcatgcggtgcagggcgtcctggcaggctcagtgggc
ctgacagtgttggtggtggcccaccggctgcagactgtggagaaggctgaccacatcatc
ttcatggagggcggggaggtggttgagcagggcacacaccaggagctcatggctagcaag
gggcgctaccgtcggctcaaagagaaactctttgaggactga
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