Oncorhynchus tshawytscha (Chinook salmon): 112223623
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Entry
112223623 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112223623 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112223623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112223623
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112223623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
112223623
NCBI-ProteinID:
XP_024242482
LinkDB
All DBs
Position
LG24:15048511..15121783
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AA seq
1691 aa
AA seq
DB search
MSQSGKVLHLYVEVRSAPEQDGNGGLGGGVEGPGTGSNSASAQDGPAGLLSKLTCQTKCQ
TPTKVQTHRLAHNFTHTQSPSRHTVSFQLHQGNGNQSPSISKRQSLPAALTHSPAFSRNG
RTTTPHKLSSKGQGLGGDAKRSVVTFSYIEKANVKRVESPQNSACQRRSREERSSPPSNP
RKRLSDPIWLGSPGSSCSSSPKLAFRPPGCIQQQQQPSVSPSHCHPVLDSVGRAATQLAL
EEFGFGSPLHRSKILHGLEQSPRGSRHNQQAGCLSWAGGSPVPRHSACNNHAMDTDRNRA
ICGPLPRSPASDQLSSHASQAALGMSPNSRPRLCMGPKAQSPHQWEGQDKAITGSPATQR
QVHKPCNSSSSPQGTILQLSNKLGVGTVLNQLSGRKPSSPSNSPEVARRLAEEATKVSSI
LAEVRRNSLTLHSTLDEVESPNCGCMSREANSSVPKAQLQHLQHQKVKMNIPLHGLHTPA
SNNTDSQQAGNSLPSSRTQDTNTPTLTNHRTQHGGGWALGQSSILSDAVVGGGVSPALPS
RFLRPFLPPAETSSPLRDPRLLRAQLRVTDSPTLHRCQPPQYTGDFWSFEPDRTADLSCF
DRGDSAELARRLYIRQSVEEAPVSWTSRQPWSHLAGEESSSSSSSPRHGPGPGQQPLSTA
QQKRAEQRRREVLLLGPVVLDSPEEDEGLDGDGEGEGEEVSGQGQQPSLLRVEEPQGGER
IGIAGSSSRSSSGVTGSLGERECVSPESSQSSHQSNETGAATSGIQTDSGTAVPGPSLHS
QRIARAKWEFLFGTPDEEAASRGEKSTIEPSTAPPSGQSSESPTSPISLPLISANHEVQH
VEVELVTPPPAAVGESPKTGIVRGTLKYSETDLDAVPLRCYRETDIDEVLLAEQEDTDSA
FGSNRSVKSTSGTGSSPLGVCPYERTSGEEEEVEGEEEEEEEDDEEDEEEVVSWVSVRMQ
GDIKRQQQQQVISQLLKRPLDSFFDNLPALKSPILVSGPRLAGTTEDTFSRHFESIMESH
RAKGTSYCSLDSEELLTSSTQTVLTFDLPTLTPEIQGGQMICQSARHIVKLSFAPLAHCE
RGTSLSDSIVTVTGDSDATRAPSSERLSSGSEDTIPRGGGGGARMLGSSWYSNPTFSFPR
SVMSYSSNPSLSFHREKARLATDSELDQDLSERLGLGSSDTLTNGNRADGEAAKRLAKRL
FTLDGFRKSDVARHLSKNNDFSHKVAEEYLHFFNFTGLNVDQALRALLKQFSLMGETQER
ERVLSHFSRRYLHCNPILIPTEDGVHTLTCALMLLNTDLHGHNIGKRMSCTQFIDNLEGL
NEGQDFPKDLLKALYNSIKNEKLQWTIDEEEMRKSFSELGDTNQADSTSKHMKSMASSEK
HLVTMAQPSGALLYKNGFLVRKVHADSDGKRTPRGKRGWKTFYGILKGLILYLQKGEYRP
DKQLSDEDLKNAVSIHHSLAMRAADYSKRPNVFYLRTADWRVYLFQAPNAEQMQSWITRI
NTVSAMFSAPPFPAAIGSQKKFARPLLPGSTSKLSQEEQVQSHEARFRAISTELAELRSY
PPDRKVKGRELEEYRQRDEYLEFEKTRYGTYAMLLRAKIRCGEDDLSVFEAQILEDNGLQ
RAHSSPTLQDSSQASQASQGSSTKEPVGCSGIGKGSKRTEGQRYSYRQAVKKFVNVIECS
MLRPGCSAVGS
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtctggaaaagtccttcatctgtacgtggaggtaaggtcagccccggagcag
gatgggaatgggggcttggggggaggagtggagggtcctgggactgggagtaactcagcc
tcagcacaggatgggccagctgggcttttgtccaagctaacctgccagacaaaatgtcag
actcctaccaaagtacaaacgcaccgcctagcccataacttcactcacacccagtctccc
tccagacacacagtgagcttccagctccaccaaggcaatggcaaccagtcacctagcatc
tccaagcggcagagtttaccagcagcactgacccactccccagccttttccagaaatggg
aggaccaccaccccccacaaactctcctccaaagggcaggggttggggggtgatgccaaa
cgctcggtggtcaccttcagctacattgagaaggctaacgtcaagagagtggagagccca
cagaactctgcctgtcagaggaggtctagggaggagaggtcatccccaccttccaacccc
cggaagagactcagcgaccccatctggttgggtagtcctggctcctcctgcagctccagt
cccaaactagcgtttcgtcccccagggtgtatccagcaacaacagcaaccgtcagtttcc
cccagccactgccaccccgtcttggattccgtcggcagggcagccacccagcttgccctg
gaagagtttgggtttggttcccccctgcacaggagtaagattctccatgggctcgagcag
agtcccaggggctcccgccacaaccagcaggccggttgcctgtcatgggcaggcggctct
cctgtcccacgccacagcgcctgcaataatcacgccatggacacagatagaaaccgggcc
atttgcgggccattacccaggagcccagcctccgaccagctttcgtctcatgctagccag
gccgctctgggtatgtctcctaactcgagacccaggttgtgtatggggcccaaggcccag
agcccacaccaatgggaaggtcaggacaaagctatcacagggagtccagccacccagaga
caagtacacaagccctgtaacagcagttcctcccctcaagggaccattctccaacttagc
aataaactaggggtgggaactgtactgaaccagctaagtggtagaaaaccctcctcacca
tccaacagccctgaagtggcccggaggctagctgaggaggctactaaagtgtcctctatt
ttagcagaggtaaggaggaactcattgacattgcacagcactttagacgaagtagagagc
cccaactgtggatgtatgtccagagaagccaacagttctgtcccaaaagcacaactgcaa
catttgcagcatcagaaagttaagatgaacatccctttacacggcctacacacaccagca
tccaacaacactgactctcaacaggctggaaactctttaccatcgtcacgcacacaggac
acaaacactccaacactaaccaatcataggacacagcacggaggagggtgggctctgggt
cagagctccatcctatcagacgcagtagtgggtggaggagtgtccccagccctgccttca
cgcttcctccgtccatttcttcccccagccgagaccagctcccctctgagggaccccagg
ctgctgagagcccagctcagagtcaccgacagccccacgctgcaccgctgtcagccccct
caatacactggagatttctggtccttcgagccggacaggacagccgacttgtcctgcttc
gacaggggggacagtgccgagctggcccgtaggctctacatacgccagagtgtggaagaa
gcccctgtcagctggacttccaggcagccctggagccacctggcaggggaggagagcagc
agctccagttccagccccagacatggacctggacccggtcagcagcccttgagcacggcc
cagcagaagagggctgagcagaggagaagggaggttctgctgctgggccctgtggtgctg
gactccccagaggaggacgagggcctggatggggatggggaaggggaaggggaggaggtt
tcgggacaagggcagcagccaagcctgctgagggtggaggagcctcaagggggggagcga
attggaatagcggggtcctcgtcgcgcagctccagcggggtgacgggcagcctaggtgaa
agggaatgtgtgtccccagagtccagtcagtccagccaccagagcaacgagacaggggct
gccacttcagggatacagacggacagtggcactgcagtcccaggcccctccctccactcc
cagaggatagctcgtgccaagtgggagttcctattcgggacacccgatgaggaggctgcc
agcaggggggagaaaagtaccatcgaaccctccacagctcctcccagtggccagtccagt
gaatcccccacttcccccatctccctccccctcatctcagccaatcacgaggtgcagcac
gtggaggtagagctggtgactcctcccccagcggcggttggggagtcgccaaagacgggc
atcgtccgggggaccctcaagtactcggagacggacctggatgccgtgcccctgcgctgc
taccgcgagaccgacatcgatgaggtgctattggctgagcaggaggacaccgactcagcg
tttgggagtaaccgcagcgtgaaaagcacatcgggtacaggcagcagccccctgggtgtc
tgtccctatgagagaacgagtggggaggaggaggaggtggaaggagaggaggaagaggag
gaggaggatgacgaggaggatgaggaggaggtggtgagctgggtctcagtgaggatgcag
ggggacattaagaggcagcagcagcagcaggtgatcagtcagctgctgaagaggccattg
gacagtttcttcgacaacctcccggccctcaagtcgcccatcctggtttcgggtcctcgt
ctggcaggcacgactgaggacaccttcagccgccattttgagagcataatggagtcacat
cgcgccaagggcacatcctactgcagcctggacagcgaggagctgctgacctccagcacc
cagacggtcctgacctttgaccttcccacactgaccccagagatccagggcggtcagatg
atctgtcagagcgcccgacacattgtcaagttgagcttcgccccactggcccactgtgag
aggggaacaagcctatcagattccatcgtcacagtgacaggtgactcagatgccacgcgc
gccccctccagcgaaaggctgagcagtggctcggaggacacaatcccgcgagggggaggg
ggtggggcacggatgttggggagcagctggtacagcaaccccacattctccttccctagg
tcagtgatgtcatacagcagcaacccctccctctccttccacagggagaaggctcgtctg
gcgacagactcggagctggatcaggacctcagtgagcggctgggactggggagcagcgac
accctcaccaacggtaaccgtgctgacggagaggcggccaagcgcctggccaagcgcctc
ttcaccctggacggcttcaggaagtccgacgtggcccgtcacctcagcaagaacaatgac
ttcagtcataaggttgcagaggagtatctacacttctttaacttcacaggtcttaatgta
gaccaggctctaagagccttactcaagcagttctccctgatgggagagactcaggagagg
gagcgggtgctgtctcacttctccaggagatacctgcactgtaacccaatactcatacct
actgaggatggtgttcataccttgacctgtgccctgatgctgctaaacacagacctgcat
ggccataacattggcaaaaggatgtcctgcacacagttcattgacaacctggagggtctg
aatgagggtcaagactttcccaaagacttgctgaaggccctgtacaactcaatcaagaat
gagaagcttcaatggacaatcgatgaggaggagatgcggaagtctttctcggagctgggg
gacaccaaccaggctgattccacctctaaacacatgaagagcatggccagcagtgagaaa
cacctagtgaccatggcccagccctcgggagccctgctgtacaagaatggcttcctggtg
cgcaaggtgcacgccgactcagatggcaagagaacaccgcgtgggaagagaggatggaag
acgttctatggcattctgaaggggctgattctctacctgcagaagggagagtaccggcca
gataaacagctgtcagatgaggatctgaagaacgccgtgtccatccaccactctctggcg
atgagggctgctgactacagcaagagacccaatgtgttctacctccgcaccgccgactgg
agagtctacctcttccaggcaccaaacgcagagcaaatgcagtcgtggatcacgcgcatc
aacacggtatcagccatgttctcagcaccacccttccctgcagccattggttcacagaag
aaatttgcccgaccgctgctgccaggctccacctccaaactgtcacaggaggagcaggtc
cagtcccatgaggctcggttccgggccatctccactgaactggctgagctgcgctcgtat
cctccagaccgaaaggtcaaaggccgtgagctggaggagtaccgccagcgggacgagtac
ctggagtttgagaaaacgcgctatggtacctacgccatgctactgcgggccaagatccgc
tgcggcgaggatgacttgtccgtattcgaggcccagatcctggaggacaatggcctgcag
cgcgcccactccagccccacactgcaggacagcagccaggccagccaggcctcccagggc
agcagcaccaaggagccggtgggctgcagcggtataggaaaaggctccaagcgcacagag
ggccagagatacagctaccgccaggccgtcaagaagttcgtgaatgtcattgaatgcagt
atgctgcgacctggctgttctgctgtaggttcgtga
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