Oncorhynchus tshawytscha (Chinook salmon): 112223646
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Entry
112223646 CDS
T05605
Symbol
itga3b
Name
(RefSeq) integrin alpha-3b isoform X1
KO
K06482
integrin alpha 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04810
Regulation of actin cytoskeleton
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112223646 (itga3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112223646 (itga3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112223646 (itga3b)
04810 Regulation of actin cytoskeleton
112223646 (itga3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112223646 (itga3b)
04515 Cell adhesion molecules [BR:
otw04515
]
112223646 (itga3b)
04090 CD molecules [BR:
otw04090
]
112223646 (itga3b)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112223646 (itga3b)
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin alpha subunits
112223646 (itga3b)
CD molecules [BR:
otw04090
]
Proteins
112223646 (itga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Collectrin
FG-GAP_2
Fer4_22
PsbJ
Motif
Other DBs
NCBI-GeneID:
112223646
NCBI-ProteinID:
XP_024242505
LinkDB
All DBs
Position
LG24:complement(14521714..14574934)
Genome browser
AA seq
1051 aa
AA seq
DB search
MAPSLYLHGALAVFCVTLTCNGFNIDSRFPVIKEGKTKGSFFGFAVALHKQTEGSTKYLL
LSGAPKEKALALRNVNETGAIYSCPVTTELNDCERMDLVSSTDSSEMVEGMWLGVTVASQ
RDLPGGRVLACGHRYVKVVRGGAEEQLRMVGKCYVRGNDLTFDPNDEWQDHSYEVCNPNF
DMELEGLCNMGISGGMTDTDVYIGSVGSYVWQGNVHVTWRDPDPGNAWDSSDKDFGQLNR
RYGYMGYSVNEDKKLLSQDYFTVVTGSPRDESKGSVMLAKKGNTALVTKFIIPGEQVGSY
FGNSLAVTDLNNDNWNDLIVGAPFYFDRQKEEGGAVYVFMNENGSFQKTPSMVLKGPTAS
GFGFAVAAIGDVNQDGFQDFAVGAPFHETGNVYIWMGSKKGISEEPSQVIEGKSVGSGGF
QTFGYSISGGMDMDENSYPDLLVGSLDDRIALLRARPVIHLSKNFTVLPEIVDPNLCPRG
NKSCVTVTVCFSYTLSNGNKDFKKNIMVKYTVEADMHRRSPRVLFLVNKLATYTGLLTMP
SPKTECQVLELRLEDPVRDKLEPVVFSLNVSLDEQKPKVRKALQNLDSYPVLSHKQKVTE
RKEINFQKECGSDNRCTSNLQLTAAFANELLKPYPSQGKRQLLQYSSNVKKVVLLVEITN
VPGPGKVAEDAHQAMLNISTPSTLRYSGVRSHDTGVECRAGETVMCELGNPLRSNEKVSL
QLIFETTGINLQTREIESQLLLSTLSEQNDLYPVSVALLIETSIQTSFSIENPLVQTYFS
GEVMGESAMNTTSDVGSLVEYTFKVSVEGEPLGALGILAVEFEWPFEVTSGKWLLYLTEI
VTKGTTETHCVPPGDIVNLLNLTLSKNRSKRPKRAVEGEHPRIIEPQAVLTVLTPRKETY
LLDCSKWTARCVTFTCPLINMSTSAKIIVRSRVWNSTMLEDYKNALRIKVRGQATLKLVT
DNPTIKMENETREFIVDIDPVLGVETPYEVPLWIIIVAVVAGILLLGVISIILWKCGFFR
RASRREMYEAKGQKAEMKSQPSETERLTEDY
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggccccaagtctatatctccacggggccttggctgtgttttgtgtgactctaacctgc
aatggatttaatatagactcacggtttccagttatcaaagaagggaaaaccaagggcagt
ttctttggatttgctgttgccttacacaaacagacggaagggtccacgaaataccttctc
ctgtcaggagcacccaaggagaaagccctggctctgaggaacgtcaatgagacgggcgcc
atctactcctgtcctgtcaccacagagcttaacgactgtgaaaggatggacttggtcagc
tccacggactcgtctgagatggtggaggggatgtggctgggagtgactgtggccagccag
agagacctgccagggggtcgagtgctggcttgtgggcatcgctacgtgaaggtggtgcgg
gggggcgcggaggagcagctgcggatggtggggaagtgctacgtcaggggcaatgacctg
accttcgaccccaacgacgaatggcaggaccacagctatgaggtgtgcaaccccaacttc
gacatggagctggagggcttgtgcaacatgggcatctcggggggcatgaccgacacggac
gtctacatcggctctgtgggcagctacgtgtggcaaggcaacgttcatgtaacgtggaga
gaccctgatccaggaaacgcatgggactcaagtgacaaagactttgggcaactgaacaga
cgatacggctacatgggttactctgtcaatgaggacaagaagctgctgagtcaagactac
ttcacggtagtgacggggtctcccagagatgaatccaagggctcagtgatgctggctaag
aagggcaacacagcgttggtgaccaagttcatcatcccaggagagcaagtgggctcgtac
tttgggaacagcctagctgtcaccgacctcaacaatgacaactggaatgacctgatcgta
ggtgccccattctactttgaccgtcagaaggaggagggaggagcggtgtacgtcttcatg
aatgagaacggctctttccagaagacacctagcatggtactgaagggtcctacggcatct
ggctttggattcgccgtggcagccattggcgacgtcaaccaagatggattccaagacttt
gcagtaggagccccattccatgagactgggaatgtctacatctggatgggaagcaagaag
ggaatctctgaggagcctagtcaggttattgaggggaagtcagtgggtagtggtgggttc
cagacttttggctattccatcagtggaggtatggacatggatgagaacagttaccctgac
ctcctggttggttctctggatgaccgcatcgctctgctcagggctcgtccagttatccat
ctctctaagaacttcaccgtgctgccagagattgtggaccctaacctttgtccccgtgga
aacaaatcctgtgtgactgtgacagtgtgtttctcctacacactcagcaatggaaacaaa
gatttcaagaaaaacatcatggtgaagtacacagtggaagccgacatgcatcgccggagc
cctcgagttctcttccttgtcaataagcttgccacctacacaggcctccttaccatgcca
tctcccaagaccgagtgtcaggtgctggagctcagactagaggatcctgtgagggacaaa
ctggagccggtggttttctccctcaacgtgtccctggatgagcagaaacccaaagttaga
aaggccctgcagaacctggactcctaccctgtactgagccacaaacagaaagtgactgag
aggaaagagatcaacttccagaaggagtgtggctcagacaacaggtgcaccagtaacctg
cagctaacagctgcgtttgcgaacgagttactgaagccttaccccagtcaggggaaacgc
caattgctgcagtacagcagtaatgtgaaaaaggtggtgctacttgtggagataactaac
gtgccaggccctgggaaggtagctgaggacgcccaccaggccatgctcaacatctccacc
ccctccacgctccgttactctggcgtgcgctcccatgatactggtgtagaatgtcgtgct
ggagagactgttatgtgtgagctggggaatccactgaggagcaatgagaaggtctctctg
cagctcatctttgaaacaacagggatcaacctccaaaccagggagattgagtctcagttg
ctgttgtccacgttgagtgagcagaatgacctgtacccggtgtctgtggctctgttgata
gagacctccatccagacctccttctccatagagaatcccctggtccagacctacttcagc
ggggaggtgatgggagaatcagctatgaacacgaccagtgatgtgggcagtcttgtggaa
tacaccttcaaggtgtcagtggagggagagcctctgggggcgctggggatcctggccgta
gagtttgagtggcccttcgaggtgaccagtgggaagtggcttctctacctgactgagatc
gtcaccaaggggacaactgagacccactgtgtccctccaggggacatcgtcaatcttctc
aacctcacattgtccaagaacaggagcaaacgtcccaagcgagcggtggagggcgaacac
cctcgcatcatcgagccacaggctgtccttaccgtgctgactcctcgtaaagagacctac
ctactggattgttcaaagtggacagcccgctgtgtgacgttcacctgtcccttgatcaac
atgtctacctctgccaagatcattgtgaggtcacgggtgtggaacagcactatgctagag
gactataaaaatgctttgaggattaaggttagaggtcaggccacactgaaacttgtgacg
gacaaccccaccatcaagatggaaaatgagaccagagagttcatagtggacattgaccca
gtccttggggtggaaacaccttacgaggttcccctgtggatcatcatcgttgccgtggta
gcaggaatcctgctgttaggagtcatcagcatcatactgtggaagtgtggcttcttcagg
agggccagcaggagggagatgtacgaggccaaaggccagaaggctgagatgaagagccag
ccctcagagacggagaggctgactgaggactactga
DBGET
integrated database retrieval system
