Oncorhynchus tshawytscha (Chinook salmon): 112223654
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Entry
112223654 CDS
T05605
Name
(RefSeq) high affinity nerve growth factor receptor-like
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04020
Calcium signaling pathway
otw04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112223654
04020 Calcium signaling pathway
112223654
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112223654
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112223654
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
112223654
Protein kinases [BR:
otw01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
112223654
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
LRR_8
ig
Ig_2
TrkA_TMD
LRR_5
C2-set_2
Ig_VEGFR-1-like_5th
Atypical_Card
C2-set_3
Motif
Other DBs
NCBI-GeneID:
112223654
NCBI-ProteinID:
XP_042162638
LinkDB
All DBs
Position
LG03:19733193..19762053
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AA seq
797 aa
AA seq
DB search
MAVGSAPWAAPLALVLLAITLAVPALGGCPSACRCSFAMLQCLEPNGIATIPTLALQESE
NVTEIYIENQADLENITEVDLANYRELKNLTVTFCRLAYISANAFQHNLKLQYVNLASNS
LEHISWKVFHFLPLLNLVLRDNPLECSCDIHWLQQWQLNDHSDLDNQPLHCLSNGHARRL
DSLVMENCTVPEVAIVHANTKVQEGGNLTFVCQVTGVPVPVVRWRTNKLLSRYTVQERFW
GSTLELELQLWNMSSEDNLHNLTCEAENRAGPGEEKVTLDIEFPAKIIFLHNAEQQHHWC
FPFKVDGNPEPTIRWLFNGSDLTEGRYTYTQFIPDTDDGSVKHGCLFLNKPTHLNNGLYT
IIVGNRLGVDQETATGKFMDNPFDPFDPEGIIPVPTNKSNEDVTENLESRVFGVSVAVGL
AVFACTFLLIMVLVINKCGQQSKFGIHRSSVLGTEDDLAVSLRFMNLGASPPSSDDSGMS
SFVENPQYFCGIFKDKDMCVQHIKRQDIVLKWELGEGAFGKVYLAECANLSPDSDKMLVA
IKTLKDANESTRQDFQREAELLTVLQHQNIVRFYGVCTDGEPLAMVFEYMRHGDLNRFLR
AHGPDAHILEEVKMPPLGQLTLPQMLNIAAQIASGMVYLASLHFVHRDLATRNCLVGDMG
EGLMVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRKFTTESDIWSFGVVLWE
IFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVHGLMQGCWQREPQQRLVIKDIHS
RLLALVKSPPIYLDILG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgggttctgctccatgggcagccccactggccctggtactactggcaatcacc
ctggcggtgccagccctgggagggtgcccatccgcctgccggtgctccttcgccatgcta
cagtgcctggagcccaatggcattgccactatacccacgttggcactacaggagagcgag
aacgtcacggaaatttacatcgaaaatcaagccgacctggagaacattacagaagtagac
cttgccaactatagagagttgaagaatctcacggtcacgttctgcaggctggcgtacatc
tcggcgaatgctttccaacacaacctcaagctccaatatgtaaacctggcatctaactcc
ctggagcatatcagttggaaggtgttccattttcttcccctgctcaacctggttttgagg
gacaacccccttgagtgctcctgtgatatccattggctgcagcaatggcagcttaacgac
cacagtgaccttgacaaccaaccgctacactgcctctccaatggccatgcccgacggttg
gactccttagtgatggagaattgcactgtaccggaggtcgccattgtccatgccaacacc
aaggtccaggaggggggcaacctgacatttgtgtgtcaggtgacaggagtgcccgtgcct
gtagtgaggtggcgcacgaataaactgctatctcgctatactgtacaggagaggttctgg
ggctctactttggagctggagctgcagctgtggaacatgtcctcagaagacaacctgcac
aacttgacctgtgaggcggagaatcgggccgggcctggggaagagaaagtgacgttggac
attgaatttccagccaaaatcatattcctgcacaacgccgagcaacagcaccactggtgt
ttcccctttaaggtggacgggaaccctgagccaaccatccgctggcttttcaacggctcc
gacctgaccgagggccgttacacctacacacagttcattcccgacacggacgatggctct
gtgaagcacggttgtctatttctcaacaagcccacccacctgaacaacggcctctacacc
atcatcgtggggaacagactgggcgtggaccaagaaacggccacgggaaagttcatggac
aacccatttgacccctttgatcctgagggcatcatcccagttcccaccaacaaatctaat
gaggatgtcactgagaacctggagagcagagtgtttggggtgtcggtggcagtgggtctg
gctgtgtttgcttgcaccttcctcctcattatggtactggtcatcaacaagtgtggccag
cagtccaagtttggtattcaccgttcatctgtcttgggaacagaggatgatcttgctgtt
tcattgcgtttcatgaacttaggggcgagccctccttcctctgatgactctgggatgtcc
agctttgtggagaacccccagtacttctgtggcattttcaaagacaaagacatgtgtgtg
cagcacatcaaaagacaggacatagttctgaagtgggaactgggtgagggggcgtttggc
aaagtctacctggcagagtgtgccaacctcagtccggacagtgacaaaatgctggtggcc
atcaagactctgaaggatgccaacgagtcgacccggcaggacttccagagagaggctgag
ctgctcacagtcctccagcaccagaacattgttcgcttctatggagtgtgtacagatggc
gagccactggcgatggtgtttgaatacatgagacatggagacctcaaccgcttcctcagg
gcgcacggtccagacgcccatatcctggaggaggtgaagatgcccccgctgggccagctc
actcttccccagatgctgaacatcgccgcccagatcgcctcaggcatggtctacctggcc
tcccttcactttgtgcaccgggacctggccacacgaaactgcctggtgggagatatggga
gagggtctgatggtcaagataggagactttggcatgtcccgggacatctacagcacagac
tactacagggtgggtgggcgtacgatgcttcctattcgctggatgcccccggaaagcatc
atgtacaggaagttcaccacggagagtgatatctggagctttggagtggtcctctgggag
atcttcacctatgggaaacagccctggtaccagctctccaacagcgaggccatcgagtgc
attacacagggccgggagctggagagaccacgaacttgccccaaggaggtacacggcctg
atgcagggctgctggcagagggagccccagcagagactggtcatcaaggatatccacagc
cgcctcctggccctggttaagagcccccctatctatctggacatcctggggtag
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