Oncorhynchus tshawytscha (Chinook salmon): 112223732
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Entry
112223732 CDS
T05605
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112223732 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112223732 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112223732 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
ig
Ig_DSCAM-DSCAML_C
Ig_2
V-set
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
112223732
NCBI-ProteinID:
XP_042164322
UniProt:
A0AAZ3SHE0
LinkDB
All DBs
Position
LG28:44824901..44903219
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AA seq
1474 aa
AA seq
DB search
MSASFHVKQHHHHSDKKQQHESISHHSSRSSFSQLSYAAHKRIQHSTIGVQQSFVESEKR
SEFIPSQLLPPRVKKYLAMDPDTNDVIGYIVPVFRTSHEFARGLVEVQEEVKEEGVGHVA
MRNLFSLETSSMETITVEKKSRKRHIRESADRLELSKKVEERAEFRKKQNSDNLTHPPEF
IVRPRGQTVWEGKTVKLHCTVSGWPKPRIAWYKNNVVIDEKAHPDKYTAESNYNMHSLEI
KSCDFLDTAQYRVSALNIKGESSSVATVVIKRFQEGQKVGTLDAKPHGFCSEHGVTFETA
IIDSFEVAFGREGETLSLGCTVIVYPTVKRYQPDVLWYRDGKALSESKWVHTHWSGEKAT
LTLVHLNKEDEGLYTLRVNTKSGFQSYSAYVFVRDEEVELEGVPVAPLDVRCHDANKDYV
VVTWKQPAVEGSSSILGYFIDRCEVGHHHWAQCNDTPVKYARFPVTGLIEGRSYTFRVRA
INRAGVSRPSRASDPVTAIDPHDRARHRAGPSAPFTGMIKFTEEDATVGVVPGEPTDLVV
TEATKNYVVLAWSPPAQRGHEGVVYLVEKCVAGSECWQRANTGMPVKSPRFALFDLAEGK
SYSFRVRCCNSAGMSEASSATGDITVGDMLDLPAAPGPAVATRNTDTSVVVSWGASKDVK
HLVGYYINYTVAGSDVWTPANNKPVKGTRFVCHGLNTGESCVFRVKAVNAAGYSHSSLES
EAVVVKAGIAIPGVPSGVHLMEAARDYMVLAWREPVVTGGADIRGYFVDYRTVKGGVGGQ
WHELNPKAVTCTSYKAENLKENLFYQFQVRAINMAGVSEASLPSAALECKEWTIAKPGAP
HDLHVLEVRDSSLVLLWEPPTFDGRTPVNGFYVDIKQAVAGEDWKGVHEKATKLKYMKVN
GLIAGRSYVFRVRAQNLAGVGKTSAVLGPVLALTMPGTHEIILDVDDDGVISMIFECSEM
AEGSEFIWSKNYKTLTDTSRLTIVTEGGKSRAIFNAPSLEDLGIFSCEVTNTVGVSASYT
LTEAGLKRLLDISHEHKFPIIPFKTQMAMELLEKGRVRFWTQVEKFTTGCHVDYVFNDAI
VENGEKYQMNFDKNSGIIEMFMDSLAVTDEGTFTFNLVDGKAKGSTSLVLIGEEFREIQK
KSEFEHAEWIRRQGPHFVDYLGFQVTPECNVLLKATIGNIRPETEIRWYKDGLEIEEDDA
DYKKIEMKDEVLIFNIGKLSKKDAGVYEVKLKDARGKDKSMFNLTEAGYQTVLNELFRVI
ANSSTEISVKSTEHGIVLYSLITYHMEDLQVGWLHKEAKIAHSDRVQCGVTGEQLWLKVN
EPTEKDKGKYTINICDGKDGVKRFCDLSGQAWEEAFVEFQRLKAAAIAERNRARVVGGLP
DVVTIQEGKSLNLTGNVWGDPAPEVTWMKNDRELVSDERYALKFEHGKFASITIAAVTTT
DSGKYALLVKNKYGTEAGEFTVSVYIPEEEKKKE
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatcgttccacgtgaaacagcaccaccaccacagtgacaagaagcagcagcat
gagagcatcagccatcacagctctcgctcctcttttagtcagctgtcatatgctgcccac
aagagaatccagcacagcaccataggagtgcagcagagttttgtcgaatcagagaagagg
tcggagttcatacctagccagctgctgccgccgagagtcaagaagtacctggccatggac
cctgacaccaacgatgtcattggatacatagttcctgtcttcaggaccagccatgagttt
gcccggggcctagttgaggtccaggaagaagtgaaggaggagggggtggggcatgttgcc
atgaggaacctgttctccctggagaccagctcaatggagacgattaccgtggagaagaag
agcaggaagaggcacattagagagtcagctgaccgcctggagctcagcaagaaggttgag
gagagagcagagttccgtaagaagcagaacagtgacaacctgacccatcctcctgagttc
atagttcgtccccgaggacagacagtctgggagggcaagactgtcaagctgcactgcacc
gtgtctggatggcctaaaccacgtattgcatggtataagaacaatgtggtgatagatgag
aaggcccatcctgacaagtacacagcagagagtaattacaacatgcactctctggaaatc
aagagctgtgacttcctggacacggctcagtaccgtgtgtctgctctcaacataaaggga
gagagctcttccgtggccaccgtggttatcaagaggttccaggagggacagaaagtggga
actcttgatgctaaaccacatgggttctgctcggagcacggtgtgacctttgagacagcc
atcatagactcgtttgaggtggcgttcggccgggagggagagactctaagtctgggctgc
accgtcatcgtctatcccaccgttaaacgctaccagcctgatgtcctctggtacagagat
ggcaaggccctgtcagagtccaagtgggtccacacccactggagtggagagaaagccacc
ctgacactggtccatcttaacaaggaggatgaaggactctacaccctgagagttaacacc
aagtctggcttccagtcctactccgcttacgtcttcgtcagagatgaagaggtggagttg
gaaggtgttcccgttgcgcccctggacgtacgttgccatgacgccaacaaggactacgtt
gtggtgacatggaaacagccggcggtggagggaagcagctccatcttggggtacttcatt
gataggtgtgaggtgggccaccaccactgggctcagtgtaacgacacccctgtgaagtac
gcccgtttcccagtaacggggctgattgaggggaggagctataccttccgagtcagagcc
atcaaccgggctggggtcagccgaccttctagagcctctgatcccgttaccgccatagac
ccccacgacagggctcgccatcgagctggtccctctgctcccttcaccggaatgatcaag
ttcactgaggaagacgctacagtgggcgtggtaccaggtgagcccaccgacctggtggtt
accgaggcaacgaagaactacgtggttctggcctggtctccgcccgctcaaagaggtcat
gaaggggttgtgtaccttgttgagaagtgtgttgctggtagtgagtgctggcagagggcc
aacacagggatgcccgtcaagtctcctcgcttcgcgctgtttgatctggcagaggggaag
agctacagcttcagagtccgctgctgtaactctgctgggatgtctgaggcctcctctgct
actggagatatcactgtaggagacatgctggacctgcctgcggcccccggcccagccgta
gccactaggaacacagatacatcagtcgttgtttcctggggggcgtctaaggatgtaaaa
cacctggtgggatattacatcaactatactgtggcgggcagtgatgtctggacacccgca
aacaacaagcctgttaaaggaaccaggtttgtgtgccacggtctgaacacaggagagtcg
tgtgtgttccgtgtgaaggcggtgaacgcagcagggtacagtcacagctctttggagtcg
gaggccgtggtcgtcaaggctggcatcgccatccctggtgtccccagtggagtccacctg
atggaggcagctcgtgactacatggtgttagcctggagggagccggtggtgaccggggga
gctgacatcagaggatactttgtggactacaggacagtaaagggtggagttggaggacag
tggcatgaactcaaccccaaggctgtcacctgtacttcctataaggcagagaacctgaag
gagaacttgttctaccagttccaagtgcgagccatcaacatggccggggtcagcgaggcc
tctctgcccagcgcagctctagagtgtaaagaatggaccattgctaagccaggtgctcct
catgatctccatgtgttggaggtgcgtgacagttccctggtgttgctgtgggaaccccct
accttcgatggccgtactcctgttaacggcttctatgtggacatcaagcaggccgtggca
ggggaggactggaagggagtacatgagaaggccaccaagttgaagtacatgaaggtcaat
ggtctgattgcaggcaggtcctatgtgttcagggtgcgtgctcagaacctggctggagtg
ggaaagacttctgctgtgttaggacctgttctggctctaaccatgcctggtactcatgag
ataatactggatgtggatgatgatggtgtgatctccatgatctttgagtgttctgagatg
gccgaggggtcagagttcatctggtctaagaactacaagactctgacagacacctccaga
ctcaccatcgtcacagaggggggcaagtccagagcaatctttaatgctcctagtctggag
gaccttggtatcttctcctgtgaggttaccaacactgttggagtctcagccagctacact
ctaacggaggctggtctgaagcgtctcctggacatcagccacgagcacaagttccccatc
attcccttcaagactcagatggccatggagctcctggagaagggtcgtgtgaggttctgg
acccaggttgagaagttcaccactggctgccatgtggactatgtctttaacgatgcgatc
gtagagaacggagagaaataccaaatgaactttgacaagaactcaggcattattgagatg
ttcatggactctctcgcggtcacagacgagggaacattcacctttaacctcgtggacggg
aaggccaaggggtccaccagcctggtgctgattggagaagagttcagagagatccagaaa
aagtctgagtttgaacatgctgaatggatcagaagacaaggtcctcacttcgtggactat
cttggtttccaggtcaccccagaatgcaacgtgctgctgaaggccacgataggaaacatc
aggccagagacagagatcagatggtacaaagacggactggagattgaagaggatgatgct
gattacaagaagatcgagatgaaggacgaggtgttgatcttcaacatcggaaagttgtcc
aaaaaggatgcaggtgtgtacgaggtgaagctaaaggatgccagaggaaaagacaagagc
atgttcaacctgactgaagcaggttaccaaactgtgctaaacgaactgttcagggtgatt
gccaactcatcaactgagatcagtgtgaagagtacagaacatggtatcgtcctctactcc
ttgatcacctatcacatggaggacctccaagtcggctggctgcacaaggaagcaaagatc
gcccactctgacagagtccagtgtggagtgaccggggagcagctgtggctcaaggtgaat
gagcccacagagaaagataagggcaaatacacaataaatatctgtgacggcaaggacggg
gttaagaggttctgtgacctgtctggacaagcctgggaggaagccttcgtagagttccag
aggctgaaggctgctgccattgcagagagaaaccgtgcccgggttgtgggaggtctgcca
gatgtggtcactatccaggagggcaagtctctgaacctgacaggcaacgtgtggggtgac
cctgcacccgaggtcacctggatgaagaacgacagagagctggtgtctgatgaacgctac
gccctcaagtttgaacacggcaagttcgccagcatcaccatcgcggcggtaaccacgacc
gactcagggaagtacgcactcctggtgaagaacaagtatggaactgaggcaggagagttc
actgtgtccgtctacatcccagaggaagagaagaagaaagagtag
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integrated database retrieval system
