Oncorhynchus tshawytscha (Chinook salmon): 112223751
Help
Entry
112223751 CDS
T05605
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00071
Fatty acid degradation
otw01212
Fatty acid metabolism
otw03320
PPAR signaling pathway
otw04148
Efferocytosis
otw04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
112223751
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112223751
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112223751
03320 PPAR signaling pathway
112223751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112223751
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
112223751
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112223751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
DUF4158
Motif
Other DBs
NCBI-GeneID:
112223751
NCBI-ProteinID:
XP_042161239
LinkDB
All DBs
Position
LG24:10914523..10953476
Genome browser
AA seq
783 aa
AA seq
DB search
MAEAHQAVAFQFTVTPEGIDLQLSHQALTEIYLSGLRSWKKKLIRLKNGVITGVYPASPS
SWLFVVIAILATMYMRSDPSMGLIAKIQEHLPVSQSLSAQCQTVVSAVLFSTLLWFSLIF
TMRMCLKQLLSYHRWMFEQRGKMSNTTKVWVALVRIFSGRQPLLYSYQGSLPNQPVPAVK
DTVKRYLESVRPLTTPDEFERMASLATQFESSLGNRLQWYLKLKALWASNYVSDWWEEYI
YLRGRSPIMVNSNYYGMDFLYVTPTPIQAARAGNTLHAFLMYRRKLNREELKPSRVPGTV
IPLCAAQCERMFNTTRTPGEETDTVQHWQDSDYVAVYHRGRYFRLRMYSSSRPLSPREIE
SQLQRILDDPSPPSPGEEKLGALTAGDRIPWAKARKEYFSLGVNKRSLDCIEKAAFFVTL
DDDEQGMMGEDPAASLDRYAKSLLHGKCYDRWFDKSFSVVIYKNGKIGLNAEHSWADAPV
VAHLWEYVLATDSFQLGYNEEGHCKGEVDASLPRPQRLSWDITPECQEQISQSLAVAQAL
ADDVDFHVFSFRDFGKGMIKKCRISPDAYIQLALQLAYYRDRGMFCLTYEASMTRLFREG
RTETVRSCSNESCAFIKALEGGEGVEVCRRLLRQASEKHQNLYKHAMTGAGIDRHLFCLY
VVSKYLGVDSPFLKEVLSEPWHLSTSQTPVQQVELFDMVNHPEYVSCGGGFGPVADDGYG
VSYTIMGENMMNFHISCKHSCSQTSSHKYGGQIRQALRDMLQLLCPDQREPSRTDQSQTK
KDL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcccaccaggccgtggccttccagttcacggtgactccggaaggcatcgac
ctgcagctgtcccaccaggccctcacggagatctacctctcgggcctgcgctcctggaaa
aagaagttaatccgcctcaagaatggtgtgataacgggggtgtacccggccagtccctcc
tcctggctgtttgtggtcatcgccatcctggccaccatgtacatgcgctctgacccctcc
atgggtctcatcgccaagatccaggagcacctaccggtcagtcagtctctgagtgcccag
tgtcagacggtggtgtcggcggtgctgttcagcacgctgctctggttctccctcatcttc
accatgcgcatgtgcctgaagcagctcctctcctaccaccgctggatgttcgagcagcgc
ggcaagatgtccaacacaaccaaagtctgggtggcgctggtgcggatcttctcgggcaga
cagcctctcctctacagctaccagggctctctgccaaaccagcccgtgccggccgtcaaa
gacacggtcaagaggtatctggagtcggtgcggccgctgacgacccctgatgagtttgaa
cgcatggcgtcgctggccacccagtttgagagcagcctggggaaccggctacagtggtac
ctcaaactcaaggccctctgggcttccaactacgtgagcgactggtgggaggagtacatc
tacctgagaggacggagccctatcatggtcaacagcaactactacggcatggacttcttg
tatgtgacgcccacccccatccaggctgccagagcaggcaacacccttcatgccttcctc
atgtaccgcaggaaactcaacagagaggagctcaagcctagtcgtgttccaggcactgtc
attcctctgtgtgcagctcagtgtgagaggatgttcaacaccacacgcactcctggagag
gagaccgacacggtgcagcactggcaggacagtgactatgtggcggtgtaccaccggggg
cgctacttccgtctgaggatgtactcatctagccggccgctgtcaccacgcgagatcgag
tcgcagctccagaggatcctggatgacccgtcgcccccctccccgggagaggagaagctc
ggggccctgacagctggagacagaattccctgggccaaggccaggaaggaatacttcagc
ttgggcgtgaacaagcggtcactcgactgcatcgagaaagcagcgttctttgtgaccttg
gacgatgacgagcaaggcatgatgggagaagacccagctgctagtctggaccgttacgcg
aagtccctgctccacgggaagtgttacgacaggtggtttgacaagtcattctccgttgtg
atctataaaaatgggaagatcggtctgaatgctgagcactcatgggccgatgcaccggtg
gtagcacacttatgggagtatgtgttggccacagacagtttccagctggggtacaatgaa
gagggccattgtaagggagaggtggatgcctctctaccccgacctcagagactgagctgg
gacatcaccccagagtgtcaggagcagatctcccagtctctggcggtggcccaggcgctg
gccgacgatgtggacttccacgtcttctctttccgggactttggcaagggcatgatcaag
aagtgccgcatcagtcctgacgcctacatccagctggcccttcagctggcctactacagg
gacaggggcatgttctgtctgacctacgaggcctccatgacccgtctgtttagggagggc
cggacagagactgtgcgctcctgctccaatgaaagctgtgccttcatcaaagccctggag
ggaggagagggggtagaggtgtgcaggagacttctccgccaagcctcagagaagcaccag
aacctgtacaaacatgccatgactggcgccggcatcgacaggcacctcttctgtctctat
gtggtctccaaataccttggggtggactctcccttcctgaaagaggtgctgtccgagcca
tggcatctctctaccagtcagactcctgtccagcaggtggagctgtttgacatggtcaac
cacccagagtacgtctcctgtggcggaggctttggcccggtggcggacgatggttacggg
gtgtcctacaccatcatgggagagaacatgatgaactttcacatctcctgcaaacactcc
tgctcacagactagttcccacaagtatggaggtcagatcaggcaggccctgcgggacatg
cttcagctactctgcccagaccaaagagaaccctctagaacagaccagagccagaccaag
aaggacctgtag
DBGET
integrated database retrieval system
