Oncorhynchus tshawytscha (Chinook salmon): 112223784
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Entry
112223784 CDS
T05605
Name
(RefSeq) caveolae-associated protein 1
KO
K19387
polymerase I and transcript release factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112223784
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
112223784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTRF_SDPR
DUF1664
DUF948
Motif
Other DBs
NCBI-GeneID:
112223784
NCBI-ProteinID:
XP_024242754
LinkDB
All DBs
Position
LG24:7431627..7456935
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AA seq
507 aa
AA seq
DB search
MEVETSSLHLELQEQQQTLTEISDDEVNLPPSDDEDFGAAKERSLVALAVSEGDQEEKEE
DKVGAQVNGVMVLALLDKIIGAVDQIQQTQSGLEARQQDMERSVTGIQGELTKLSKSHST
TSNSVNKMLEKVRKVSVNVKTVRANLEKQGGQIKRLESNENELLKRRNFKVMIYQDEVKI
PSKLTVSKSMKLSELVEGGRGSVLDLKEGAEENGEEGEEKPHLDLSSDEEELEIEDVIEE
SRAERIKRSSLQRVQNIKSAFSKEKMGLTKEKMTKTREKMGLTKEKMTLTKEKMGFNRQK
TNKENVEKIPKPNAKENFDKTKQHAKENFDKTKKNAKENFDKTKQKTKENLEKTRHNIEK
KMGKLGTRMSVNPEQKEKMKVSRQKVMKSFTPDHTVYARDKTAIYKVPPFTFHVKKFREG
AMEPVEVQGTEMVEVSQDLNPFQGLEDDCHEGRVDLDVDVDMMNGGGEEEGMEDEEEEEE
DEEDSHSLQEMHEDSEHVLVERDRDSD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggaaacatccagcctgcacttggagctgcaggagcagcagcagaccctcacc
gagatctcagacgacgaagtcaacctgccaccgtcggatgacgaagactttggtgccgcc
aaggaacgttcgttggtggcgctcgccgtgtccgagggtgaccaggaggaaaaggaagag
gataaagtgggcgcccaggtgaacggcgttatggtcctggctctgttggacaagatcatc
ggggcggtggaccagatccaacagacgcagagtggcctggaggctcggcagcaggacatg
gagcggtcagtgacggggatccagggcgagctcaccaaactgtccaagagccacagcacc
acgtccaactcagtcaacaagatgctggagaaggtgcgcaaggtgagcgtcaatgtgaag
acagtgcgtgccaacttggagaagcaagggggtcagatcaagaggctggagagcaacgag
aacgagctgctgaagaggcgcaacttcaaagtcatgatctaccaggacgaggtgaagatt
ccctctaaactgaccgtgtcaaagtccatgaagctctcagagcttgtggagggaggacga
ggcagcgtgctggacctgaaagaaggagccgaggagaacggagaggagggagaagagaag
ccccacttggacctctcctctgacgaggaggagctggagatcgaggacgtcatcgaggag
tcgcgcgccgagcgcatcaagcgtagcagcctccagcgcgtacaaaacatcaaaagcgcc
ttctctaaggagaagatgggcttgaccaaggagaagatgaccaagaccagggaaaagatg
ggcttgaccaaggagaagatgaccttgaccaaggagaagatgggcttcaacaggcagaaa
accaataaggagaacgtggagaaaatcccgaagccaaatgccaaagagaatttcgacaag
accaaacaacacgccaaagagaatttcgacaagaccaaaaaaaatgccaaagagaacttc
gacaagaccaagcagaagaccaaggagaacctggagaagacgcgccacaacatcgagaag
aagatgggcaagctgggcacgcgcatgagtgtcaacccggagcagaaggagaagatgaag
gtgtcgcggcagaaggtgatgaaatcctttacccccgaccacaccgtctacgcccgcgac
aagaccgccatctacaaggtgcctcccttcaccttccacgtcaagaagttccgcgagggg
gccatggagcccgtggaagtccaggggacggagatggtggaggtatcccaggacctgaac
ccttttcagggactggaggatgactgccacgaggggcgtgtggatctggacgtggacgtg
gatatgatgaatggaggaggagaggaggaagggatggaggatgaagaggaagaggaagag
gacgaggaggacagccattccctgcaggagatgcacgaggactctgagcatgtgctggtg
gagcgggatagggacagcgactag
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