Oncorhynchus tshawytscha (Chinook salmon): 112223801
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Entry
112223801 CDS
T05605
Symbol
ifnphi4
Name
(RefSeq) interferon phi 4 isoform X1
KO
K05414
interferon alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04217
Necroptosis
otw04620
Toll-like receptor signaling pathway
otw04621
NOD-like receptor signaling pathway
otw04622
RIG-I-like receptor signaling pathway
otw04623
Cytosolic DNA-sensing pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112223801 (ifnphi4)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
112223801 (ifnphi4)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112223801 (ifnphi4)
04621 NOD-like receptor signaling pathway
112223801 (ifnphi4)
04622 RIG-I-like receptor signaling pathway
112223801 (ifnphi4)
04623 Cytosolic DNA-sensing pathway
112223801 (ifnphi4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112223801 (ifnphi4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112223801 (ifnphi4)
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Interferons
112223801 (ifnphi4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF2262
Motif
Other DBs
NCBI-GeneID:
112223801
NCBI-ProteinID:
XP_024242780
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All DBs
Position
LG24:complement(7041335..7044536)
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AA seq
124 aa
AA seq
DB search
MDDHKFIQHSETLMNLLNIMGGEFTTDSVDIPFPEDLYEQAEYLPTDDTIWFILQTLDKI
AELFDGELDSVWDEKKVEIFLNVLTSQSDGLQSCVRAQKKNSKNLQMYFKRLNNHVLKRM
VSFY
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcacaaattcatacaacacagtgagaccttaatgaacctactcaatattatg
ggtggggagtttactacagacagtgtggacatacctttcccagaggacctgtacgagcaa
gcggaatatttaccaactgatgacacaatttggttcatcctccaaacccttgacaagatc
gctgagctgtttgatggagaactagactctgtctgggatgagaagaaagtggagatcttc
ctcaatgttctcaccagtcagtctgatggccttcagtcatgtgttagggcccagaaaaaa
aatagcaagaatctgcaaatgtacttcaagaggctcaacaaccatgtccttaaaagaatg
gtgagtttttattga
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