Oncorhynchus tshawytscha (Chinook salmon): 112223827
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Entry
112223827 CDS
T05605
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112223827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
otw03051
]
112223827
Proteasome [BR:
otw03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
112223827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
PRS7_OB
nSTAND3
RuvB_N
TIP49
AAA_3
AAA_18
AAA_28
Mg_chelatase
NPHP3_N
AAA_33
AAA_14
AAA_17
Parvo_NS1
ATPase
FapA
IstB_IS21
PhoH
AAA_24
AAA_7
AAA_25
DUF815
Sigma54_activat
ABC_tran
bpMoxR
RNA_helicase
DUF5906
APG6_N
AAA_11
DivIC
AAA_19
Zeta_toxin
HR1
TsaE
Motif
Other DBs
NCBI-GeneID:
112223827
NCBI-ProteinID:
XP_024242842
LinkDB
All DBs
Position
LG24:5602239..5624017
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AA seq
407 aa
AA seq
DB search
MALDGMDHHMEMEDSKGGSGLRQYYLSKIEELQLTVNDKSQNLRRLQAQRNELNAKVRLL
REELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRND
SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALG
IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR
EHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID
ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV
KGVCTESGMYALRERRVHVNQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggacggaatggaccatcatatggagatggaggacagtaaaggtggttctggt
ctccggcaatactacctgtctaaaatagaagagttacagttgacagtgaatgacaaaagt
cagaatctcagacgtctacaggctcagaggaatgaactcaatgcaaaagtgcgtctcctt
cgtgaggagctgcagttgctacaggagcaaggttcatatgttggagaggtggtgagggcc
atggacaaaaagaaagtgctggtcaaggtccatccagaggggaaatttgtggtggatgtg
gataagaacattgacatcaatgatgtgactccaaattgccgtgtggcgctgcgcaatgac
agctacaccctgcacaagatcctgcccaacaaggtggacccgctggtctcgctcatgatg
gtggagaaggtacctgactccacctacgagatgattggtggcctggacaagcagatcaag
gagatcaaggaagtgatcgagctgccagtcaagcacccagagctcttcgaggctctcggc
attgcacagcccaagggcgtgctgctgtacggacccccaggcacagggaagaccctgctg
gccagagccgtggcccaccacaccgactgcacctttatcagggtttctggctcggagctg
gtgcagaagtttattggggagggtgcccgcatggtgcgtgagctgttcgtcatggcccgt
gagcatgcgccctctatcatcttcatggacgagattgactcgatcggctcctcacgtctg
gaggggggcagcgggggcgacagcgaggtgcagaggaccatgctggagctgctgaaccag
ctggatggcttcgaggccaccaagaacatcaaagtcatcatggccactaaccgtattgac
atcctggactctgccctgctccggcccggccgcatcgacaggaaaatagagttccctcct
cccaatgaagaggctcgtttggacatcctgaagatccactcaaggaagatgaacctgacg
cgtggtattaacctaaggaagattgcagagctgatgccaggagcctccggggctgaggtt
aagggtgtgtgcacagagtccgggatgtacgccctcagggagaggagagtgcacgtcaac
caggaggactttgagatggctgttgccaaggttatgcagaaggacagcgagaagaacatg
tccattaagaaactctggaagtag
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