Oncorhynchus tshawytscha (Chinook salmon): 112223830
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Entry
112223830 CDS
T05605
Name
(RefSeq) nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112223830
03021 Transcription machinery [BR:
otw03021
]
112223830
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
112223830
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
112223830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DHC
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
112223830
NCBI-ProteinID:
XP_024242848
LinkDB
All DBs
Position
LG24:5543173..5559495
Genome browser
AA seq
548 aa
AA seq
DB search
MDFTEEEEMETSDKEQAWGREDLITLLHGIKENIPKGDMSIYTKGERTLEWDKVAFGPYS
PQMCHQKWKELSKKMRKVRSLAELVTEAEVAFENPFQGQNWKIHPDFPKRPTPSNSIFSK
ENFKKFEKQFPEMTPPELFKLMNEKYSELPEHKKAKYIAKFQKEKEMYEKRMRKLRKEYS
GGKKVQRDCLKNIKGPLTPHGLWYRHERREFLLANPGARRDCIRQSIVQKMRWSKLPDEE
KLKWINRSLEQPTPYEEEDMEEHPENKGSRKAKHKPLLRKSERLLKDLADGKPDKPPSKG
YNLFCKEQKANIQGEGLPNTQYLVICSQRWKKMTKSQKEAYQRRCDELKKEYEVNMNQFL
CTVTDKERILLENRKSMQTSTLAAQKGTKNKFQGEPKKPPERGHAVFYSEKMAELRAKSS
HLSFRTCMTMVSPLWKKLAQKEKEHYQRIAQERAREYQVELRSWFNTLSTKEQAKYSDQN
PNKLKILDNPEQRWMAKKGRTSDSEDDNIDTSSDEDDSDEDAEHMMEKENWSGCSSISSS
SEEDSDTE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggactttacagaggaagaagaaatggagacaagtgataaagaacaagcctggggtagg
gaggacctgataacgctcctgcatggtatcaaagaaaacattcccaaaggtgacatgagt
atttacactaaaggggagaggacactggagtgggacaaggtggcttttggtccctactct
ccacagatgtgtcatcagaagtggaaggaactatcaaaaaagatgcgcaaggttcgttct
ctagcagagctggtcactgaagctgaggttgcctttgaaaaccctttccagggccagaac
tggaagatacaccctgacttcccaaagagacctaccccgtcaaacagcatcttctccaaa
gagaactttaaaaagtttgagaagcagtttcctgaaatgacacctcctgaactctttaag
ttaatgaatgagaagtatagtgagctcccagagcacaagaaggcaaaatatattgcgaag
ttccagaaagagaaggaaatgtatgagaaacgcatgaggaagttgaggaaagagtactct
ggggggaagaaggtacagagagactgtttaaagaacataaaagggcccctcacaccccac
gggctctggtaccgccacgagaggagggaattccttctagccaacccaggtgccagaaga
gactgcatcaggcagagtattgtgcagaagatgcgctggtccaagctacctgacgaggag
aaactcaagtggatcaatcgctctctggagcagccgacaccgtatgaggaggaggacatg
gaggagcacccagagaataaagggagtcggaaggccaagcataagccacttctacgcaag
agtgagaggctgttgaaggacttggcagacggcaaacctgacaaacccccatcgaagggt
tacaaccttttctgtaaggaacagaaagccaacatacagggagagggactccctaacacc
cagtatttggtgatttgctcccagcgctggaaaaaaatgacaaagagtcaaaaggaagcc
taccagagacgctgtgacgagttaaagaaagaatacgaggtcaacatgaaccaatttttg
tgtactgtgacagataaggagcgcattctattggagaacaggaaaagcatgcagacctca
acgttggctgcacaaaaagggacgaaaaataagtttcaaggcgagcctaagaaaccacct
gagcggggtcacgcagtattttacagcgagaagatggcggagctgagagccaagtcgagc
cacctcagcttcaggacgtgcatgaccatggtcagcccactgtggaagaagctggcccag
aaggaaaaggagcactaccagagaatagcccaggagagggctagggaataccaagtagag
ctacgcagctggtttaataccttgtccacaaaggaacaggcaaagtactctgatcaaaac
ccaaataaattgaaaatcctcgacaacccagagcagagatggatggcaaagaagggcaga
acatcagactcggaggatgacaacattgacacatccagtgatgaagatgactctgatgag
gatgccgaacatatgatggaaaaggagaattggtcagggtgctccagtattagctccagt
tctgaagaggactccgatacggaatga
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