Oncorhynchus tshawytscha (Chinook salmon): 112223839
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Entry
112223839 CDS
T05605
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like isoform X4
KO
K03252
translation initiation factor 3 subunit C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
otw03012
]
112223839
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
eIF-3
112223839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
EIF3CL_C
Motif
Other DBs
NCBI-GeneID:
112223839
NCBI-ProteinID:
XP_024242864
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All DBs
Position
LG24:complement(4003026..4083162)
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AA seq
1013 aa
AA seq
DB search
MSRFFATGSDSESEDSSLSDEITPKVPGTTFTKQSLLLRDDEEDTKRVVRSAKDKRFEEL
TNLIKTIRNAMKIRDMSKCLEEFEQLCRAFLKSKTIVDKEGMPPFYIRLLSDLEDFLNQL
WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDYETEIASYKENPMVSADEEDEKDEVESGV
SSDSDDEPGDAKSFLKKKPAAEALLPDSSKFLMGAADEESSSSSDVDDEDWDSDTAESGS
GSEDEEGNNAIAKIFLKKSGSEVERHTSEKKKEDRKKRHKRKERVEEEAEEEAQEEDEGE
WEKVKGGVPLVKMFAKGTEINTTVVVKKLNEILQARGKKGTDRAAQIELLHALANISNEN
ILGEGILVKIKFNIIASLYDYNPNLAAFMKADMWKKCLDCIDELLDILFNNNNIFIGENI
AEDSENLAIIDSQPFRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVDNLKDEGRVCGII
DRLLGYLETKGSTEEVCRVYLRRIMHTYYKFDYKAHRRALGLQGETKSEQDAEESEGEDS
AFIMDRLCKFIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQHADPP
VQILYNRTMVQLGICAFRQGMIKDAHNALLDIQSSGRAKELLGQGLLMRNMQERNAEQEK
IEKRRQVPFHMHINLELLECVYLVSAMLLEIPYMAAHEFDARRRMISKQFHHQLRVGERQ
PLLGPPESMREHVVAASKSMKMGDWRTCHSFIINEKMNSKVWDLFPETQCVREMLVRKIQ
EESLRTYLFTYSSVYDSISMETLKEMFELELPMVHSIISKMIINEELMASLDQPTQTVVM
HRTEPTSLQNMALQLAEKLGGLVENNERVFDLKQGVYGGYFNRDQKGYQQKQGGYNRDQR
GSYQQKQGGYNRDSQRGGYQQKQGGYNRDRGGYQQRQGGYNRDGGDYQPRQGSYNRDGNR
GGGGYQGQNRGGYQGGGGGYQGGGGGYQGGGGGYQGGGGGYRGGYQNQDRRDY
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtttctttgccaccggttccgacagcgagtctgaggattcctcgttgtctgat
gagatcacccctaaagtacccggcactacttttaccaagcagtcattgctgcttcgtgac
gatgaggaagacaccaagagagtggtgcgtagtgccaaggacaagaggttcgaggagcta
actaacctaatcaagacgatccgcaacgccatgaagatccgagatatgtccaagtgtctg
gaggagtttgagcagctatgccgagcattcctcaaaagcaagactatagtggataaggaa
gggatgcctcccttctacatccgtcttctgtccgacctagaagactttttaaatcagctt
tgggaggacaaagaaggcaagaagaagatgaacaagaacaacgccaaagcactcagcacc
ctgcggcagaagatccgcaagtacaacagggactacgagacggagattgccagctacaag
gagaacccaatggtctctgcggatgaggaggatgagaaggatgaggttgaatcgggggtg
tcgtcagatagtgatgacgagccgggagacgccaagagcttcctgaagaagaaaccggcc
gccgaggcacttctgccggacagcagcaagttcctgatgggagcagcggatgaggagtct
tccagcagcagtgatgtggatgacgaagactgggactcagacacagcggaaagcggcagt
ggtagtgaagacgaagagggcaataacgccattgccaaaatcttcctcaagaagtctggt
agtgaggtcgagcgacacaccagtgagaagaaaaaggaggataggaagaagagacacaag
cggaaggagcgtgtggaggaagaggcagaggaagaggcccaagaggaggacgaaggagaa
tgggagaaggtgaagggaggagtgcccctcgttaagatgtttgccaagggaacagaaatc
aacacaacagttgttgtaaagaaactcaacgagattctgcaggcccgtggaaagaaggga
acagacagagctgcccagatcgagcttctccacgccctggccaacatctccaatgagaac
attctgggcgagggcatcctggtcaagatcaagtttaacatcatcgcctccctgtacgac
tacaaccctaacctggccgccttcatgaaggctgatatgtggaagaagtgtctggactgc
attgacgagctgctggacatcctctttaacaacaacaacatctttatcggcgagaacatt
gccgaggacagcgagaacctggccattattgactcacagccattcagggtgcgcggctgc
attctgaccttggtggagaggatggacgaggagttcaccaagatcatgcagaacactgac
ccccactctcaagagtacgtggacaacttgaaggacgaggggcgtgtgtgcggcatcatc
gaccgcctgctgggctacctggagaccaagggcagcacggaggaggtgtgccgcgtctac
ctacgccgcatcatgcacacctactacaagtttgactacaaggctcaccgccgtgccctg
ggcctccagggagagaccaagtctgagcaggatgcggaggagagtgaaggcgaggacagt
gccttcatcatggaccgcctgtgcaagttcatctacgctaaggaccgcacagaccgcatc
cgcacatgtgccatcctgtgccacatctaccaccacgcacttcactcgcgctggtatcaa
gcccgtgacctgatgctcatgagccacctgcaggataatattcagcacgctgacccgcct
gtacagatcctgtacaacagaaccatggtgcagctggggatctgtgccttccgccagggc
atgatcaaggatgcccacaatgccctgctggacatccaatcgagtggccgcgccaaggag
ctgctgggccagggcctgctcatgaggaacatgcaggagaggaacgccgagcaggagaaa
atcgagaagaggcgacaggtgcccttccacatgcacatcaacctggagctgctggagtgc
gtgtacctggtgtctgccatgctgctggagatcccctacatggcggcccacgagtttgac
gcccgccgcaggatgatcagcaagcagttccaccaccagctgagggtgggcgagaggcag
ccccttctgggacccccagagagcatgcgtgagcacgtggtcgcggccagcaagtccatg
aagatgggcgactggcgcacctgccactcattcatcatcaacgagaagatgaacagcaag
gtttgggatctattccctgagacgcagtgcgtgcgagagatgcttgtcaggaagatccag
gaggagtctctgaggacttacctgttcacctacagcagtgtttatgactccatcagtatg
gagacactgaaggagatgtttgagctggagctgcccatggtgcacagcatcatcagcaag
atgatcatcaacgaagagctcatggcatccctggaccagcccacccagacggtggtgatg
caccgcacagagcccacctccctgcagaacatggccctgcagctggcagagaagctgggt
ggcctggtggagaataacgagcgcgtctttgacctcaagcagggagtctacggcggctac
ttcaacagagatcaaaaaggctaccagcagaagcagggtggctacaacagagaccagaga
ggcagttaccaacagaagcaaggcggttacaaccgagacagtcagagaggcggctaccaa
cagaagcaaggaggttacaacagagacagaggcggttaccaacagaggcaaggcggttac
aaccgagacggaggagattaccaaccgaggcaaggcagttacaaccgagatggaaaccga
ggcggtggtggctaccaggggcagaacagggggggctatcagggtggtggtggcggctat
cagggtggtggtggcggctatcagggtggtggtggcggctaccagggtggtggtggcggc
tacaggggaggctaccaaaaccaggacaggagagactactga
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