KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112223852
Entry
112223852         CDS       T05605                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-2-like protein
  KO
K23625  ataxin 2/2L
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otw03019]
    112223852
Messenger RNA biogenesis [BR:otw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112223852
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM14
Other DBs
NCBI-GeneID: 112223852
NCBI-ProteinID: XP_024242899
LinkDB
Position
LG24:3463058..3518660
AA seq 1016 aa
MLKQQPSSCGRKTSNWTPGPASMSSTASGINNRAQVGRSRTSVKPPFLSSPVFEGVYNNA
RMIHFLTAVVGSTCDVRVKNGNVYEGIFKTLGSRCELAVDAVHKRGEDERPALPRREEIT
DTMVFSSYDVVTMTCRDVDLNYATRDTFIDTSISSTRVNGEDKEKVLQRWEGGDGNGEAF
DLENDAANGWDANEMFRYNKVNFGVESTYDSSLSMYTVHLERGSTEGFQQREARAALMAS
EIESSPQYRQRVSLENEEGKSEEDKCSAVVRGGERGGGSPREREKGCDSPSIVSREGKYI
PLPQRAREIGASGGSMQGERERAERGPGGGSGGPQGHNRMSAGYRSAPPSSSSPKPHLPL
ATGGPQPPPPSSECSSPLSGRGYSPPLPGQPWHCQPLRPYLPWGPASANAAPSSASPPXP
HSNSLSPSDTGRPVNGVSSRMSPKLQRPAQSNRPVRTPNSHTQSTASRSPKSGSQDSVQY
LDTSSVSMPAQKTSGLAPLFPIDVNEILCMAAKERSAESPGTTEDGKSKAPSIQQRSQIE
ELRKFGKEFRLQPSGCGSSAAAVSPSDTAKSFPSYPSPATSDSKQTLAPQSTSQPSASPS
GDPAKEPSSSAAATTASPISDRQLPGQSQSARTPGSEESRQEKAERVEGVIDQVRKSTLN
PNAKEFNPNKVALTLTKPNPSPTPPRPPPPSPAVVLQHPGSQGPIYNAPYLSYISQIHSV
QPPHMYQYTMSTVCQGKYPRVKGLGLGAPRSDHGNSGPPQAMLQAAGSAAGAPLVPSPYP
QPYLQYSQQQVIQAMTPYPGQPMYSMLQGGARLLGQGGSHPQVMGPPGGPQFPGQGEGPL
VPQQGIYAPQSFSHHQGAVHQPRPSSTPTCNHPPPQQHAPSPGQSGPQTQSLYHSGALSA
PTPSNIPPGQTSPQGSFPLQGYSLHGHQGIPHTYPGLGQITQAHVQGALQGPHHQGQHGH
PQVVMLQAPPPQHGLGQVSQHPQHGLQQGAHQHFYIGHPQAMQVQTHPSPFHPPGN
NT seq 3051 nt   +upstreamnt  +downstreamnt
atgttgaaacaacagcccagctcatgtgggcgaaaaacatccaactggactccgggccct
gccagtatgtcttccacggccagtggaatcaacaacagagcacaggttgggaggagtcga
acctctgtgaagccacctttcctgtcctctcctgtgtttgagggcgtctacaacaatgcc
agaatgatacatttcctcacagctgtggtgggctccacctgtgacgtaagagtgaagaac
ggcaacgtgtacgagggcatcttcaagaccctcggctcacggtgtgagctggcagtggac
gcagtccacaagcgaggcgaagacgagaggcccgccctgccccggagggaggagatcacc
gacaccatggtcttcagctcttacgatgtggtcaccatgacctgccgagacgtggaccta
aactacgccaccagagacacgttcatagacacgtccatcagctcgacccgtgtcaacggg
gaagacaaagagaaggtgctgcagaggtgggagggaggagatggcaacggagaggccttc
gatttggagaacgatgctgccaacggttgggatgccaacgaaatgtttcgttacaacaag
gtgaacttcggcgtcgagtctacctacgactccagcctctcaatgtacacggtccatctg
gagaggggcagcacagagggcttccagcagcgggaggcacgtgccgccctcatggctagt
gagatcgagtccagcccccagtaccgccaacgcgtctcgttggagaacgaggagggcaag
agcgaggaggacaagtgcagcgcagtggtgcgcggtggcgagcgggggggggggagcccc
agggagagggagaaaggctgcgacagccccagcatagtcagcagggaaggcaaatacatt
ccgttaccccagcgagctagggagattggcgcgtcggggggcagcatgcaaggagaacgc
gagcgggcggagcgaggccctggaggaggaagcggcggaccccaaggtcacaaccgcatg
agcgccggctaccgctcagcccctccctcctcttcctcccccaaacctcacctgcccttg
gccactggtggaccccagcctcctcccccgtcttcggagtgcagcagccccctctctggc
cgaggttactccccccccctcccagggcagccctggcactgccagcccctacgcccctac
ctcccctggggtccggcctcggccaacgccgccccctcttcagctagtcccccanncccc
cattccaactcgctgtctccgtcggacactggtaggcccgtcaacggagtgtcttctagg
atgtctcccaaattacagagacccgcccagtcaaaccgaccggtccggacacctaactca
cacacccagtccacagcctcccgctccccgaaatctggctcgcaggactcggtgcagtac
ctggacacgtcatctgtctccatgcccgcccagaaaacatcaggcctcgccccgctcttc
cccatcgacgtgaacgagatcctctgcatggctgccaaagaacgatcagcagagagtcca
ggcaccacggaagatggcaagagtaaagctccctccattcagcaaaggtcacaaattgaa
gagctgcggaaattcggcaaagaattcaggcttcagcccagcggatgtggctccagtgct
gcagcggtatctccctctgacacggccaagtccttcccctcgtaccccagccccgccacc
tcagactccaaacagaccctcgccccccaaagtacttcccagccctccgcttccccctca
ggggaccctgccaaggagcccagttccagcgcagccgctaccaccgccagccccatttca
gacaggcaattgccaggacaatcccagtcagccaggaccccaggaagtgaggagtccaga
caggagaaggcagagcgagtggagggtgtgattgatcaagtcaggaagtcaactctgaat
cccaacgccaaagagttcaacccaaacaaagtcgcgctcactctgacgaagcccaaccct
tcacccacgcctccccggccaccccctcccagccctgcggtggtgctgcagcacccaggc
agccagggtcccatctacaacgccccctacctctcctacatctcccagatccactctgta
cagcctccacatatgtaccagtataccatgtctacagtctgccagggtaaatacccccga
gtcaaaggcttagggttgggggccccccgctcggaccatggcaactctggcccgccgcaa
gccatgctacaggcggcagggtctgcagccggagcccccctggtgccgtcgccctacccc
cagccctacctgcagtacagccagcagcaggtcatccaggccatgacgccttacccagga
cagccaatgtactccatgctgcagggcggtgcgaggttgttgggccagggagggagtcac
ccccaggtcatgggacctccagggggcccccagttccccggccaaggtgaggggcctctg
gtgccacagcagggtatctatgccccccagtcgttctcccatcaccagggtgcagtgcac
cagccccggccctccagcacccctacgtgtaaccatccccccccccagcagcacgccccc
agccctggacagtcgggaccccaaacccagtctctatatcactccggggcgctctcagcc
cccaccccttctaatattcccccgggacaaacatcgccccagggctcgttcccccttcag
ggctacagcctgcatggccaccagggaatcccgcacacgtaccccggtctggggcagata
acacaggctcacgtccaaggggccttgcagggaccccaccaccagggccaacatggccac
ccgcaggtagtgatgctccaggccccgcccccccagcacggccttggacaagtctcccag
cacccccaacacggcctccaacaaggggcccaccaacacttctacataggacatccacaa
gcgatgcaggtacagacgcacccctctcccttccaccctcctggaaactga

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