Oncorhynchus tshawytscha (Chinook salmon): 112223883
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Entry
112223883 CDS
T05605
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112223883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112223883
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
112223883
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
Motif
Other DBs
NCBI-GeneID:
112223883
NCBI-ProteinID:
XP_024242958
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Position
LG24:complement(2471532..2504857)
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKAEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWENSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTDKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NAAEILILADLHSADQLKTQAVDFINYHAAEVMETAGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagtcccgagtccccctccccctgcggaaatgtccagcgggcctgtggcggag
agctggtgctacactcagatcaaagtggtaaaattctcctacatgtggaccatcaacaac
ttcagcttctgtcgcgaggagatgggcgaggtcattaagagctccacgttctcctcagga
gccaatgacaagctcaaatggtgtctgcgggtgaaccctaaagggctagatgaggagagc
aaagactacctgtccctctacttgctcctggttagctgtcccaaggctgaggtgcgtgcc
aagttcaagttctccatcctcaacgccaagggagaggagaccaaagccatggaaagccag
agagcatatcggtttgtccaggggaaggactggggctttaagaagttcatccgccgagac
ttcctgttggacgaggccaacggtcttctgcctgacgacaagctcaccttgttttgtgag
gtgagtgtggtgcaggactctgtgaacatctcgggtcagaacaccatgaacatggtgaag
gtgcctgactgcagactggctgatgagctgggcgggctgtgggagaactcgcgcttcacc
gactgctccctgtgtgtggccgggcaggagttccaggcccacaaagccatattagcagca
cgctctcctgtcttcagtgccatgtttgaacatgagatggaagagagcaaaaagaaccga
gtggagatcaatgacgtggagccagaggtcttcaaggagatgatgtgtttcatctacaca
gacaaggcccccaacttggacaagatggctgatgaccttctagcagccgctgacaagtat
gctcttgagaggctgaaggtgatgtgtgaggatgcgctgtgcaccagtctgtctgtggag
aacgctgcagagatcctcatcctggcagacctgcacagcgccgaccagctcaaaacacag
gctgtggacttcatcaactaccatgctgccgaagttatggagacggcgggctggaagtcc
atggtggcatcccatcctcacctggtagccgaagcctaccgctcgctggcctcggcccag
tgccccttcctgggaccgccccggaaacgcctcaaacagtcttaa
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