Oncorhynchus tshawytscha (Chinook salmon): 112223928
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Entry
112223928 CDS
T05605
Name
(RefSeq) myomesin-2 isoform X1
KO
K24495
myomesin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112223928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112223928
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112223928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
Pur_ac_phosph_N
C2-set_2
C2-set_3
NeA_P2
Motif
Other DBs
NCBI-GeneID:
112223928
NCBI-ProteinID:
XP_042162204
LinkDB
All DBs
Position
LG25:complement(35306566..35345365)
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AA seq
1430 aa
AA seq
DB search
MAATVARHKHVHVSHDCHSAQSKVVAKQYTSSEVVEDDYHHKQETRIQGVVRKKMVEKYV
REESMIRGPQFLTTLRSHTVWEHTPVKLYCTVEGYPTPLVKWYKDGVSIDMSSIKYNVQD
NVGIHTLEIAKCETDDTAQYTAVAGNIHGQVSTQASVIVKRIREEGHSSSYAWLPYTIPM
LPEIKYTKINITFLETFGSVFGTEGDTVTLAATMTATPNLANLQPEAQWFRDDHRLSDSK
WVKIESARGETKLTLPHLNKDDEGVYSLRMVTKGGDAVHSAFVSCADGPPPVPGAPGAPM
DIKIHDANRDYVIVSWKPPNTTTEGPIIGYFVDRCETGSENWVQCNDSPIKICKYPVPGL
FEGHSYYFRVRAINSHGISKPSRISDPIAALDPTEFERLHAIKLGGKLDVVIYHHDVEDG
KKIPGTPSKLHASETDRTYVVLSWKPAPYQGQAPVWYYIEKCLAESGAWQRVNTQVPVRS
PRYAVFDLSEGKQYLFRVLAANMYGSSEASEPTEPIQTQELRGVPSAPGQVVATRETDTS
LLIQWAEPKEPNNLIGYYIDVCVKGSKDWGSANHKPHKNNKFVVQGLTTGETYTFRVQAI
NELGLSDESQESSPLSVKAALTTPSAPYDIALLACDGESMVLNWKHPVHSGGSPVVEYYI
DKHRHGEHTWREINIPPIKERLFKVEHLSAGAVYEFMVYGGSLAGLGAPSAPSKAFHCDA
WTIPEPGPAYDMTFCEIRDDSVLVEWKAPVYTGTSPITGYFVDFAKKGSDEWHCSNESHA
VSHRYHKVTGLEVGVSYVFRVRAANAEGAGKPSLASNPVVAKAVKGAQEMTCTVDEESGD
FILSFESCQITENSHFVWKKFYKEITDFSKGIVIKTEGNISKLIFKHPDQGDMGCFSVAV
TNTDGVSASHEIHAEELEKMLAKSYGIRHPVIPLKTQLAYKILERGRMRFWLQAEHISSA
VTYKFLANNNELSPTNPNHASHDVEAGIIEFVLDHFTEDSEGTFTVQIEDGKARGQSSLV
LIGADFKAALADAEHQRSEYVRVKDGPHFSEFLSVHVGDDCSVALICKVDNLKKETALHW
FKDAVEITPEGPVNLASGTCKLPISLFSKASTGIYKATISDNRGKDQSQIEISGHAFDEI
INKLSKLAGSSATELAIHCTATGIQLQCHMKYYTEEMKIHWLHVERKLSHSEKVRIGGTP
AMATMEIIEPTDKDKGLYHIQIIDTDKTYTRTIDLSGHAYDKAFAEFTTLKEEAYAEANR
GKVLGGLPDVVTIMEKKTLSLTCTVCGDPKPQVTWLKNGAEVYTDDQYLVSLESGKFASL
TIKRVSLEDCGRYTMTVQNKYGGESVDIVVSAYKHGDTIPQAKPTLTPKSIIPPKRPIEI
PGPKVVTPAPSPAPSHVSSPAGAKSPTSPKGLKSPTPARSMKSPTPTRRK
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaacagttgccagacacaagcacgtgcacgtaagccacgactgccacagtgca
cagtctaaggttgtagcaaagcagtatacaagctctgaggttgtggaggacgattatcat
cacaaacaagaaacaagaatccagggagtggtgcggaagaagatggttgagaagtatgtt
cgtgaggagtctatgataaggggtcctcaattcctgaccacactccgatcccataccgtt
tgggagcacactcctgtgaaactatactgtacggtcgagggttaccctaccccacttgtg
aaatggtataaagatggtgtcagcattgacatgtcatcaattaaatacaatgtgcaggac
aatgttggaattcataccctggagattgccaagtgtgaaactgatgacactgcgcagtac
actgctgtggctggtaacattcatggacaggtctctactcaagcctctgtcattgtcaag
aggatcagagaagaaggacattcatcttcctatgcatggcttccttacacaattcccatg
ttgccggagatcaaatacaccaagatcaacatcaccttcttggagacttttggctcagtc
tttggaacagagggagacacagtcaccttggccgccacaatgaccgctactcctaaccta
gccaatctgcagcctgaagctcaatggttccgagacgatcatcggctgtcagactccaag
tgggtgaagatagagtctgctagaggcgagaccaagctgaccctgcctcacctgaacaag
gatgatgagggtgtctactcactccgtatggttacaaaggggggagatgcggtccacagt
gcatttgtttcctgtgcagatggtcctcccccagtgcctggagctccaggtgcccctatg
gacatcaagatccatgacgccaacagagattatgtcatcgtgtcctggaagcctcccaac
accaccactgaaggccccatcatcggatactttgtagatagatgtgaaactggaagtgaa
aattgggtgcagtgcaatgactcccccattaagatctgtaaatatcctgtgcctggcctg
ttcgagggccactcctactatttccgtgtgcgggcaataaactcacacggcatcagcaag
ccctccagaatatctgaccccatcgccgccctggaccccactgaatttgaaagactccat
gccatcaagttgggtggaaaacttgacgttgtaatctaccaccacgacgttgaagatggg
aagaaaataccaggaaccccctccaagttgcacgcttcagagactgaccgaacatatgtt
gtcctcagctggaaacctgctccttatcagggccaggccccagtgtggtactatattgag
aagtgcttggccgagagcggtgcatggcagagggtaaacactcaggtacccgtgagatct
cctcgctatgccgtgttcgatttgtctgagggaaaacagtacttgttccgcgtgctggct
gcaaacatgtacggcagcagtgaagcctctgagcccacagagcccattcagactcaagag
ctgcgcggggtcccctccgctcctggtcaggtggttgccacaagggagactgatacatct
cttcttatccaatgggctgaacccaaggagcctaataatcttattggctactacatcgat
gtgtgtgtaaaaggctccaaggactggggttcagctaaccacaaacctcacaagaacaac
aagtttgtggttcaaggtttgaccactggtgagacatatactttccgtgtgcaagccatc
aatgagctgggtcttagtgatgaatcacaggagtcctcccccctctctgtcaaagctgca
ctcacgactccctctgctccatatgacattgctctgctggcctgtgacggagagtctatg
gttctgaactggaagcacccagtccactccggtggctctccagtggttgaatactacatt
gacaaacacaggcacggagaacacacatggagagagatcaacatcccaccaatcaaagag
cggctgttcaaggttgaacatctgagtgcaggtgcagtctatgagttcatggtttatggt
ggaagtcttgctggtcttggtgccccctctgcccccagcaaggccttccattgtgatgcc
tggaccatacccgagccaggtccagcctatgacatgactttctgcgagatccgtgatgac
tctgtgttggtggagtggaaggctcccgtctacaccggcaccagcccgatcacaggctac
tttgttgactttgcaaagaaaggctcagatgaatggcactgttccaacgagagccacgct
gtcagtcaccgctaccacaaggtgactgggctggaagttggagtgtcctatgtgttcaga
gtgcgcgcggcgaacgctgaaggtgccggcaagccttccttggcttctaaccctgtggtt
gccaaagcagtgaaaggtgcccaggagatgacctgcacagtggacgaggagtcaggtgac
ttcatcctgtcatttgaaagttgtcaaattacagagaattcccactttgtgtggaagaaa
ttctacaaggaaatcactgacttctccaaaggcattgtcatcaaaacagagggcaatatc
tctaagcttattttcaaacacccagaccagggggatatgggttgcttctccgttgctgta
actaacactgatggtgtttctgccagccatgaaatccatgccgaagagctggagaaaatg
ctggcaaagagctatggtattcgacacccagtgatccctctaaagactcagctggcctac
aagattctggagcgcggccgcatgcgcttctggctgcaggctgagcacatctcctctgct
gtcacctataagttcttagctaacaacaatgaactctcaccgactaatccaaatcatgcg
agtcatgacgttgaggctggcatcattgagtttgtgctggatcatttcacagaggatagc
gagggcacctttactgttcagatcgaggatggcaaagccagaggacagtcctctctggtg
cttatcggagctgatttcaaggcagctctcgctgacgcagaacaccaaaggagcgagtac
gtcagagtgaaagacggcccccacttcagtgagtttttgtcagtccatgtcggggatgac
tgctctgtggcactcatctgcaaggtggataatctgaagaaggaaactgcactgcactgg
tttaaggatgccgttgagattacccctgaagggccagtcaatctggcatctggaacctgc
aagcttcctatttccctgttctccaaggcttccactggcatttacaaagctaccatcagt
gacaacagaggaaaggatcagtcccaaattgaaatatctggccatgcttttgatgaaatt
atcaacaagctttctaaactcgctggatcctctgcaactgagttggcaattcactgcaca
gcaacaggcattcagctccaatgccacatgaaatactacacagaggagatgaaaatccat
tggctgcacgtggaaaggaaactctctcactctgagaaggtgcgtattggaggtacccca
gccatggccactatggagatcattgaacccacagacaaggataagggtctttaccacatc
cagataatagatacggataagacctatactcgcaccatcgacctctctggacacgcctac
gataaagcctttgcggaattcacaactctcaaagaggaagcatatgctgaagccaaccgt
ggcaaagtgctgggcggtctccctgatgttgttaccatcatggagaagaagacactgagt
ttgacctgcacagtgtgcggtgaccccaaacctcaagtcacctggttaaaaaatggtgca
gaggtgtataccgatgaccagtacttggtgtccctcgaatccgggaagtttgccagtctc
accatcaagcgtgtgtccctggaagactgtggcaggtatactatgacggtgcagaacaaa
tatggaggagagtccgtggatatcgttgtgagcgcctacaagcatggagacacgattcca
caggccaaaccaactctaacacccaagtccatcatcccacctaaacgtcctattgagatc
ccaggtcccaaggttgtcacccctgccccttccccagctccttcccatgtctcttctcca
gccggtgccaagtcccccacctctcctaagggactgaagtctcccaccccagctcgtagc
atgaagtcccctaccccaacaaggagaaagtaa
DBGET
integrated database retrieval system
