Oncorhynchus tshawytscha (Chinook salmon): 112223936
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Entry
112223936 CDS
T05605
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112223936
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112223936
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112223936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_10
ANCHR-like_BBOX
COG6_N
Motif
Other DBs
NCBI-GeneID:
112223936
NCBI-ProteinID:
XP_042161673
UniProt:
A0AAZ3QD43
LinkDB
All DBs
Position
LG25:complement(39507245..39528276)
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AA seq
741 aa
AA seq
DB search
MADTELKPESKPDQKLCCTVCSSALNGDKSSTCGHLVCASCLGKKSKGCPQCLQCSGRPI
PASVEQNGTMIEIVAESPLVIKTEEREKRDIQTQISKTPDKAMIREDLKELENPKTSDKA
MIREDLKELEDPMKSEDAKIQKDLKESEDPKTPDKAMIREDLKELEDPMKSEDAKIQKDL
KESEEEKNKESDPPQPAEEVKEDVGVGVGDTLKEEKAKGEVKVEPLGPDDVVCDSCMEMS
PCRALKSCLTCLVSYCEAHLRPHLENPKFQNHRLVEPLRDIERRTCETHKWPLDLFCCAD
AVCVCQDCVTEDHRGHNTVPVMEARRNIERELLDKQAEMVRTMTAAENAINKLQVNTVSI
ENSVTEVREVIENQFTVLQAAVERAKREVTEILEGEEKQALRQADGIKVHLEQRCTELKK
TQAQVEKLSKNKNDVDFLQEYSEWKKDCSDITLPGVYIGLMDRLNSFSREIVTSTQELCE
LLLSNYIETLKETCKNDMIGIKTTVHEIIAAKQNMDIPDPKTREDFLKYANPVSFDADTA
HKFLRLTEENRKVTNTTPWQHPYHDVPERFESWRQVLATESFYVGRHYFEVDVSGEGTYV
GLTYKSIDRKGPESNSCITGNDFSWCLQWNGRSFSAWHGDVETPLSVDKFTRIGVYVDYS
RGLLAFYGVDDVVGMTLIHKYKAEFLEPLYPAFWLSKKENVVVLVEPGEPLTLKSPSPPK
IPLNTDVAPQSRFTVTLVVEQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacagaactcaaaccagagtcaaaaccagaccagaaactctgctgcactgtt
tgttccagtgctctcaatggtgacaaatcctctacctgtggccacttagtctgtgcctcc
tgcctgggcaagaaaagtaagggctgcccccagtgtttacaatgctctggcaggcctata
ccggcatctgtggaacagaacggaacgatgatagaaatagtggctgagtctccactggtg
atcaaaaccgaagaaagagagaaaagggatatacaaacccaaatttcaaagacaccagac
aaggcaatgatacgggaagacctgaaggaattagagaaccctaagacatcagacaaggca
atgatacgggaagacctgaaggaattagaggaccctatgaaatcagaggatgcaaagata
cagaaagacctgaaggaatcagaggaccctaagacaccagacaaggcaatgatacgggaa
gacctgaaggaattagaggaccctatgaaatcagaggatgcaaagatacagaaagacctg
aaggaatcagaggaagagaaaaataaagagagtgatcctccacagcctgcagaggaagtg
aaagaggatgtgggggttggggtgggagacacattaaaggaagagaaagcaaaaggagag
gtgaaagtagagccgttggggcccgatgatgttgtgtgtgactcgtgtatggagatgagc
ccgtgccgggccctcaagtcctgcctcacctgccttgtgtcctactgcgaggcccacctt
aggcctcacctggagaaccccaagttccagaaccacaggttggtggagccgctgagggac
atcgagagacggacctgtgagacccacaagtggcccctggaccttttctgctgtgccgac
gctgtgtgtgtctgtcaggactgtgtgacagaggaccacaggggacacaacactgtgcct
gtgatggaggcacgcagaaacattgagagggaactactagataagcaagcagagatggtg
aggacaatgacagcagcagagaatgccatcaacaaacttcaagtcaacacggtctctatt
gagaattcagtgacggaggtccgtgaggtgattgagaaccagtttacggtgctccaggct
gcggtggagcgggccaagagagaggtgacggagatcctggagggagaagagaagcaggct
ctgagacaggccgatgggatcaaggtacacctggagcagaggtgcactgagctaaaaaag
acacaggcgcaggtggagaagctctccaagaacaagaatgacgtggacttcttacaggag
tactctgagtggaagaaggactgctccgacatcaccctacctggggtctacatcggcctc
atggaccggctcaactccttcagcagagagattgttacctccacacaggagctgtgtgag
ctgctgctgtccaactacattgagacactcaaagagacctgcaaaaatgacatgataggg
attaaaacaacagtccatgaaataatcgcagccaaacagaacatggacattccagaccca
aagacgcgggaggactttctaaagtatgccaatcctgtgagttttgacgcagacacggcc
cataaattcctgcgcctgactgaggaaaacagaaaggtgaccaacaccacaccctggcaa
cacccgtaccacgacgtccctgaacgttttgagagctggcgacaggtactggccacagag
agcttctatgtcggccgacactacttcgaggtggacgtgagcggcgagggcacgtacgtc
ggactcacctacaagagcatcgaccgcaagggtcctgaaagtaacagctgcatcaccggc
aatgacttctcatggtgcctccaatggaacgggcgtagcttctctgcctggcacggtgat
gtggagacgcctctaagcgtggacaagttcacacgcattggggtctatgtggactatagc
cgtggattactggctttctacggggtggatgacgtcgtcggcatgaccctcatccacaaa
tacaaggctgagtttctggagcccctctacccagccttctggctgtcgaagaaggagaac
gtggtagtgcttgttgaacctggagagccgctgacactgaaaagcccctctccccctaaa
ataccccttaacactgacgtagcaccccaaagccgtttcacagtaactcttgttgttgaa
caatga
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