Oncorhynchus tshawytscha (Chinook salmon): 112224041
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Entry
112224041 CDS
T05605
Name
(RefSeq) RPE-retinal G protein-coupled receptor
KO
K04254
retinal G protein coupled receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112224041
04030 G protein-coupled receptors [BR:
otw04030
]
112224041
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112224041
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Vision
Opsin
112224041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
112224041
NCBI-ProteinID:
XP_024243095
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All DBs
Position
LG25:complement(43477693..43485572)
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AA seq
296 aa
AA seq
DB search
MAAYTLPEGFSDFDMFAFGSALLVGGLVGFFLNAVSILAYISVKQMRTPSNFLVFNLAVA
DIMLNTTGLIAAYASLSYRHWPWGQDGCSYHAVIGMTAVLASISFLATIAWDRYHQYVTN
QKLFWSTAWTFSIIIWGLAIFWAAVPLTGWGVYDFEPMRTCCTLDYTKGDKDYITYMGAL
TVFYLIFPAYVMKSNYDAIYAYFKKIHKHRWNTSVPLRVLLFCWGPYEVMCIYACFGNAK
LVSPKLRMLLPVLAKMNPIFNAWLYSFGNEFYRGGVWQFLTGQKFTEPVVVKLKGR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatacacattaccggagggattctccgattttgacatgtttgcattcggttca
gctcttcttgttgggggtcttgtcggattcttcctgaacgccgtttcaatattggcctat
attagcgtaaagcaaatgcgaactcccagtaatttcctcgtctttaacctcgccgtggct
gacattatgctcaatacaaccggcctgatcgctgcatacgccagcttatcgtacagacac
tggccctggggtcaagacggatgtagctaccacgccgtcatagggatgacagcagttctg
gcctccatcagtttcctggctaccatcgcctgggacagatatcaccaatatgtcaccaat
cagaagctgttttggagcacggcctggactttttctatcattatctgggggttggccatc
ttctgggcggccgtacctctgactggatggggagtgtatgactttgagccaatgaggacg
tgctgcactctagactacaccaaaggagacaaagactacattacctatatgggggccctg
acggtcttctaccttatcttccctgcttatgtcatgaagtccaactacgatgccatttac
gcatacttcaagaagatccacaagcacaggtggaacaccagcgtaccactaagggttctg
ttgttctgctggggaccctacgaagtcatgtgtatctacgcctgctttggcaacgccaaa
ctggtctctccaaagctgagaatgttgcttcctgttttggcgaaaatgaaccctattttc
aatgcttggctctattcctttgggaacgagttctacagaggaggggtgtggcagttcctg
actggccagaagtttacagagcccgtcgttgtgaagttaaaaggaagataa
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