Oncorhynchus tshawytscha (Chinook salmon): 112224042
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Entry
112224042 CDS
T05605
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112224042
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112224042
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GFIT
Motif
Pfam:
LRR_8
Ig_3
ig
I-set
LRR_4
Ig_2
LRR_5
V-set
fn3
LRR_EndoS
LRR_14
Motif
Other DBs
NCBI-GeneID:
112224042
NCBI-ProteinID:
XP_024243096
LinkDB
All DBs
Position
LG25:43543951..43546993
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AA seq
579 aa
AA seq
DB search
MATLYTVLAIAWLFYKVTPASTSCLPGCSCTNDNLGRSLLCMETAMGRIPDNVPNYFSKI
RIENSHLTELPSGSFSKVTALASLWLNFNDITLMNIKSLEGLTNLTELRLQGNKLRSVPW
TAFQDTPNLNILDLKLNRLDVLPESALRQLPGLTYLDLSFNQLTVISRDVFLNWPLLNTQ
ERKGRKEASSGEANVVLALHDNPWLCDCRLKGFVEFIKTISPPLILMNSYLTCTGPSSRA
GKFFHEVGLKTCMKPEASATETNMTVSLGDKVTLQCLVKARPEPSIHWSYNLKIIKGFTV
AETRVDDETIRSQLVIPSMHLEDRGIYTCFANNFIGNFSVSFLINIKSFNASSSGGAAMS
RPPFPLSSADENVYIDIRISKQTVYGITLEWYAATDNPAETWFTIHLGKYHSEKKELTYI
GPGINTYEVNDLLPVTKYEVCVTLKNQTPRAGQCIVFLTGSDISQLEQREKFIHIIVIMC
AMVLAVPVGMYACTTDTRCTFSCLDRCTEQCKRRRRQEKTLRTNGERQGTFDSLQAASDE
GLCRDSEELMMKRRSSQDKNNHKGRVQDPQETNIGAKLY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggccaccttgtatacagtattagctatagcttggctattctataaagtaactcctgcc
tcgacatcttgtttacccggctgctcttgcacaaatgataacttgggaagatccttactt
tgtatggaaacagccatgggacgaatcccagacaacgtcccaaattatttcagtaaaatt
cgaatagagaattcccacctgaccgaattaccgagcggctccttctctaaagtcactgcc
ttggcgtctctatggttgaatttcaacgacatcaccctaatgaacatcaagagtctggag
gggctgacgaatttaacggaactgcggctccagggaaacaagctgcgttcagtcccatgg
acagcattccaggacacgccgaacctgaacattttggacctgaaactcaatcgactagac
gtgctcccggaatccgccctgagacaactaccgggcttgacctatttagatttatccttc
aatcagcttactgtcatatccagggatgtcttcctcaactggcctctcctcaacactcag
gagagaaaaggacgtaaagaggccagcagtggagaggccaacgttgttttagcgctgcac
gacaacccttggctgtgtgactgccgcctcaaaggtttcgtagagtttatcaaaaccatt
agtccgcctctaattctgatgaactcgtacctgacgtgcacgggccccagttccagggcg
gggaagttcttccacgaagtcggtttgaaaacatgcatgaagcccgaggcctcagccaca
gaaaccaacatgacggtgtcactgggggacaaggtaaccctccagtgcttagtcaaagcc
aggcctgaaccctccatccattggtcatacaacctgaagattataaagggatttactgtg
gcagagacccgtgtggacgatgagaccatcagatctcagctggtcatcccatccatgcac
ctggaagaccgaggaatctacacctgcttcgccaacaactttatcggcaacttctccgtc
agtttcctgatcaacatcaagtctttcaacgcctcctcctccggcggtgccgccatgtct
cgtcccccgttccccctgtcctcagccgacgagaacgtctacattgacatccgcatctcc
aagcagacggtctacggcatcactctggagtggtacgctgcgacggacaaccctgcagag
acctggttcaccatccacttggggaaataccactctgagaaaaaggagttgacatacatc
gggccgggcatcaacacctatgaggtcaacgacctcctaccggttactaaatacgaggtg
tgtgtgacgctgaagaaccagacgcctcgcgccggtcagtgcatcgtgttcttaacagga
agtgacatcagccagctggaacaacgggagaagttcatccatattatcgtgatcatgtgc
gccatggtgctggcggtgcctgtggggatgtacgcctgcaccaccgacaccagatgtacg
ttcagctgcctggaccgctgtacggagcagtgtaagaggaggaggaggcaggagaagacc
ctgaggaccaatggggagagacaggggaccttcgacagcctccaggccgccagcgatgaa
ggactctgtcgtgactctgaagagttgatgatgaagaggaggtcctcccaggataaaaac
aaccacaagggcagagtacaagatccacaagagacaaacattggagcaaagctttattag
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