Oncorhynchus tshawytscha (Chinook salmon): 112224062
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Entry
112224062 CDS
T05605
Name
(RefSeq) nebulin-related-anchoring protein isoform X1
KO
K24421
nebulin-related-anchoring protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112224062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112224062
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
LIM domain-containing proteins
LASP family proteins
112224062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nebulin
LIM
DUF6634
Motif
Other DBs
NCBI-GeneID:
112224062
NCBI-ProteinID:
XP_024243116
LinkDB
All DBs
Position
LG25:2342790..2433990
Genome browser
AA seq
1764 aa
AA seq
DB search
MQSCARCGFVVYPAEKINCIDQNWHKACFHCDVCKMVLTAKNFVSHKKRPYCSVHNPRNN
MFTSVYETPINAKKQAIASSEQDYQAKFEEQQTYSYSGTITNQEIVSVTQAQKTISDVKY
TEEYEQSKGKSSLSTMITPGYQISKKPNTLPSSAEYNKGEEKVSKYSSIAKTPEVLLAKS
QGQINYVYTEEYEQQLGKGSFPAHLTPGYQVSKKATEMASGVKYRQMYEQEMKGKATSDA
GAAEFASARENAGNFSQIAYTEEYEQQRGKGSFPAMITPAYQLAKKAQAHASDLKYKKDL
NKMKGSSHFHNLTSEDNLALKSARKINKIVSEVEYKKDLENTKGHSINYCETPQYKNASK
AAKFSSDNKYKEKYTNHMKGHYEGSEMDKNAVHAMNVRKLASNIAYKQEYEQDKTDHVEY
NYPATITPGYQSQRKLDPLKDKNYRQHIDQVKYSSVTDTPDIVQARINAQQLSNVNYRQH
IDQVKYSSVTDTPQIVQARINAQQLSNIKYKEDWEKTKSKTCDIGLDTLTVKAAKASRDL
ASDIKYKESFMKNKDKTSNVSDSKTLHSLQASKMTSEIEYKKNSKENQSQFSLSMDMVNL
SHAKKAQALASDLDYRTKLHHYTILSDDIQVQQAKKAYNLQSENQYRSDLTWMKGVGWEA
DGSLNVTQAKKAGELLSDKKYRQKVDNVKFTQVADTPSIKHAKKSQELQSKLTYKAGNEQ
MMHQYTMDKDEPLFRQAKANADLLSGKVYKRSWEQQREKGFELCMDSLSILTAKAKRDLA
SNVKYKEKYEQTKGKMIGVKMVTDDSQMAHSALATRLQSDRHYRKKYEDTKTKHSASLDM
LTMTHAKKAQDLATETNYRTFLHKYTTLPGDMKVAWAKKAYGLLSDKQYRSDRNWMKGVG
WVAADFLDVKQAKKAGELVSEKKYRQHVSDLKFTSVEDTPEMVQAKLSNKLALDRLYREK
GEHMKHNYTLSGDLPEHVQAKLNAMNISETRYKESWTKIRDGGYKLRLDAIPFQSAKASG
NILSDHKYKEQFEKTKGHMIGLKGLENDMNMSHSVNASKLQSDIKYKQDSVNKRSQYHLS
MDMLEMAHAKKAQTLASEQDYRLTLHQYTTQPDDMKVQAAKRAYQLQSEKVYRSDLNYLR
GVAWISTGALQMEGFKRATDLISEKNYRQQPCSFKHTSVADSPDIVHAKLSNKLTNERLY
KMKGENDRHNYTMTLERPEITQAKINAANFSETKYRESWHTLRAQGYKLTMQDIPFQAAK
TSMDLASDVQYKHHHLLDKGKHIGARSILDDPRMLHCMQMGRLTSEQEYRKDALSTSGQY
HLNPDMINLVTAKNAQALASDQDYRKRLHAYTVLPDDIKVQWAKKAYNLQSEKLYKSDLN
FMKGVAWDGVGAPQMELAKKAGELTSNKKYRQLPDSLKFTQVADSPDIVHAKNSYLQCSE
RLYKSGDSDAMHKYTLHADDPDFIRARINAQQISNKAYKASGDEMRSAGYDLRLDAIPFQ
TAKASTNIASDFRYKEAFVKEKGQQVGLLSVEDDPKMVHSLAASKLQSCLGYKRQAQETR
SQFKMHANQPVFQQAKKSQALASNQTYHQRLHDYTFDPQQLNVQHAKQAYKLQSDVNYKS
DLNWIRGVGWTPPGSHKVEMARRAAELGLTESVSTEEAIAQYQHMMMMQQMEEQQQVSEP
VETSKEFQQSGVNLDAMEILHVKRKKTIQTVKKSNSSSMDSSVKKLMMSSNSAIESMMAS
TSVSAIENTVKMSTMSEASALENA
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctgcgccaggtgtgggtttgtggtgtacccagcggagaagatcaattgtatt
gatcagaactggcacaaagcatgctttcactgtgatgtctgtaaaatggtgctcacagcc
aagaactttgttagccacaagaagcggccatactgctctgtacacaatccaagaaacaat
atgttcaccagtgtctatgagacccccatcaatgccaagaagcaagccattgccagcagt
gagcaggactatcaggctaagtttgaggagcagcagacctactcgtactcaggcaccatc
accaaccaggagattgtcagcgtgacacaggcccaaaagaccatcagtgatgtcaaatac
actgaggaatatgagcagagtaaaggaaaaagcagcttatccaccatgatcacaccagga
taccagatttccaagaaaccaaataccttgcccagcagcgcggagtacaataaaggagag
gagaaagtgtcaaaatattcctccatagccaaaacccctgaagtgcttctggccaaaagc
caaggacagatcaattatgtctacactgaagagtatgaacagcagttgggtaaaggcagt
ttccccgcacatctcactcctggctaccaagtttcaaagaaagccacagagatggccagt
ggtgtgaagtaccgtcagatgtatgagcaggagatgaagggaaaggccacctcagatgct
ggggcagcagaattcgcttctgccagagaaaatgctgggaacttcagccagattgcctac
actgaagagtacgagcagcagagagggaagggcagtttcccagccatgatcactcctgcc
taccagcttgccaagaaagcccaggcccacgccagtgatttgaaatacaagaaggacctg
aataagatgaagggctcatcccacttccacaacctgaccagtgaggacaacctggccctg
aagagcgcccgcaaaatcaacaagatcgtcagcgaggttgagtacaagaaggaccttgag
aacactaaaggccacagcatcaactactgtgagacgccccagtacaagaatgcatccaag
gctgccaagttcagcagtgataacaagtacaaggagaagtataccaaccacatgaaaggg
cactatgaaggctctgagatggacaagaatgctgtacacgctatgaacgtcagaaagctg
gcaagcaatattgcctacaagcaggagtatgagcaggacaaaactgaccatgtggaatac
aactacccagccaccatcacaccaggctaccagagtcagaggaaactggatccactcaag
gacaagaactacagacagcacattgaccaagtcaagtacagctcggtgacagatacccct
gacatcgtccaagccaggatcaacgctcaacaactcagcaatgttaactacagacaacac
attgaccaagtcaagtacagctcggtgacagatacccctcaaatcgtccaggccaggatc
aacgctcaacaactcagcaatatcaaatacaaggaggactgggagaagaccaagtccaaa
acatgtgacatcggcctggacacgctgaccgtcaaggctgccaaagcatctcgggacctg
gccagtgatattaagtacaaagagtccttcatgaaaaataaagataagacaagcaatgtc
agcgactccaagaccctgcactctcttcaggcgtccaagatgaccagtgagattgagtac
aagaagaactccaaggagaaccagtcccagttcagcttgtccatggacatggtcaacctg
agccatgctaaaaaagcccaggcccttgccagcgacctggactacaggacgaagctccac
cactacaccatcctatccgacgacatccaagtgcagcaggccaaaaaggcctataacctg
cagagcgagaatcaataccgttcagatctgacctggatgaagggagttggctgggaggct
gatggatctctgaatgtgacccaagccaagaaggctggagagcttctcagtgacaaaaag
taccgtcagaaagtggacaacgtcaagttcacccaggtggccgatactccctctatcaaa
cacgccaagaagagccaggaactgcagagcaagctaacgtataaggcgggcaacgaacag
atgatgcaccagtacaccatggataaagatgagccactcttcaggcaggccaaagccaat
gcagacctcctcagtgggaaagtgtataagcgtagctgggagcaacagcgagagaagggc
tttgagttgtgcatggactccttgtccatcctcacagctaaggctaagagagacctggcc
agtaacgtgaaatacaaggagaagtacgagcagactaaggggaagatgattggggtgaag
atggtcactgacgactctcagatggcacactcggctctggccacccggttgcagagtgat
cgccactacagaaagaagtacgaggacactaaaaccaagcatagtgcctctttggacatg
ttgaccatgacccacgccaagaaggcccaggatctggcaactgagaccaactacaggacc
ttcctgcacaagtacacaaccctgcccggcgacatgaaggtggcctgggccaagaaggcc
tacggactactgagtgataaacagtacaggtcggatcggaactggatgaagggcgtgggc
tgggtggcagcagatttcctggatgtgaaacaagcaaagaaggctggcgagctcgttagc
gagaaaaagtaccgtcaacatgtcagcgatctgaagttcaccagcgtggaggacactccc
gagatggtccaggccaaactcagcaacaaactggccctagacaggctgtacagggaaaag
ggggaacatatgaagcacaactacacactctccggagatctgcctgaacacgtgcaggcc
aagctcaatgccatgaacatcagtgagacccgctataaggagtcgtggactaaaatcaga
gatggtggctacaagctccgtttggatgccattcccttccagtcagccaaagcgtctggg
aacatacttagtgatcacaagtacaaggagcagtttgaaaagaccaaggggcatatgatt
ggactgaagggactggagaacgacatgaacatgtctcactctgtaaatgccagcaaactg
cagagtgacatcaagtataagcaggactctgtgaataagcgctctcagtaccacctttct
atggacatgttggagatggcccatgctaaaaaggcccagaccctggccagtgagcaggac
taccggcttacactccaccagtacactactcaacccgatgacatgaaggtgcaggccgct
aagagagcctaccaactacagagcgagaaagtgtaccgctctgacctgaactacctgcgt
ggtgtagcctggatcagcaccggggccctccagatggagggcttcaaaagggccacagac
cttattagtgagaaaaactaccgtcagcagccctgctccttcaagcacacatctgtcgca
gactcaccagacattgtccatgccaaactcagcaataagcttaccaacgagcgcctgtac
aagatgaaaggggagaatgacaggcataactacacaatgacattggagagaccagagata
acacaggctaagatcaacgcggctaacttcagcgagaccaagtacagggagtcatggcac
actctaagggctcagggctacaaactgaccatgcaggacatccccttccaggctgccaaa
acctcgatggatttagccagcgatgtccaatacaagcaccaccacctgctggataagggc
aagcacatcggcgcccgcagcattctggatgacccgcgcatgctacactgcatgcagatg
ggccggctgacaagcgagcaggagtaccgcaaagacgcactttccaccagcggccagtac
cacctcaatccagatatgatcaatttagtgacagccaagaacgcccaggctctggccagc
gatcaggactacaggaagaggctccatgcgtatactgtcctacctgacgatattaaagtc
caatgggccaagaaggcctacaacctgcagagcgagaaactgtacaagtcggatctgaac
ttcatgaagggcgtggcctgggatggtgtgggggcgcctcaaatggagttggcaaagaaa
gccggagaactcaccagtaataagaaatatcgtcaactgccagacagtctgaagttcacc
caagtggcggactctccagacattgttcatgctaagaacagctacctccagtgcagtgag
aggctgtataagtctggagactcggacgccatgcacaaatacaccttacatgccgacgac
ccagacttcatcagagcaaggatcaacgcccagcagattagcaataaagcctataaagcg
tctggggatgagatgaggtcggcaggctacgacttgaggctggatgctattcccttccag
acggccaaggcttccacgaatatcgccagtgatttccgctacaaggaagcctttgtgaag
gagaagggtcagcaggtggggctgctcagtgtcgaagatgacccaaagatggtgcactcc
ctggcagccagcaagctccagagctgcctggggtacaagaggcaggctcaagagacgcgc
tcccagttcaagatgcatgccaaccagccggtgttccagcaggccaagaagagccaagct
ctggccagcaaccagacctaccaccagaggctccatgactacacctttgacccccagcag
ctcaacgtccaacacgccaagcaggcctacaagctgcagagtgacgtgaactacaagtca
gatctgaactggatcaggggtgtgggctggaccccccctggctcccataaggtggagatg
gcccggcgggctgcagaactgggcctgacggagagcgtgagcactgaggaggccattgcc
cagtaccaacacatgatgatgatgcagcagatggaggagcagcagcaggtgtcagaacct
gttgagaccagcaaagagttccagcagtcgggagtcaatctagacgcaatggagatcctc
cacgtcaagaggaagaagaccatccaaacggtgaagaagtccaattcctcctccatggat
agcagcgtcaagaagttaatgatgtcttccaactcagccatagagtcaatgatggcttcc
acctctgtctcagccattgagaacacagtcaagatgtccacaatgagtgaggcatcggcc
ctagaaaatgcttag
DBGET
integrated database retrieval system
