KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112224134
Entry
112224134         CDS       T05605                                 
Name
(RefSeq) chondroadherin
  KO
K06248  chondroadherin
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510  Focal adhesion
otw04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112224134
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112224134
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:otw00535]
    112224134
Proteoglycans [BR:otw00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    112224134
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRRNT LRR_14 LRR_9 LRR_LRWD1 LRR_NXF1-5 LRRCT
Other DBs
NCBI-GeneID: 112224134
NCBI-ProteinID: XP_024243228
LinkDB
Position
LG25:8723161..8739535
AA seq 363 aa
MPCVSFLLVGTCLLVLGPAVWGAPSQCPAQCHCHGDLQHVICDNVGLKKIPQVSEATRLL
NLQRNNLGSLPTGSFASSKGLISLHMQHCQLHEIGGQAFKGLKKLIYLYLSNNEITSIKP
GAFEDLTELTYLYLDGNRISDLPKGIFSPMINLFILQLNDNKLRDIKPGTFAGAKDLRWL
HMSGNEMNSLQPGSLDDVENLAILHLDRNRLSTYPGLAMSKLRVVEELSLAKNPLRSIPD
NAFQSFGRYMEKLNLDGMGLEKFSDAAFNGVTAIKSLHLDNNKLKSLPNSLEFTTITNLT
LSNNPWSCTCMLAPLRKWMDSSRQRPDALCSSPSSQRGKQIRDSSAFSSCKVKTKRAKKG
TRH
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgccgtgtgtgagcttcctgttggtggggacttgcctgctggtcctcggcccggctgtt
tggggcgcccccagccagtgcccggctcagtgtcactgccatggggacctgcagcatgtc
atctgtgacaacgtggggctgaagaagatcccgcaggtgtccgaggccacccgtctgctc
aacctgcaaaggaacaacctgggtagcctgcccactggctccttcgccagcagcaagggt
ctcatctcgttgcacatgcagcactgccagctccatgagattggcggccaggccttcaag
ggactcaagaagctaatctacctctacctgtccaacaacgagatcaccagcatcaagcca
ggtgccttcgaggacctcactgagctcacttacctctacctggatggcaaccgcatcagc
gacctgcccaagggaatcttctcacccatgatcaacctgttcatcctgcagctcaacgac
aacaagctgcgtgacatcaagccaggcaccttcgccggagccaaagacctgcgctggttg
cacatgagtggcaatgagatgaactcgctgcagccgggctctctggacgatgtggagaac
ctggccatcctgcacctggacaggaacaggctgtccacctatcctggcctggccatgagc
aagctgagagtggtggaggaactgagcctggccaagaaccccctgaggagcatccccgac
aacgccttccagagcttcggacgctacatggagaagctgaacctggatggcatggggctg
gaaaagttctctgacgctgcattcaatggagtgacggccatcaagtctctgcacctggac
aacaacaagctcaagtccctccccaacagcctggagttcaccactatcaccaacctcacg
ctctccaacaacccctggagctgcacctgcatgcttgcccctctgcgcaagtggatggac
tctagccgccagcgccctgatgcgctctgttcatctccatcctcacagagaggaaagcag
attagagacagttctgccttcagcagctgcaaagtcaagacaaagagagccaagaagggc
acgcgccattaa

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