Oncorhynchus tshawytscha (Chinook salmon): 112224188
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Entry
112224188 CDS
T05605
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112224188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112224188
Membrane trafficking [BR:
otw04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
112224188
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
GTP-bdg_N
Exonuc_VII_L
DUF1664
Motif
Other DBs
NCBI-GeneID:
112224188
NCBI-ProteinID:
XP_024243360
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All DBs
Position
LG25:complement(10616174..10677580)
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AA seq
174 aa
AA seq
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MSSDFEAYEQDFGTLTAEITNKIGRIPKLGGKEKTQLVLNVDKQLEEVRELMEQMDLEVR
EIPIQSRGMYQSRLKSYKGEMEKLEKDFKRSRIAYSDDVRNELLGEDAGSSESQLMKLSE
ERAHLLDNTEKLERSSRRLEAGYQIAVETEQVGQEILANLHTDREKIQRSRDRL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagactttgaagcctacgaacaggactttggaaccctgacagcagaaataaca
aacaaaattggaaggattcccaaattaggtggaaaggagaagacacagctggttctaaat
gtcgacaaacagcttgaagaagtcagagaattgatggagcagatggatctggaggtgcgt
gagatccccatccagagcagaggcatgtaccagagcagactgaagagctacaagggggag
atggagaagctggagaaagactttaaaaggtcacgtattgcctacagtgatgacgtgcgg
aacgagctcctgggggaagacgctggctcctcggagagtcagttgatgaagttaagtgaa
gagagagcacatctgttggacaacacagagaagctggaaaggtcatctcggaggctggaa
gctggctaccagatagcagtggaaaccgaacaagttggacaagagatcctggctaaccta
cacaccgaccgcgagaagatccagagatccagagatcggctg
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