Oncorhynchus tshawytscha (Chinook salmon): 112224247
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Entry
112224247 CDS
T05605
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112224247
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Ferlins
112224247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Pex24p
NagJ_C
Motif
Other DBs
NCBI-GeneID:
112224247
NCBI-ProteinID:
XP_024243456
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All DBs
Position
LG25:complement(13460281..13483585)
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AA seq
2053 aa
AA seq
DB search
MLRVVVESAKGLPKNKLGSTPDPVASIIFKDEKKKTKSIDSEVNPVWNEVLQFDLKGSAL
DSSSYIDVIVKDYETIGKDKFLGSAKISLKDLATGQVKSSPSHDVALVNEKGQAIGATVS
LLIRYDPPANAAPKPNDPQEGATAGDSVEGGGEERDEDFIDVGQSGYAGGVSSNGQPGNP
NQRLVRSTRKWNRPLANKPQDFQIRVRIIEGRQLPGNNIKPVVKVNVCGQTHRTRIRRGN
NPFFDEMFFYNVNMLPLDLFDQSISFRVYDSFSLRADSLMGDFKVAIGFIYDGPDHSVMR
KWLLLNDPDDYSSGARGYLKVSMFIVGTGDEPPVEKRDVSDDQDDIESNLLMPAGVTLRW
VTLSLKVFRAEDIPQMDDAFAQSVKDMFGGDGNKKNLVDPFVEARFAGKKLCTQVIEKNA
NPEWNQMLNLQVKFPSMCEQIKLTIFDWDRLTRNDSIGTTYLNLGKIASSGGEIEDEHAG
YGFSQSRKTGESEVGFLPAFGPCYVNLYGSPREFTGLPDPYEELNYGKGEGVAYRGRILV
ELSTKLEGKPDKTVDAIPSDDILVAQKYQRRRKYCLCAVFHSASMLQEPGEPIQFEVSIG
NYGNKLDTTCKPLSSTTQYSCAVFDGNHYYYLPWADIKPVVVITSFWEDISHRLDAVNII
LYISERLQSNITAMKTAILAKASDNRLAEIWLRLVNQLIDDLDRFKVPDLEGQSNLTALD
IQIKKLRDNALQTIMEGADRMRDELADIKNTLVDIEGWLDKLKQLADEPQNSMPDVIIWM
LRGETRVAYSRIPAHQLLYSTYSEQACGQFCGRTRTILMQYPMDKNKGLKVPVQIRVNVW
LGLSAHEKKFNTFSEGTFSVFAELYENQAYMLGKWGTTGLGLRHKYSDVTGKLKLKQEYF
MPPRGWEWEGEWFIDPEKGLLTEADAGHTEFIDEVFQNETRFPGGEWKPAAEPYADVNGE
KTQNPGEMECPAGWSWEDEWAVDDNRAVDEKGWEYGITIPPDEKPKSWVPAEKMYHVHRR
RRVVRPRKRSAAGTTAEKRDQGDPEGWEFSSLIGWKFHRKVRSTDTIRRRRWRRKMAPAD
RLGASAIFKLEGALGVDTDEKRKDEKVDASKPFGANTPTVSCSFDRSHVYHLRIYIYQAR
NLVAMDKDSFSDPYAHVSFLHMSQTTETMKATLNPTWDQTLIFHNMEIYGDPQNIAHYPP
DVVLEFYDNDQVGKHELLGRSMCVPLVKLNPGMDQTPQLLWSPITHKGRRAGEVLVAAEL
ILTDKGIGMDLPLVPPKRAENLYMVPQGIRPVVQLMAIEILAWGLRNMKTYQLATVSSPS
LVVECGGEVVQSAVIKNMKKSPNFPGSVLFLKVLLPKEEMYTPPIVLKVIDHRPFGRKPV
VGQCTIDTLEEFRCDPYIIQKSSMSSKVALMASSPRDIRIDMEDGRPLLETQLAEKEKET
VDWWSKFYASIGDQEKCRPYLQKGYDTLKVYDNELEEIPEFKQLTDFCRTFKLKRGKNED
GDDDPSVVGEFKGSFKVYPLSDDPGVALPPRQFRELPKSGPQECLVRIYVVRGIDLQPKD
NNGQCDPYMKIALGKKSIEDRDNYLPNTTNPVFGRMFEMTCFLPEDKDLKISVYDYDLLS
RDEKVGETVIDLENRFLSRFGSYCGLPQTYCTSGINQWRDQLKPSQILQNLARLKGVPPP
MTEDNGNTLSFNGEQYTLAQFEANNEIHQHLGPANERLPLHVLRTQGLVPEHVETRTLFS
SFQPQLSQGRLQMWVDVYPKSMGLPGPPFDIAPRKAKKYFLRAVVWNTTDVILDETSITG
EHMSDIYVKGWMPGMEEDKQKTDVHYRSLDGDGNFNWRFIFGFEYLPAEQLCLVSKKEHF
WSLDKTEFRIPPKLIVQIWDNDKFSLDDYLGTVELDLCNLTPPAKTPEKCSLGMMEVILD
AEPHKSDLTNSLFAQQSVRGWWPCVIEQDGKEVLGGKVEMTLEIVAENEVDGKPAGKGRD
EPNMNPKLDFPNRPDTSFFWFTNPCKTMKFILCRKFKCMFIGLILLILVLLFIGILLYSL
PNYISMKIVKPFQ
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggttgtggtagaatctgctaaaggtttgcctaaaaataaacttggaagtaca
ccggatcccgtagcatctattatttttaaagatgagaagaagaaaaccaaatcaattgac
agtgaagtaaacccagtttggaatgaagtccttcagtttgatttgaagggctctgcgctt
gattcctcatcttacattgatgtgattgtgaaagactatgaaactattgggaaagataag
tttctaggctctgcaaaaatctcactgaaagaccttgcaactggtcaagtcaaatcctct
ccatctcatgatgtggctcttgtcaatgaaaaggggcaggctattggggccacggtaagc
cttttgattcgctatgaccctccagccaatgccgctccaaagccaaatgacccacaggaa
ggagccacagctggtgattctgtggaaggtggcggtgaagagagggatgaggactttatt
gatgtaggacagagtggctatgcagggggagtctcctccaatggtcagcctgggaaccct
aaccaaagactggtcaggagtaccaggaaatggaaccgtcccctggccaataaaccccag
gactttcagatccgtgtcaggatcatagaggggcgacagctccctgggaataacatcaaa
cctgttgttaaggtgaatgtttgtggacagactcacagaacaaggataaggaggggaaac
aatcccttctttgatgagatgttcttttacaacgtcaacatgttaccattagacctattc
gatcaatctatcagctttcgggtgtacgactccttctctctgagagctgacagtctcatg
ggggacttcaaggttgctattggctttatttatgatggaccagatcactccgtgatgagg
aagtggctccttctgaatgaccctgatgactacagctcgggggccaggggatacctcaaa
gtcagcatgttcatagttgggactggagacgaaccaccggtagagaagagggacgttagc
gatgaccaggatgacatagagagtaacctgctgatgccagcgggggtcactctgcgatgg
gtcaccctgtctctcaaagtgttccgggccgaggacattccccagatggatgatgccttt
gcccagtcagtgaaggatatgtttggaggggatgggaacaagaagaatctagtagaccct
tttgtagaggcccgcttcgctggcaaaaagctgtgcacccaagtcattgagaagaatgcc
aacccagaatggaaccaaatgctgaatcttcaggtcaagttcccttccatgtgtgaacaa
atcaaactgaccatatttgattgggatcgcttgactcggaatgactcaattggcaccacc
tacttgaacttgggcaagatagcgtcctctggtggtgaaattgaagacgaacatgcggga
tatgggttctctcaatcacggaagactggggagtctgaggtgggttttctgccagccttt
gggccttgctatgtcaacctgtatgggagtcccagagagtttactgggcttcctgaccct
tatgaagagctgaactatggcaagggtgaaggggtggcctatcgaggacgaatcctggtt
gagctctcgactaaactggaaggcaaacctgacaagactgtggatgcgatccctagtgat
gacatcttggtggcccagaaataccagcgtaggaggaagtactgtctgtgtgccgtgttc
cacagtgccagcatgctccaggagcctggcgaaccaatccagtttgaagtcagcatcggc
aactatggcaacaaactggacaccacctgtaaaccactgtcctccactacccagtacagc
tgtgctgtgtttgatggtaaccactactattacctgccctgggctgacataaagccagtg
gttgtcatcacatcattctgggaggacatcagtcaccgtttggatgcagtcaacatcatt
ctgtacatatctgaacgcctgcaatctaacatcactgcaatgaagacggccatcttggct
aaagcttctgacaaccgtctggcagagatatggctgaggctggtgaatcagctgatcgac
gatcttgaccgtttcaaagttccagacctggagggccaatccaacctgactgccctggac
atccagatcaagaagctgcgggacaacgccctgcagaccatcatggagggggccgaccgt
atgagagacgagctcgccgacatcaagaacaccctggtggacatcgagggctggctagac
aaactgaagcagcttgctgatgagccccagaacagcatgcctgacgtgatcatctggatg
ctgaggggggagacgagagtggcttacagccgtatcccagcccaccagctcctctactcc
acctacagcgaacaggcctgtggacagttctgcggcaggaccaggactatcctcatgcag
taccctatggataaaaacaaggggctcaaggttccagtccagatccgagtcaacgtgtgg
cttggcctgtctgcacacgagaagaagttcaacactttctctgaggggacgttcagtgtg
tttgctgaattgtatgagaatcaggcctacatgctgggaaagtggggaactacgggtctg
ggtttacgccacaagtactctgatgtgactggcaaactgaagctgaaacaggagtacttc
atgcccccgcgaggctgggagtgggagggagaatggttcatcgacccagagaagggtctg
ttgacagaggcagatgcgggacacactgaattcatagatgaagtcttccagaatgagact
cgcttccctggcggagagtggaagcctgctgctgagccctacgctgacgtgaatggggag
aaaactcagaacccaggggagatggagtgtcctgcaggctggagctgggaggatgagtgg
gctgtggatgacaacagggctgtggatgagaaaggttgggagtatggaatcactatccct
ccagatgaaaagcccaagtcatgggtgccagcagagaagatgtaccacgtccacagaagg
aggagagtggtcaggcccaggaagagatccgctgctggtacaaccgctgagaagcgagac
caaggagacccagagggctgggagttctcctctctgattggctggaagttccacaggaag
gtgcgttccaccgacacaatccgacgccgacgctggaggaggaagatggcccccgccgac
cgcctaggggcatccgccattttcaaactggagggggcactgggggttgatacagatgag
aagagaaaagatgagaaggttgatgcgtccaagccctttggtgccaatactccaactgtt
tcctgttcatttgacaggtcacacgtctaccacctccgcatctacatttaccaggccagg
aaccttgttgccatggacaaagacagcttctcggatccatatgcacatgtgtctttcctg
cacatgagtcaaaccaccgagaccatgaaggctactctgaaccccacgtgggaccagact
ctgatcttccataacatggagatctatggggacccccagaacatcgcccactatcccccc
gatgtggtgctggagttctatgacaatgaccaagtggggaaacatgagctgctgggtcgg
agcatgtgtgtccccctggtgaaactgaacccaggcatggaccagacccctcaactgctg
tggtcccccatcacacacaagggcaggcgggctggggaggtgcttgtggctgctgagctc
atcctgacggataaggggattgggatggacctccctctggttcctcccaagagggcagag
aatctgtacatggtgcctcaggggatacggcctgtggtgcaactcatggccattgagatt
ctggcctggggcttgcgcaacatgaagacttaccagttggccacagtgtcctcccctagc
ctggtggtggagtgtggaggagaggtggttcagtctgctgtcatcaagaacatgaagaag
agccccaactttcctggatctgtcctcttcctcaaagtgctccttcccaaagaggagatg
tacacccctcccatcgtgctgaaggtgattgaccacaggccatttggcaggaagccagtg
gttggacagtgtaccatagacactctggaggagtttcgctgcgacccttacatcatccag
aagtcatccatgtcatccaaagtggctctgatggcttcttctcctcgggacatcagaatt
gacatggaagacgggaggcctctgcttgaaactcagcttgcagagaaggagaaggagaca
gttgattggtggagtaaattctacgcttccattggagatcaggagaagtgccgtccttac
cttcagaagggatatgacactttgaaggtgtatgataacgaactggaagagattcctgag
ttcaaacaactcactgatttctgcaggaccttcaaactgaaaagaggcaagaatgaagat
ggggatgacgatccatctgtcgttggagaattcaagggctcttttaaggtgtaccctcta
tcagacgacccgggtgttgctcttcctcctcgccagttccgtgagctgcctaaaagcggg
cctcaggagtgcctggtcaggatttatgtggtcagaggcatcgacctgcaacccaaggat
aacaacggccagtgtgatccttatatgaagattgccctggggaaaaagtcaattgaggac
cgagataactacttaccaaataccaccaaccctgtgtttggaagaatgtttgagatgaca
tgtttcttgcctgaagacaaagacctgaagatctctgtgtatgactatgatctgctgagt
cgcgatgagaaagtgggcgagacggtgattgacctggagaaccgtttcttgtcgcgcttc
ggctcctactgtggcctacctcagacatactgcacctctggaatcaaccaatggcgtgac
cagctgaagccctctcagatccttcagaacctggcccgcctcaaaggtgtccctccaccc
atgacagaagacaatggcaacacactgtcattcaatggggaacagtacaccctggctcaa
tttgaggctaacaacgagatccaccagcacttgggccctgccaacgaacgtctccctctg
catgtgcttagaactcaaggattggtgccggagcatgtggagaccaggacactgttcagc
agcttccagccccaactctctcagggccgtcttcaaatgtgggtggatgtttaccccaaa
agcatgggccttcccggaccaccctttgacattgcaccacgcaaggccaaaaagtatttc
cttcgagctgttgtttggaacaccactgatgtcattctagatgaaaccagcatcactggg
gagcacatgagcgatatctacgtcaaaggttggatgccaggtatggaggaggacaagcag
aagactgacgtccactacaggtctctggacggagacggcaacttcaactggaggttcatc
tttggctttgaatacctgcccgctgaacagctatgtctggtctccaagaaggaacacttc
tggagtctagacaaaacagagttcaggataccccccaagttgattgttcaaatttgggat
aatgacaagttctcattagatgattacctgggcacagtagagctggatctgtgtaaccta
acccctcctgccaagactccagaaaagtgcagtctgggtatgatggaggtgattttggat
gcagagccacacaaatcagacctgaccaactcgctgttcgctcagcagtctgtcagaggc
tggtggccctgtgtcattgaacaggatgggaaggaagtccttggtgggaaggtcgagatg
actcttgaaattgtggctgagaatgaggtggatgggaagcctgctgggaagggcagggat
gaacccaacatgaacccaaagcttgacttccctaaccgtccagacacgtccttcttctgg
ttcacgaacccctgcaagaccatgaagtttattttgtgtcgcaaattcaagtgtatgttc
attggactgatcctgctgatcctagtgctgctcttcatcggaatcctgttatactcttta
ccgaactatatttcaatgaaaattgtgaagccgtttcaatga
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integrated database retrieval system
