Oncorhynchus tshawytscha (Chinook salmon): 112224290
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Entry
112224290 CDS
T05605
Name
(RefSeq) F-box only protein 11 isoform X3
KO
K10297
F-box protein 11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112224290
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112224290
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
zf-UBR
Motif
Other DBs
NCBI-GeneID:
112224290
NCBI-ProteinID:
XP_024243541
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Position
LG25:15093501..15113289
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AA seq
727 aa
AA seq
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MEVFEYTRPMMHPEPGKFYQVSPEEHDHPNPWKDSFQQLYKGAHVKPGFAEHFYSNPGRY
KGRENMLYYDTIEDALGGVQEAHFEGLIFVHSGIYTDEWIYIESPITMIGAAPGKVSDKV
VIENTRDSTFVFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPNIDHCIIR
STCTVGSAVCVSGQGACPSIKHCNISDCENVGLYITDHAQGIYEDNEISNNALAGIWVKN
HGNPIIRRNHIHHGRDVGVFTFDHGMGYFESCNIHRNRIAGFEVKAYANPTVVRCEIHHG
QTGGIYVHEKGRGQFIENKIYANNFAGVWITSNSDPTIRGNAIFNGNQGGVYIFGDGRGL
IEGNDIHGNALAGIQIRTNSCPIVRHNKIHDGQHGGIYVHEKGQGVIEENEVYSNTLAGV
WVTTGSTPVLRRNRIHSGKQVGVYFYDNGHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNK
IWGGQNGGILVYNSGLGFIEDNEIFDNAMAGVWIKTDSNPTLRRNKIHDGRDGGICIFNG
GRGLLEENDIFRNAQAGVLISTNSHPVLRKNRIFDGFAAGIEITNHATATLEGNQIFNNR
FGGLFLASGVNVTMKDNKILNNQDAIEKAVSRGQCLYKISSYTSYPMHDFYRCHTCNTTD
RNAICVNCIKKCHQGHDVEFIRHDRFFCDCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIE
SNTLQHN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtttgagtacacacgtcccatgatgcaccctgagccaggaaagttctaccag
gtcagtcctgaggaacacgaccaccccaatccctggaaggacagcttccaacaactgtat
aaaggcgcccatgtgaagccaggctttgctgaacatttttacagcaaccctgggaggtac
aaaggcagggagaatatgctgtactatgacacaatagaggatgcattaggaggggtgcag
gaggctcattttgaagggctgatcttcgtgcactctgggatctacactgatgagtggatc
tacatcgagtcccccatcaccatgatcggagcagctccgggtaaggtgtctgataaggtg
gtgattgagaacaccagagactcaacatttgtcttcatggaaggatcagaggacgcctac
gtgggatacatgactatcaggtttaacccagatgataagtcggctcagcaccacaatgcc
caccactgtctggagatcactgtcaactgttctcccaacatagaccactgtatcatcaga
tctacctgcacagttggctcggctgtctgtgtgagcggccagggggcgtgtcctagcatc
aaacactgcaacatcagcgactgtgagaacgttggactttacatcaccgaccatgcgcag
ggtatctatgaggataatgagatcagtaataatgcattggcgggaatctgggtaaaaaac
cacggcaaccccatcatcagacgaaaccacatccaccacggccgagatgtaggagtcttc
accttcgaccatggaatgggttattttgagagttgtaacatccaccggaatcgcatagca
ggctttgaagtgaaggcgtatgctaaccctacagtggttcgctgtgagatccaccatggc
caaacagggggaatctatgtgcatgagaaaggacggggacagttcatagaaaacaagatc
tacgccaacaacttcgctggagtctggatcacctccaacagtgaccctacgatacggggc
aatgcaatctttaacggtaaccaagggggcgtgtacatatttggcgatgggcgtggcctg
atcgaggggaatgatatccatggcaacgctctggcgggaatccagattagaaccaatagc
tgcccaattgtacgccacaacaagatccacgacggacagcatggtggcatctacgtgcat
gagaagggccagggtgtgatcgaggagaacgaggtgtacagcaacacgttggcaggcgtc
tgggtgaccaccggcagcacacctgtcctccgcaggaaccgcatccacagcggcaaacag
gtaggggtgtatttctatgacaacggtcatggggtgttggaagacaacgacatctacaat
catatgtactctggcgttcagatacgaactggcagcaaccccaagatccgacgcaacaag
atctggggagggcagaacggaggcattctggtctacaactctggtctgggtttcatcgag
gacaatgagatcttcgacaacgccatggcgggcgtgtggattaagacggacagcaacccc
acgctgcgacgcaacaagatccacgacgggagagacgggggcatctgtatctttaacgga
gggagaggtcttctggaggagaacgatattttcaggaatgcccaggcaggagttctgatc
agcaccaacagccaccctgtactccgcaagaaccgtatctttgacggctttgctgcaggt
atcgagataaccaaccatgccacggcgacactggagggaaaccagatcttcaacaaccgt
ttcggtggcctgttcctcgcctcgggggtcaacgtcaccatgaaagataataagatattg
aataatcaggatgccatagagaaagctgtgagcagaggacagtgtctctacaagatctcc
agctacacctcctaccccatgcacgacttctacaggtgtcacacctgcaatacgacagac
aggaacgccatctgtgtgaactgcatcaagaagtgtcaccaaggacacgacgtggagttt
atacggcacgataggtttttctgtgactgtggagcgggaactctttccaacccctgtacg
ctggctggagaaccaacgcatgacacagacacactctacgactccgctccgcccatagag
tccaacacactgcagcacaactga
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