Oncorhynchus tshawytscha (Chinook salmon): 112224303
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Entry
112224303 CDS
T05605
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112224303 (ldb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112224303 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
112224303 (ldb3b)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
Motif
Other DBs
NCBI-GeneID:
112224303
NCBI-ProteinID:
XP_024243559
UniProt:
A0A8C8LZU7
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All DBs
Position
LG25:15530703..15546609
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AA seq
313 aa
AA seq
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MATYTVSLNGSAPWGFRLHGGKDFNMPLTISRITPGSKAAGGSLVQGDIITSIDGLSTEG
MTHLEAQNKIKMASNKLALTMQKSKRPTPVPMATPRMDSPMSVIPHQKEGEHVKKEEEEE
VEVKKFGRLLSKKPVEPTPALRTPSPLLPPSPAAAVSLSSQKGQYNSPISLYSAHTLREM
ALLQGKVAGDGAGAAKLGGEGADSGVPFLGGSLPMKDPVVDSASPVYQAVIQTHDRDEEI
AEWARRAANLQSKSFKMLAHLTGTEYMQDPDEEALQRSRDKFESEVKGPRFRKLKNWHNG
LSAQILNVPETPF
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggctacatacacagtatctctcaatggctccgcgccatggggtttcagactacatgga
ggaaaagacttcaatatgccacttaccatctccaggataactccaggcagtaaggctgca
gggggcagtctagtccagggtgacatcatcacatcgatagacggccttagtacagaaggc
atgacacacctggaggcacagaacaagattaagatggcctccaataaactggccctcacc
atgcaaaagtcgaaacgtcctacccctgttcccatggcaacacccagaatggactccccc
atgtcagttattcctcaccagaaggagggtgagcatgttaaaaaagaagaagaagaagag
gtggaggtgaagaagtttgggagactattgtctaaaaagcctgtagagccgacccctgcc
ctccgtacaccctctccgctcctccccccctcccctgccgctgcagtgtctctctcgagc
cagaagggacagtataactctcccatcagcctgtactctgcacacactctcagagagatg
gccctgctgcaaggcaaggttgcaggagatggggcaggggccgccaagctgggaggagag
ggggcagacagcggagtgccgtttctaggtggttccctgcctatgaaggacccggtggtt
gacagtgcgtctccagtctaccaggctgtgatccagacacatgatagagacgaggagatt
gccgagtgggccagacgggctgccaacttgcagtccaagagcttcaagatgctggcccac
ctcaccggcaccgaatacatgcaagacccagatgaggaggccctgcagaggtcgagggat
aagtttgaatcggaggtgaaaggacctcgcttccgcaagctgaagaactggcacaacggt
ctctcagctcagatcctcaatgtccctgagactcccttctga
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