Oncorhynchus tshawytscha (Chinook salmon): 112224328
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Entry
112224328 CDS
T05605
Name
(RefSeq) LLGL scribble cell polarity complex component 2-like isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112224328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112224328
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112224328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40
PLN_propep
Motif
Other DBs
NCBI-GeneID:
112224328
NCBI-ProteinID:
XP_024243591
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All DBs
Position
LG25:complement(17286597..17311608)
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AA seq
1011 aa
AA seq
DB search
MKRFRRHGQESQRERIKQELYGFNKTVEHGFPHQPSALGFSPSLQLLAIGTRSGAIKLYG
GPGVEFMGLHDENAAVTQVHFLPHQVELVTLLDDNSLHMWTLRAHHGVSELLEIGRFTLT
GPPGAPPSVTRVTAVLAHSSGDLLLLGTEGGHVFIVKVPGFRELEERNISLEKVTNGVPE
DYGGRRSLEHVESLQENPVNPRQVLIGYGRGLMVIWDLDSQSAVTHIPATQQLESVWWTE
DGGHVLSSHSDGSYCRWKVAGDDPQSEQEKSEVPYGHFPCKAISKIIQLPTEQGPPFLFL
SGGMPRASYGDRHCISVIHSKTHVALDFTSRIIDFFVIRDGPYHTGEPSALVVLVEEELV
VIDLQTEGWPVIQTPYLVPLHCSAITCSHHVSAIPLKLWERVLSAGALQNTHYSKKPWPM
TGGQNLAPDPPQRDLLLTGHEDGTVRFWDASGVCLYPMYKLSTAGVFLTDSDPNDNLNQG
TEGEWPPFRKVGCFDPYSDDPRLGIQKIHLCKYSGYLTVAGTAGQILVLELNDEAAEQTV
EATVADLLQGQEGFRWKGHTRLEVREEPVTFPPGFQPFALVQCQPPAVVTALTLHSEWKL
VTFGTSHGFGLYDYQQKNNVLVRCTLNPSDQLAMEGPLSRVKSIKKSLRQSFRRIRRSRV
SLRKHHVNNAAKLQQANARLEAELAEMELAPVQRKIEPRSPDDSFTGLVRTLYFADTFIS
DSSHNTPSLWAGTNGGSVFAYQLRLPPVERRGEDPVTAHPAKEIQLMHRAPVVGILVLDG
HGSPLPEPLEVAHDLARSPDMQGSHSLLVISEEQFKVFTLPKVSAKMKLKLTAIDGSRVR
RVGVAWFGSTRTDDYGESGLTVLTNQGDLHVVSLPGVKLQVQYPCIRREDVSGIASCVFT
KHGQGFYLISPSEFERFSLSARCVVEPRSLVEVSSETPSTTLPRALPDGASVERRNSTRD
GAESSARRVMEHALLNDETVLQEIQKSLEVDQTTFLENGTSALAGGNVLSN
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtttaggagacatggccaggagtcccaaagagagcggatcaaacaggagctc
tatgggttcaacaagacagtggagcatggttttcctcaccagcccagtgccctgggcttc
agccccagtctacagctcctggccatcggcacacgctccggagccatcaaactttacggt
ggcccaggtgtagagttcatgggtctacacgatgagaacgctgccgtcacacaggtccac
ttcctgccacaccaggtggagctggtgactctgttggatgacaacagtctccacatgtgg
accctcagagctcaccatggtgtctctgagctgctggagataggacgcttcacactcact
ggacccccgggtgctccccccagtgtaactcgtgtaacagcggtgctagcccactcttct
ggggacctgctgttgctaggaacagagggaggacacgtgttcatagtgaaggtaccaggc
ttcagagaactagaggagaggaacatcagcctggagaaagtcaccaacggtgtaccagag
gattacggaggtcgtaggagcctggagcatgtcgagtccttacaggagaatcccgtcaac
ccacgtcaggttctgattggatacggacgaggcctcatggtcatctgggacctggacagc
caatcagccgtcacacacatccccgctacacagcaactggagagcgtgtggtggacggag
gacggtggccatgttctcagttcccatagcgacggcagctactgccgctggaaggtggct
ggggatgacccacagagcgagcaggagaagtccgaagtaccgtacggtcacttcccctgt
aaggccatctctaaaatcatccagctgccgacagaacaggggcctccgttcctgttcctc
agtggcggcatgccccgggccagctacggcgacagacactgtatcagtgtgatccacagt
aaaacacacgtggctctggacttcacctccagaatcattgacttcttcgtcatcagagac
ggaccataccatacaggcgaacccagtgcattagtggtcttagtagaagaggagttggta
gtgattgatctccagactgaagggtggccggtcatccagactccgtacctggtgcctctc
cactgctcggccatcacctgctcccaccatgtctctgctatacccctgaagctgtgggag
agggtcctgtctgccggagcattgcagaacacacactactctaagaagccgtggcctatg
acaggaggacagaacctggccccagacccccctcagagagacttactgctcacagggcac
gaggacggtacggtgcgtttctgggacgcgtcgggggtgtgtctgtaccccatgtacaag
ctgagcacggcaggggtgttcctcactgactcagaccccaatgacaacctgaaccagggc
acagagggagagtggccacctttcagaaaggtgggttgttttgacccgtacagtgacgac
cctcgtctcggcattcagaagatccacctgtgtaaatacagcggctacctgactgtagct
ggcactgctggacagatcctggtgttagagctgaatgatgaggcagcagaacagactgtg
gaggccaccgtagcagacctgctacagggacaggagggtttccgctggaagggccacacg
cgtctggaggtgagggaggagccggtgacgttccccccagggttccagccctttgccctg
gtccagtgccagcctccggccgtggtcactgccctcaccctgcactctgagtggaaacta
gtaacattcgggaccagccacggcttcggactctacgactaccagcagaaaaacaacgtt
ctcgtcaggtgtactctgaaccccagtgaccagctggctatggaaggtcctctgtccaga
gtgaagagcattaagaagtctctccgccagtccttcagaaggatcaggcgcagccgagtg
tccctacgcaaacaccatgtcaacaacgcagctaagttgcagcaggccaatgctcgtcta
gaggcggagctagctgagatggagttggcgcccgtccagagaaagatagagcctcgatcc
cctgatgactccttcaccggcctcgtgcgcacgctatacttcgctgataccttcatttca
gacagctcccacaacacaccctctctgtgggcagggaccaatgggggatcagtattcgcc
taccagctccgcctaccgcctgtggaacgcagaggagaggaccctgtcacagcacaccct
gctaaggagatccagttgatgcaccgtgctccagtagtgggcatcttggtgttggacggc
catggttcccctctgcctgagcccctggaggtggcacacgacctggcccgctcacctgac
atgcagggttcacacagcctactggtcatatcagaggaacagttcaaggtgttcaccctg
cctaaggtgagcgccaaaatgaagttgaagctgactgccattgacggctcacgcgtgcgc
cgggtgggcgtggcctggttcggcagcacccgcacggacgactacggcgagagcggcctc
accgtcctgaccaatcagggagacctccacgtggtgtcgttgccgggggtgaaattgcag
gtccagtacccctgtatacgtagggaggacgtcagcggcattgcatcctgcgtcttcacc
aagcatggacagggtttctacctgatctctccgtcagagtttgagcgtttctctctgtct
gctcgctgtgtggtggagccccggtctcttgtggaggtgtcctccgagacacccagcacc
actctgccacgggcgctgccggacggggcctctgtggaacgcagaaattccacgagggat
ggcgcggagagctctgctagacgtgtgatggagcatgctttgctgaatgacgagactgtg
cttcaggagatccagaagtctctagaggtagatcagacgacgttcctggagaatgggacg
agtgctctcgctggagggaatgtgctgagcaattga
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