KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112224390
Entry
112224390         CDS       T05605                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5-like isoform X1
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03020  RNA polymerase
otw04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112224390
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    112224390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otw03021]
    112224390
Transcription machinery [BR:otw03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     112224390
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 112224390
NCBI-ProteinID: XP_024243685
LinkDB
Position
LG25:complement(20271206..20284622)
AA seq 702 aa
MASEEDDDPIIQEIDVYLAKSLADKLYLFQYPVRPSSMTYDDVTHLSAKIKPKQQKVELE
MAINTLSPNYCRSKGEQIALNVDGTTSEDSNTYSVKMMDKQTFTSIQSTTNTSRYAAAVF
RKGELHITPLQGILQMRPSFSYLDKADGKHREREAANEGGDSSQDEVEEDVKAVTVRFSR
PESDQARQRRILSYDFLQKKQAEEPWVYLHYHGLNDGRSDHERQYLYCQAMGGSENTELV
KTPKEYLAMLMPPITEEKIVRPVGPSNVLSMAQLRTLPLGDQVKTLLKNVKVIPFANLMG
LLTPGTDSTAVLRCIQQVALLVQGNWVVKSDVLYPKNSCSPHSGVPAEVLCRGRDFVMWR
FTQERSVMRKEVTAIIKLLPEDVKDFLEHMAVPRINRGWEFLLPSDSDFIKKHPDVAQRQ
HMLWIGIQSKLEKVFNFSKEDLVSKKDPQTEAMHVSGEQRLKAAHERARQNQPSLQKDLS
ARRQGKGGAGPSGGAAVRVKEEPVSDGEDEPMDTSSSSSALPNGLVNGYPSAATSAALNP
HNGHGGTPMPSPSPELRDFVWNMFRKQHVLTLSEVKRLFNLHLASLPPGDSLFHSISDRL
LQDTILMSHCKQILVPFPAQSTAAADEQKVFAVWETGETFDKHRQVLYEIFMKNYRVRRN
VIQTRLTQEMGDQVTKDDVDRLLKECCVSFGGMWYLKGTLQS
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggccagtgaggaggacgatgaccccatcatacaagagattgatgtatacctagctaaa
agccttgcggacaagctatatctgttccagtatccagtacgcccttcctctatgacctat
gatgatgtcactcatctatctgccaagatcaagcccaagcagcagaaggtggagttggag
atggccattaacactctgagtcctaactactgtcgaagtaaaggagagcagatcgccctc
aacgtggacggaaccacctcagaggactccaacacctactctgtgaagatgatggacaaa
cagacgttcacatccatccagtccacaaccaacacctccagatacgctgctgctgtcttc
aggaaaggggagctccacatcacgccgctgcagggtatccttcagatgcgacccagcttc
tcctatctggataaggctgatggcaaacacagagagcgggaggctgctaacgaaggggga
gactcttctcaggatgaggtggaggaagacgtcaaggctgtcactgtgaggttttcccgt
cctgagtcggaccaggctcgtcagcggcgtatcctgtcgtacgacttccttcagaagaaa
caggcagaggagccctgggtctacctgcactaccacggcctcaacgatggccgttcggac
cacgagaggcaatacctgtactgccaggccatgggaggctctgagaacacagaactggta
aaaacaccaaaggagtacctggcaatgctcatgccccctatcacagaggagaagattgtg
aggcccgtaggtcccagtaacgtgctgtccatggcccagctccggaccctgccgctaggt
gaccaggtcaaaaccctgttgaagaacgtcaaagtgataccgtttgccaacctgatgggt
ttgttgacccctgggacagactccactgcggtgctgcgctgcatccagcaggtggcacta
ctggtgcagggtaactgggtggtcaagagtgacgtgctgtatcctaagaacagctgtagt
ccccacagtggtgtgcctgctgaggtgctgtgtcgaggaagagactttgtgatgtggaga
ttcactcaggagcgctcagtgatgaggaaggaggtcacagccatcatcaagctcctgccg
gaggatgtgaaggacttcttggaacacatggcggtgcctcgtataaaccgtggctgggag
ttcctgttgccaagcgacagtgacttcatcaaaaagcaccctgacgtggcccagcggcag
cacatgctgtggattgggatacagagcaaattggagaaggtcttcaacttctctaaggag
gacctggtatccaaaaaggacccacaaacagaagctatgcacgtgagtggcgagcagcgt
ctgaaggcagcccatgagcgtgcacgacagaaccagccctctcttcagaaggacctgagc
gctcgtcgacagggaaagggtggagccggaccgagcggtggagccgcggtcagagtcaaa
gaggaacctgtcagcgacggtgaagacgaacccatggacacatcctcttcctcctccgct
ctccctaacgggttggtaaacggttacccatccgccgccacttccgctgccttgaatcct
cataacgggcacggcgggactcccatgccctcaccgtcacctgagctgagggactttgtg
tggaacatgttcaggaagcagcatgtgctgacgctgagcgaagtcaagaggctgttcaac
ctccacctggcctccctgcctcccggagacagcctgttccactccatctcagaccgcctg
ctacaggatactatactgatgagccactgcaaacagatactggtgccttttccagcccag
agcacagcagctgctgatgagcagaaggtgtttgctgtgtgggagacaggagagaccttc
gacaagcatcgtcaggtcctgtatgagatcttcatgaagaactaccgggtgaggaggaac
gtgatccagaccaggctgacgcaggagatgggagaccaggttaccaaggatgatgtggac
cgcctgcttaaggagtgctgtgtgagctttggagggatgtggtacctcaagggtacccta
cagtcctga

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