Oncorhynchus tshawytscha (Chinook salmon): 112224414
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Entry
112224414 CDS
T05605
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112224414 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112224414 (gspt1)
03012 Translation factors [BR:
otw03012
]
112224414 (gspt1)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112224414 (gspt1)
Translation factors [BR:
otw03012
]
Eukaryotic type
Release factors
112224414 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
112224414
NCBI-ProteinID:
XP_024243719
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All DBs
Position
LG25:21578777..21590426
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AA seq
586 aa
AA seq
DB search
MDPRDTAPDSWEQEEDVKARAAAGLQSALAALSVNAKPFIPNVDAAVFVPTFLQSSPTEI
FNSDGHGAEPVASMEVLETVAPVENGGGTEADMAVEVETWEQKEEPGEGEPGGGGALGGE
GGSSEEAQGREEVEMMEEEEEEELPVLKVIPLPPNAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIILVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKDPI
EECTWYTGLPFIPHLDSLPSFNRITDGPVRLPIVDKYKDMGTVILGKLESGSIAKAQQLV
MMPNRHTVEVLSLLSDEVETDEAVPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRCAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgagacacagcaccggattcgtgggagcaggaggaagatgttaaggcccga
gctgccgcggggctccagtccgctctcgccgctctcagcgtcaatgccaagccatttatc
ccgaatgtcgacgcggcggtgtttgtgccgactttccttcaaagtagccctacggaaatc
ttcaattccgatggtcacggtgctgagccagttgccagcatggaggttttagaaacagtt
gctccggtggagaacggaggagggacagaagcagacatggcggtggaggtggagacgtgg
gagcagaaagaggagcccggggaaggagaaccagggggaggaggagcactgggaggagag
ggaggttccagtgaagaggcacagggaagggaggaagtagagatgatggaggaggaagaa
gaggaggagttgcccgtgctaaaagtaatcccgctcccaccaaatgccccgaagaaggag
catgtcaatgtggtgttcatcggtcatgtggatgctggtaaatcaacaattgggggacag
atcatgtatttgacaggtatggtggagaaaagaaccctggagaaatatgaaagagaagca
aaagaaaaaaacagagaaacatggtacctgtcctgggccctggacactaaccaggaggag
agagacaaggggaagacggtggaggtggggagagcctactttgagacagagaaaaagcac
tttactatcctggatgcccccggccacaaaagctttgtccccaacatgattggtggtgca
tcacaggctgacttggcagtgctggtgatctcggccagaaaaggagagtttgagacaggc
tttgagaagggaggccagacgcgagagcacgccatgcttgccaagacggctggagtcaag
cacctcatcatcctcgtcaacaagatggatgaccccaccgtcaactggagcttggaaagg
tatgaggaatgtaaagagaaattagtgccatttctgaagaaggtgggcttcaatccaaag
aaggacatctacttcatgccttgctctgggctaacgggagccaacttgaaggaccccata
gaggagtgcacgtggtacacggggttgccattcatcccacacctagacagcctgccaagc
ttcaacagaatcacagacggccccgtcagattacccatcgtagacaaatacaaggatatg
ggcacggtgatcctggggaagctggagtctggctccattgccaaagcccagcagctggtc
atgatgcctaacaggcacacagtggaggtgctgagcctgctgtctgatgaggtggagaca
gatgaagctgttcctggggagaacctgaagctaaggctgaagggcatcgaggaagaggag
attctgcctggcttcatcctctgtaacgctgagaacctctgccactccggacgcaccttt
gatgcccagatcgtcatcattgagcataaatccataatctgcccaggttacaacgcagtc
ctacacatccacacctgtattgaagaagtacaaatcacagccttaatttgtctagtggac
aagaagacaggtgagaagagcaagacacgacctcgctttgtcaaacaggaccaggtgtgc
atcgcccggcttcggtgtgccggaaccatctgcctggagaccttcaaagacttcccacag
atggggaggttcacccttcgagatgaaggcaaaaccattgctattggcaaagtgctgaag
ctggtaccagagaaggactaa
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