Oncorhynchus tshawytscha (Chinook salmon): 112224432
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Entry
112224432 CDS
T05605
Symbol
arhgap17a
Name
(RefSeq) rho GTPase-activating protein 17a isoform X3
KO
K20638
Rho GTPase-activating protein 17
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112224432 (arhgap17a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112224432 (arhgap17a)
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112224432 (arhgap17a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
BAR
RhoGAP
BAR_2
BAR_3
Motif
Other DBs
NCBI-GeneID:
112224432
NCBI-ProteinID:
XP_024243743
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Position
LG25:22298104..22342361
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AA seq
881 aa
AA seq
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MKKQFNRMKQLANQTVGRAEKTEVLSDDLLQIERRMEMVRVVSHNTHKRMVTCLQGHIGT
DAEKRHSVPRLYTGNGQKKLPLTALSQAMVDGGSQLGEESLIGKMMEVCGEAENRLASEL
LQHEVQIEKDVLDPLNQLAEVDIPNILKQRKQLARLVLDYDSARARWLQATKSIISGTNT
QALTAKADLLKEEVDEAMNKMELCKDQLAADMYSFFSKEGDYARYYVMLLEAQADYHRKS
LTVLESVLPTIQAQQDSWTEKPAFGTGLEEHLKRSSREIALPLEACVMMLLETGMKEEGL
FRIAAGASKLKKLKAALDCSTSQLEEFYSDPHAVAGALKSYLRELPEPLMSFQLYDEWIQ
ASNVSEPDKRLQALWVVCDQLPKNNKANLRYLVKFLSKLAQDSEVNKMTPSNIAIVLGPN
MLWAKTEGTLAEMAAATSVHVVTIIEPIIQHADWFFPEDVEFNVSGMFAMPTPPSNHSME
YDCSTIERKRPGSMVGPENDNPRKDSFANKLSDHNTVPRRGSNTLGRKQHASPAFQPPLP
PVEAPGPGQFTGCVAELQAPPGGMALEGCQPSLALSMAALVAAQQLLATTAEELSNPKRE
PSSTPTLHQRNGSGGGHPGTASSAGGGGAGGQLGVGGPGAGSMGPSPHMMRRGTKKPAPA
PPKPLNPPSGQSSNPTNHHPFSGQGQSLSPSPRPLSSSSHSPTSPISQPLPPPAANPATS
PHPGPQPPAPTAPTPSQVSPPLHPRALSQPAGDYPGRTSLLQTPPPRLTPLHPPPPSWTY
PVPILAPLSLPVRLPPRPRPVPKPRNRPNIPPPPQPPTQGNDTNGICSTAYKIMDPALSL
KGLTRAFIPEFAVDQQPVTAPSMTSVPQPKDSDLDTESTVL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacagtttaatcggatgaaacaactcgccaaccaaacagttggcagagcagag
aaaacagaagtcctcagcgatgaccttctacagattgagcggcgcatggagatggtgcgc
gtggtgtcccacaatacacacaagaggatggtcacatgtctgcagggccacattggcact
gacgcagagaagagacattccgtaccacgcctttacacaggaaatggtcagaaaaagctt
cctctgacggcgctgtctcaagccatggtggacggtggcagtcagctgggagaggagtct
ctgattgggaagatgatggaggtgtgtggggaggcagagaacaggctggcgtcagagctg
ctgcagcatgaggtccagatagagaaggatgtcctagacccactcaaccagctagcagag
gtggacattcccaacatcctgaaacagaggaagcagctagccaggctagtgctggactac
gattctgccagagcgaggtggttgcaggcaaccaagtcaataatctcaggaacaaacacg
caggcactgacggccaaggcagacctgctgaaagaagaggtggatgaagctatgaacaaa
atggaactctgcaaggaccaactggctgcagacatgtacagtttcttctcaaaggaaggg
gactatgcccgctactatgtaatgctcttagaggcccaagctgattatcatagaaaatct
ctgactgtgctggagagtgtcctgccaaccatccaagcacagcaagactcgtggacggag
aagccagcgtttgggacggggctggaggagcatctgaagaggagtagcagagagatcgct
ctgcccttagaggcctgcgtcatgatgctgctggagactggcatgaaggaggagggcctg
tttaggatcgcagcaggggcctctaaactaaagaagctcaaggctgctctggactgttcc
acctcacagctggaggagttctactcagacccccacgctgtcgctggagccctgaagtct
tacctgagagaactgccagaacctctgatgagcttccagctttacgacgagtggattcag
gcgtctaacgtttcagagccagacaagcgtctgcaggccctatgggttgtgtgtgatcaa
ctaccgaagaacaacaaagccaacctaaggtatctggtgaagttcctgtccaagctggct
caggacagtgaggtcaacaagatgacccctagcaacatcgccattgtactgggaccaaac
atgctgtgggccaaaacagaggggactctagctgagatggctgctgctacctctgttcac
gtggtgaccatcatagaacctatcatacagcacgctgactggttcttccctgaggatgtg
gagtttaatgtatcggggatgttcgccatgcccacccctccttccaaccactcgatggag
tacgactgttccaccatcgagaggaagaggcctggtagcatggtggggccagagaacgat
aaccctcgcaaggacagttttgctaacaaactgtcggaccataacaccgtcccccgtaga
ggcagcaacaccttaggtagaaagcagcatgcttcacccgccttccagccccccttaccc
ccggtagaggccccagggcctgggcagttcacagggtgcgtggctgagctccaggcccca
ccggggggcatggcgttggagggctgccagcctagcctggcactgagtatggctgccctg
gtggcagcgcagcagcttctcgctactaccgctgaggaactcagcaacccaaagcgtgaa
cccagttccaccccgaccctccaccagaggaacggttcaggtgggggccacccgggcaca
gccagctcagccggaggagggggagctgggggacagctgggagtgggaggccctggggct
ggatccatggggcccagtccacacatgatgcgcagaggtacaaagaagccggcccctgcc
cctcccaagccgctcaatcccccttcaggccagtccagtaaccctaccaaccaccatccc
ttctcaggccagggccagtccctcagcccctctcccagacccctctcctcctcaagccac
tcccctacctcccccatctcccagcccctaccaccccccgccgccaatccagcaaccagc
ccccatccaggcccccaaccacccgcccccacagcccccacaccctcacaggtcagtccc
ccgctccaccctagggccctcagccagcccgcaggagactacccggggcggaccagtctc
ctccagacacccccaccccgcctgacacccctccaccctccaccaccctcctggacatac
ccggtgcccatcctggcccccctctcccttccagtcaggctccctccccggccgcgccct
gtccccaaacccagaaacaggcccaacatccctccgccccctcagccccccacacaggga
aacgataccaacgggatctgcagcacagcctacaaaatcatggacccagccctgtctctc
aaaggcttgacccgagccttcatccctgagtttgctgtggaccagcagccagtgaccgcc
ccctccatgacgtccgtgccccagcccaaagactcagacctggacacagagagtaccgtt
ctataa
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