Oncorhynchus tshawytscha (Chinook salmon): 112224448
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Entry
112224448 CDS
T05605
Name
(RefSeq) tectonin beta-propeller repeat-containing protein 1
KO
K17988
tectonin beta-propeller repeat-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112224448
03029 Mitochondrial biogenesis [BR:
otw03029
]
112224448
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112224448
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
112224448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hyd_WA
Tectonin
Pex24p
PH
Motif
Other DBs
NCBI-GeneID:
112224448
NCBI-ProteinID:
XP_024243773
LinkDB
All DBs
Position
LG25:22877943..22894419
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AA seq
1216 aa
AA seq
DB search
MSVSLLWAVDVYGRVYSLSTGGQQWEQCQDAVLEFKRVTAVQQCCWGIACDHHIYLNVHS
SDVPIRYQEETYENQRWNPKDNFSDHLLPSDRWHWSDITGLEHQPLDSFLLPSTNWEWEG
DWYIDENFGGEPTEKGGWTYALDFPATYIKDKKWNSCVRRRRWIRYRRYKATDTWAKIPS
EGHSGPLPDPFNDISCGGWEISEEPRGRLSLWAVSLQGKVWFREGIHHHSPEGEGWEEVS
LPGEVVQISCGPGDLVWAVLWEGQLIVREGITRDCPQGLCWVVVDSPNPEAGAIHVAVGD
NVVWAVTKDNKVWFRRGINSHNPCGSGWIGMVGEMVMVNVGLNDQVWGISCVDRAVYFRQ
GVTSSELSGKAWKAVNVPRDGDIRSHSSASISSLHSAGCFFSGEVQAQSVMSEDLDTEGG
PQRAVLEVGTCPSSPPPEPPPIDPDVPKPRIPKVTSDSFISEMLSDRQVKQEAATTASPS
IPEEEVALGEPEAKCPPPALVLSPSLSGGLGDPQWSNVDLEETQTHLAVGPAVVRGDSAD
TCSLSSVATYTLCQGEPYGADEHPLWAWVSGGGCGVNCHSQLNWFNSATALASSVQSMSL
SISPAQTAAWRKQIFEQLSERSKREMDHFKHYEQAVEQSVWVKKGAMQWWRDWKPHKWVD
VRFALEQFSGPEGNQDGILFLYYNFNEEKKYLHAFINEVTILVPVLNDSKHTFAIYTAER
TKQRWPIRLAAATEVEMHDWLALLSVSCCDSRGIQGPPSKQAIWSVTCKGDIFVCEPSPS
LEACPYPTPCDQMFWRQVGGHLRLVECNSLGVVWGVGYDHTAWVYTGYGGGFFQGLASST
DNIFTQTDVKCVYIYENQRWNPVTGYTNRGLPTDRYMWSDATGLQECTKANAKPPSPHWT
WVADWTIDYGISGGTDREGWQYAADFPRSYHGHKTLKDFVRRRRWARKCKLTTTGPWQEV
PPIPLSDVTIVLCGAQSSVEPIPLWAISNKGDVLCRLGVTLLTPAGTSWLHVGTDQPFKS
ISIGGANQVWAIARDGSAFYRGSVSSESPAGDCWYHIPCPERQKLQQVSVGRTSVYTVDQ
NGNLWFRQGLTPSYPQGSSWEHICNNVRKVSVGPLDQVWIIADKVQGSHSLSCGTVCHRL
GVQPMEPKGQSWDYGIGGGWDHITVRGNSIEAPRVRMPSLTPSLTSSLTDPLRPPPPRSL
LPVMITEMENGNAVRC
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtccctgctgtgggcagtggatgtgtacgggcgcgtttacagcctgtccacc
ggagggcagcagtgggagcagtgtcaggatgccgtgttagagtttaagagggtgacagca
gtacagcagtgttgctggggtatcgcctgtgaccaccacatctacctgaatgtccactct
agtgatgtacccatacgttaccaggaggagacatacgagaaccagcgatggaatcccaag
gataacttctcggatcacttgttaccgagcgaccgctggcattggagtgacatcacaggg
ctggaacaccaacccctggacagtttccttcttccctccaccaactgggagtgggagggg
gactggtacattgacgagaactttggaggagaacccacagagaaaggaggttggacctat
gccttggacttccctgccacctacatcaaagacaagaagtggaactcgtgtgtccgtcgc
cggcgatggatccgctacaggaggtacaaggccacagacacctgggccaagatcccatct
gagggtcacagtggtcccctgccagacccctttaatgacatcagctgtgggggctgggag
atcagtgaggagcccagggggaggctgtctctgtgggctgtctctctacagggcaaggtg
tggttccgtgagggtatccaccaccacagcccagagggggaaggctgggaggaggtgtct
ctgcctggggaggtagtgcagatcagctgtggtcccggggacctggtttgggctgtgctc
tgggaaggacaactcatcgtcagggagggcatcaccagagactgcccacaaggcttgtgc
tgggtggtggtggactctcccaacccagaggccggggccatccacgtagctgtgggggac
aacgtagtctgggccgtcaccaaggacaacaaagtatggttcaggcgtggcatcaactcc
cataacccatgtggttcaggctggatcgggatggtcggggagatggtcatggtcaacgtg
ggcctcaacgaccaggtgtggggtatcagctgtgtggaccgggcagtgtatttccgtcag
ggtgtgacctccagtgagttgagtggtaaagcctggaaggctgtcaacgtgccccgagac
ggagacatcaggtcccactcctccgccagcattagcagtctgcacagtgctggttgtttc
ttcagtggtgaggtacaagcccagtctgtgatgagtgaagacttggacacagagggcggt
ccacagagggcggtcctagaagtagggacatgcccctcgtctcctccccccgagccccct
cccatcgaccccgacgtccccaaaccacgcatccctaaggtcaccagcgacagcttcatc
tctgagatgctctccgaccgtcaggtcaaacaggaggctgccaccactgccagtccctct
atcccagaagaggaagtcgctcttggggaaccagaggccaagtgtccccctccggctctg
gttctctcccccagcctgtctggagggcttggggacccccagtggagtaacgtggacctg
gaagagacccagactcacctggctgtggggcctgccgtggtgagaggggactcggctgac
acctgtagtctgtcctcggtggccacctacaccctgtgtcagggggagccatatggggca
gatgaacacccgctctgggcatgggtcagtggaggaggctgtggtgtgaactgtcactcc
cagctcaactggttcaactctgccacagccctggcatcatcagtccagtccatgagtctg
tccatcagtccagcccagacagctgcctggcggaaacagatctttgagcagctcagcgaa
cgctctaagagagagatggaccactttaaacactacgaacaggccgtagaacagtctgtg
tgggtgaagaaaggggccatgcagtggtggagggactggaagccccataagtgggtggac
gtgaggtttgccctagagcagttctcaggacctgagggaaaccaggacggcatcctcttc
ctctactacaacttcaacgaggagaagaagtacctgcatgcattcatcaacgaggtgact
atcttggtgccggtgctgaatgactccaaacacacgtttgccatctacacagcagagcgg
accaaacagaggtggcctatcagactggctgctgccactgaggtggagatgcacgactgg
ctggccctgctgagtgtgtcgtgctgtgactcccgggggatccagggtcccccctctaaa
caagccatctggtcagtcacctgtaaaggagacatcttcgtctgtgagccttcgcctagc
ctggaagcctgtccctaccccacaccctgcgaccagatgttctggcgtcaggtggggggc
cacctacgtctggtggagtgtaacagtctgggggtggtttggggggtaggctacgaccac
actgcctgggtctacaccggctatggagggggattcttccagggtctggccagcagcaca
gataacatcttcacccagacagatgtgaagtgtgtctacatctatgagaaccagaggtgg
aacccagtcacaggttacaccaacagaggcctcccaacagaccgctacatgtggagtgat
gcaacaggactgcaggagtgtaccaaggccaacgccaaacctccatcccctcactggaca
tgggtagcagactggaccattgactatgggatctccggggggacagaccgagagggttgg
caatacgcagctgatttcccaaggtcgtatcatggccacaagaccttgaaggactttgtt
cgtcgtagacgatgggccaggaagtgtaaactgacgaccacagggccgtggcaggaagtc
ccacccatcccgttgagtgacgtgaccatcgtcctgtgtggagctcagagcagtgttgag
ccgatccctctgtgggccatcagtaacaagggagacgtgctctgtagactgggggtcacc
ctactgactcctgccgggacgtcgtggcttcacgtgggcacagaccagccgtttaagtct
atctccatcggtggggccaaccaggtgtgggccattgccagggatggatctgccttctac
aggggctctgtgtcctcagagagccctgcaggagattgctggtaccacatcccctgtcct
gaaagacagaagctccaacaggtgtctgtggggagaacgtcggtctacactgtggatcaa
aatggtaacctgtggttcagacagggcctgactcccagctacccccagggatcatcatgg
gaacacatctgcaacaatgtacgcaaggtctccgtaggacctctagaccaggtgtggatc
atagctgacaaggtgcaaggcagccacagtctgagctgtgggacagtttgccaccgtctg
ggggttcagcccatggagccaaagggacagtcgtgggactacggcatcgggggtggctgg
gaccacatcactgtgagagggaactccattgaggctcctcgtgtccgtatgccctccctg
acaccctccctcacctcctccttaacggaccccctccgcccccctccaccccgcagcctg
ctccctgtcatgatcacagagatggagaacgggaacgctgtcagatgttaa
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