Oncorhynchus tshawytscha (Chinook salmon): 112224456
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Entry
112224456 CDS
T05605
Symbol
ccz1
Name
(RefSeq) vacuolar fusion protein CCZ1 homolog isoform X1
KO
K27045
vacuolar fusion protein CCZ1, animal type
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112224456 (ccz1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112224456 (ccz1)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Others
112224456 (ccz1)
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Gene cluster
GFIT
Motif
Pfam:
Intu_longin_1
Intu_longin_3
Intu_longin_2
TSLP
Motif
Other DBs
NCBI-GeneID:
112224456
NCBI-ProteinID:
XP_024243783
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Position
LG25:22943801..22966746
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AA seq
480 aa
AA seq
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MLMISPRMASGMQEKQYTPSLLSFFVYNPSFGSREGEEEKKILFYHPSEVEKNEKIRNVG
LCEAIVQFTRTFCPTKPAKSLHTQKNRQFFFEAEDSFWIVMVVRNPMVEKPNKDGRPPTI
EYQEEEILDTVYGAVLRECYSMYKLFNGTFGRAMEAGGVELLMQKLDKFFYRYLQTLHLQ
SCDLLDVFGGIAFFPLDKMTYLKIQSFVNRVEESLSLIKYTAFLYNDQLIWSGLEQDDMR
ILYKYLTTSLFPRHSEPELAGRDSPLRPEVAGNLLHYGRFLTGPANLKDPEAKFRFPRIF
VNTEDSYEELHLIVYKAMSAAVCFMISASVELTREFCEQLDGLVGPQLTLLASDICEQYN
VNRRISGPDKEPQFKFIYFNHMNLAEKSTIHMRKTASVSLTSVHPDLMKILGDINCDFAR
VDEDEEIIVKAMTDYWVVGKKSDQRELYVILNQKNANLIEVNEEVKRLCATQFNNIFFLD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgatcagtccgagaatggcttcgggaatgcaagagaaacagtacaccccatct
cttctcagctttttcgtctataatccttcatttgggtcacgagagggagaggaggagaag
aagattttattctaccatcccagtgaggtcgagaagaatgagaagatccgtaatgtcggt
ctttgtgaggccattgtacagtttaccagaaccttctgtccaacaaagcctgctaaatcc
ctacacacacagaagaacaggcagttcttctttgaagcagaggacagtttctggatcgtt
atggtggtgcggaacccgatggtagaaaaacctaataaagatgggagacctcccacaata
gaatatcaggaagaggaaatacttgacacagtttacggtgcagtattacgggaatgctac
agtatgtacaagctcttcaacggcacatttggcagagcaatggaagcaggcggggtggag
ctgctcatgcagaagcttgacaagttcttttacaggtacctgcagacgctgcacctgcag
tcctgtgacctgctggacgtgttcggtgggattgcctttttccccctggacaagatgacc
tacctgaagatccagtcattcgtaaacagagtggaggagagcctcagcctgatcaaatac
acagccttcctctacaacgaccagctgatatggagtggtctggagcaggatgatatgcgg
atcctgtacaagtacctgacgacgtcactgttccccagacactctgaaccagagctggct
ggtagggactctcccttaaggccagaggtggcagggaatctgcttcactatgggaggttt
ttgacaggacctgctaacctcaaagacccagaggccaaattccggttccctagaatattt
gtcaacacagaggacagttatgaggagctgcatctgatagtttataaggcgatgagtgca
gcggtttgttttatgatcagtgcatctgtggagctgacgagggagttctgtgagcagctg
gatggtctggtgggacctcagctcaccctgctggcctccgacatatgtgaacaatacaat
gtcaaccgcaggatatcagggccggacaaggagccccagttcaagttcatctacttcaac
cacatgaacctggcagagaagagcaccatccacatgaggaagacagccagtgtctctctg
acctcggtccacccagacctcatgaagattctgggagacatcaactgtgacttcgccagg
gttgatgaagatgaagagatcattgtgaaggctatgacagactactgggtggtcggcaag
aagtcggaccagagagaactctacgttatcttgaaccagaagaatgccaatttgattgaa
gttaatgaggaagtgaagaggctctgtgcgacacagttcaacaacattttcttcttggac
tga
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