Oncorhynchus tshawytscha (Chinook salmon): 112224459
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Entry
112224459 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112224459
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112224459
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112224459
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112224459
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112224459
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
112224459
NCBI-ProteinID:
XP_024243788
LinkDB
All DBs
Position
LG25:23028678..23064058
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AA seq
1227 aa
AA seq
DB search
MTIVDRSSEKSDHESVGCKRSGSLTFPGGDGNGMDGGCSSWGAGGPSSSDTPRVKTGGCM
GPTPGATVYSSSAAITADRPKEQVGFLFPSAVVLTSGDGIALPQKVLFPAERLNLKWNQV
NRIGSGLQNLGNTCFLNSALQCLTYTAPLSNYMLSREHSKTCHEPGFCMMCTMQNHITQV
FANSGNVIKPIGVLNELKRIAKHFRFGSQEDAHEFLRYTVDAMQKSCLPGSKLDRQTQAT
SFIHQVFGGYLRSRVKCLNCKAVSDTFDPYLDVALEIKTAPSITKALEQFVKPEQLDGEN
AYKCTKCKKMVPASKRFTIHRSSNVLTISLKRFANYNGGKIAKDVRYPECLDLRPFMSQS
HGEPQVYVLYAVLVHSGFSCHAGHYYCYVKASNGQWHQMNDSSVSVSDIRSVLNQQAYVL
FYIRSPDLKNGGDYNHMSRPPGQSSPRPILTPRVNIGPRHTNTCFIGPQLPPHMAKNTFH
INGNGSLRDFPSGSKPSSGSSSMGKTSYGLLSSSSSSSHSLSCPTGIPDTAKRQKLSFFI
GQGKQIRPSSSSYAQPSSCSSSQTTSDMSAPRAPCINGTPSVNGNGHGASFLVPYGQESS
EESDQEGGSGLENGTTKPHVNGRKGGPVPRLLALKPNGISNGQATMHHNGSGTNGSSKLS
QIGHQNGHHKVNGIKHPEKVNGHVLSPGLGSSSSNGAESHHSGPSKEVYSAIPSQDSPSQ
SLHSADSDSHLPPTPEKRTKTHSDPLPHHPPSTTANPPSSLADVGAKPPTDTMRESSSTS
NPGALPLQPTPHSLRTLVSPAFSQPLSGPGLGTTKGLGAPHSRSGEDVRETENSPAAGLD
GRLDGKPSSREGRDRMYSSDRDKGRDRLYSSDRDKDGDRLYSSDRDKDGERNGYHRDMSR
ERNWDRDSDRYRHRRDHRDREHHRDREHHRSYRDRSASRDRHWESERRWERNAYHPRDRD
RCHHHRPRENRERDKREHSLPHREEPHGRSRLRGERGERKDRGDGKRGCYPSQEEGPLPT
PLSSNTKPSQPPTSPDLSPARPALEKRPDPLREDSVEERRAKKHKKSKKKKSKDKARRRE
NGTSDVDSSDRAADGSRSSKHKKKKKKKKRRHDTNMEDEKSRSIQSSEGHRDPNAPRESR
RASNSDEERASRKRRYQDDDGSDNSYPEKHHRSDDDDNKDRFFSRNISPTATSHNASHHH
LNGHTGNGFSRPNGNSHGCSTNGLYNE
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagagaaatctgaccacgagtcagtcgggtgcaagcgc
tccggatcgctgaccttccccggcggcgacgggaacgggatggacggcgggtgctccagc
tggggggcggggggtccctcatcctctgacacccccagggtgaagaccgggggctgcatg
ggcccaacccctggagccactgtctacagcagcagtgctgccatcaccgcagacaggccc
aaggagcaagttggtttccttttcccctccgcagtggtgctgaccagtggggatggcatc
gccttgccccagaaggtgctgttcccggccgagcggctcaacctgaagtggaaccaggtc
aaccgcatcggatcaggtctccagaacctgggcaatacctgcttcctcaactcggctctg
cagtgtctcacctacactgctcccctcagtaactacatgctctcccgggagcactctaaa
acgtgtcacgagcctggattctgtatgatgtgcaccatgcagaatcacatcacccaggtc
tttgccaactctgggaatgtcatcaagcccatcggagtcctcaatgagctcaaacggatt
gcaaagcatttccgttttggtagccaagaggacgcccatgagttcctgcggtacacagtg
gatgctatgcaaaagtcctgcctgcccggaagcaaattggacaggcaaacacaggcaacc
agtttcatccatcaagtctttggagggtatctaaggtccagagtaaaatgtttaaactgc
aaagcagtctctgacacgtttgacccttatttggatgtcgctttggaaatcaagactgct
cccagtatcaccaaagcactggagcagtttgttaagcctgagcagctagatggagagaat
gcctacaaatgcaccaagtgtaagaagatggttccagcctctaagagattcaccatccac
cgcagctccaatgtgctcaccatctcactgaagcgcttcgccaactacaacgggggcaag
atcgctaaggatgtgaggtatcctgagtgcctggacctgcgtcccttcatgtctcagtcc
cacggggagccccaggtctatgtgctctacgctgtcctggtgcactctggcttcagctgc
cacgctggacactactactgctacgtcaaggctagcaacggccagtggcaccagatgaat
gactcctctgtatcagtcagtgacatcagatcagtcctcaaccagcaggcgtacgtcctc
ttctatatcaggtcacctgatctgaagaacggaggggactacaaccacatgagtcggccc
cctggacagtcgtccccccgccccatcctcacaccccgggtcaacattgggccacgacac
accaacacttgcttcataggaccacagctgcccccacacatggccaagaacacctttcac
atcaatgggaacggctccctaagggacttcccctctggctctaagcccagcagtgggagc
agcagcatgggcaagactagctatggcctgctctcctcttcttcctcttcctctcattct
ctaagctgtcctacaggtatccctgacactgccaagcgtcagaagctctccttcttcatc
ggtcagggcaaacagatccgcccctcatcatcctcttacgcccagccgtcctcctgttct
tcgtcacagactacctcagacatgtccgcgccccgggctccttgcataaacggtacaccc
tccgttaatggaaatggtcatggagcctcattcctggtgccgtatggccaggagtcatcg
gaggagtctgaccaggagggaggcagcggtctggagaacggcacaaccaagcctcacgtt
aacgggaggaagggagggcccgtccccagattgctggccctcaagcccaacggcatcagt
aacggccaggccaccatgcaccataacgggtctgggacaaacggctcctccaaactcagc
cagatcggacatcagaatggacaccacaaagttaatggcatcaaacacccggagaaggtc
aacggtcatgtactgtctcctgggttgggttccagcagttctaatggggcggagtctcac
cacagtggcccaagcaaagaggtgtatagtgccatccccagccaggacagcccgtctcag
agcctccacagtgccgacagcgatagccacctccccccaaccccagagaaaaggactaaa
actcactctgaccccctccctcaccacccaccatcaaccactgctaacccgccatcctca
ttggccgatgttggcgctaagccacctactgacaccatgagggaatccagctccacctcc
aaccctggggccttacccctccagcccaccccccactccctcagaaccctagtctctcca
gccttctcccagcccctctctggaccaggcctggggaccacaaaaggcctcggagcacca
cacagcagatctggtgaggatgttagggagactgagaacagcccagcagcagggctggat
ggacggctggacggcaagcccagctccagagagggaagagaccggatgtattcttctgat
cgggataaggggagagaccgactatattcttcggaccgcgataaggatggagaccggctg
tactcttctgaccgggataaagacggagaaaggaatgggtaccaccgtgacatgagccgt
gaacgcaactgggaccgtgactcagaccgctatcgacaccggcgggaccacagagatcga
gaacaccaccgagaccgagaacaccaccggtcgtaccgtgatcgctcggccagccgggac
agacactgggagtcagagcgtcgctgggagaggaacgcctaccaccccagggacagggac
cgctgccaccaccacagacccagagagaacagggagagggacaagagggagcacagcctc
ccccatagagaggagcctcacggacgctccaggttgaggggggagaggggtgaacgtaag
gacaggggtgatggtaagaggggttgctacccttcacaggaggagggccccctgcccacc
ccactaagctccaacaccaaacccagtcagccccccactagcccagacctctccccagcc
agaccagctctggagaaaagacccgatcctctgagagaggacagcgttgaggagcgtcgg
gccaagaaacacaagaagagcaagaagaagaagtccaaggacaaagctaggcgtcgagag
aatgggacctctgatgtggattcctctgacagggctgccgatggcagcaggtcctccaaa
cacaagaagaagaagaagaagaagaagaggaggcacgacactaacatggaggacgagaag
tcccgctctatccagagttccgaggggcaccgtgaccccaacgccccccgggagagtcgc
agggcgagcaacagtgacgaggagagggcgagcaggaagcgacgttaccaggacgatgat
ggctctgacaatagctaccccgagaaacaccatcgctccgatgacgacgacaacaaagac
cgcttcttctctcgcaatatatcgccaacagccacctctcacaacgcatcgcaccaccac
ctcaacgggcacacaggtaatggcttcagtcgacccaatggaaactcccacggatgttct
accaatggactgtacaatgaatga
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integrated database retrieval system
