KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112224481
Entry
112224481         CDS       T05605                                 
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010  MAPK signaling pathway
otw04145  Phagosome
otw04148  Efferocytosis
otw04310  Wnt signaling pathway
otw04370  VEGF signaling pathway
otw04510  Focal adhesion
otw04520  Adherens junction
otw04530  Tight junction
otw04620  Toll-like receptor signaling pathway
otw04810  Regulation of actin cytoskeleton
otw05100  Bacterial invasion of epithelial cells
otw05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    112224481
   04310 Wnt signaling pathway
    112224481
   04370 VEGF signaling pathway
    112224481
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112224481
   04148 Efferocytosis
    112224481
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112224481
   04520 Adherens junction
    112224481
   04530 Tight junction
    112224481
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    112224481
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    112224481
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112224481
   05100 Bacterial invasion of epithelial cells
    112224481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112224481
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112224481
   04031 GTP-binding proteins [BR:otw04031]
    112224481
Membrane trafficking [BR:otw04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    112224481
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    112224481
  Macropinocytosis
   Ras GTPases
    112224481
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    112224481
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112224481
  Exosomal proteins of other body fluids (saliva and urine)
   112224481
  Exosomal proteins of colorectal cancer cells
   112224481
  Exosomal proteins of bladder cancer cells
   112224481
GTP-binding proteins [BR:otw04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    112224481
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU CagD
Other DBs
NCBI-GeneID: 112224481
NCBI-ProteinID: XP_024243827
LinkDB
Position
LG25:23124297..23133713
AA seq 192 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKRKRKCSLL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcaggccatcaagtgtgttgtagtgggggacggagctgtgggtaaaacatgcctgctc
atcagctacaccaccaacgcgttccccggggaatacatccccacagtctttgacaactac
tctgccaatgtgatggtagatgggaaaccagtgaatctgggtctatgggatacagcagga
caggaagactacgacagactcagaccactgtcctatccacagacggatgtgtttttgatc
tgtttctctctcgtgagtcctgcctcctttgaaaacgtccgtgccaagtggtacccagag
gtgagacaccactgccccaacaccccaatcatcctggtgggcaccaagctggatctgaga
gatgacaaggacaccatcgagaagctgaaggagaagaaactcacccccattacctacccc
cagggtctggccatggcaaaagagattggagcagtaaagtacctggaatgctcagccttg
acacagcgtggccttaagacagtgtttgacgaagccatccgggcggtcttgtgtcccccg
cccgtcaagaagaggaagagaaagtgttcactactctaa

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