Oncorhynchus tshawytscha (Chinook salmon): 112224510
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Entry
112224510 CDS
T05605
Symbol
sgca
Name
(RefSeq) alpha-sarcoglycan
KO
K12565
alpha-sarcoglycan
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112224510 (sgca)
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Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
FAM163
DAG1
Syndecan
Motif
Other DBs
NCBI-GeneID:
112224510
NCBI-ProteinID:
XP_024243874
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Position
LG25:25891959..25904448
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AA seq
400 aa
AA seq
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MADWTGWRFILTVCVTSVLVVKADIKAYTPVGQLFVFELQREAFQNEFEPFLKHYGRVYN
DPMLFKCNMQSFPDLPGWLRFTQRHHYDNGFLYGTPLAQGKSMIEITVTNKRSYDTFRDR
LIITIDPPAKRMPYQAEFFIPLREIEKVLPSTVQEEIRQDMMRMWKTDRLDFVNITSALD
RGGRVPLPLAGHYEGVYVKVGSDQYFSECLLRLQTAEHRRQCEAGGRAKIPGDCKVCSYP
GNCVTWCKSTLIDLSRPVIPPPAPTMGPGILDAGGVYDPPESPPPRDFLPDYIVTVIVPL
ALAIILCLLLAYIMCCRREGVERRDGKTPDIQLYHHHTIHGNTSELRSMAGCRGVPPPLS
TLSMFNARTGETAPPFQTDSPSIPLILAQQEINTDTLPRK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcagactggacaggctggagatttattttaacagtgtgtgtgaccagtgtactagtg
gtcaaggcagacatcaaggcttatacccctgtgggacagctgtttgtgttcgagctgcag
agagaggccttccagaatgaatttgaacccttcctgaaacactatgggcgggtctacaat
gatcccatgctgtttaagtgcaacatgcagtccttcccggacctgcctggctggcttcga
tttacccagaggcaccactatgataacggcttcctctacggcaccccactggcccaggga
aagagtatgatagagatcacagtgactaacaaacggagctatgacacattcagagacaga
ctgatcataacgattgaccctccagcaaagagaatgccctaccaggctgagttcttcatc
ccactgagggagattgagaaggtgctgccctctacagttcaggaagagatcaggcaggat
atgatgaggatgtggaagacagacaggctggactttgtcaacatcacgtctgcgttggac
cgaggtggccgtgtccctctgcctctggctggacactacgaaggggtgtatgtgaaggtg
ggttcagaccagtacttctctgagtgcttgttgaggctccagactgctgaacataggaga
cagtgtgaggccgggggcagggccaagatccctggggactgcaaggtctgctcctaccca
ggcaactgtgtcacctggtgcaagtccacactgattgatctgtccagaccagtgatcccc
cctcctgcccccaccatgggcccaggtatcctggatgctgggggggtctatgacccacct
gagtccccccctcccagagacttcctgccagactacattgtgactgtgatcgtccccctg
gctctggccatcatcctgtgtctcctactggcctacatcatgtgctgcagacgagaggga
gttgagagaagagatggaaagacaccagatatccagctctaccaccaccacaccatccat
ggtaacaccagtgagctgcggagcatggctgggtgtcgtggggtccctcctcccctctcc
accctgtccatgttcaacgctcgcaccggggagacggccccaccgttccagactgacagc
cccagcatccccctcatcctggcccagcaggaaatcaacactgacacactacccaggaaa
tga
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