Oncorhynchus tshawytscha (Chinook salmon): 112224521
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Entry
112224521 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 27 isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112224521
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112224521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
WW
PH
PH_9
SH3_1
SH3_9
Motif
Other DBs
NCBI-GeneID:
112224521
NCBI-ProteinID:
XP_024243888
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All DBs
Position
LG25:complement(26395337..26426870)
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AA seq
1030 aa
AA seq
DB search
MEMVQVEFEYEYTARDGALVSIKPKDMYILVSRTNEHWWHVQKDQSTKPFYIPAKYVREL
SVETQGQLDVTDPGTQSHTSLQATTDREPTKMSNKGQRPGTVVRVHVSTDHSARSLSTHR
KSTFRVSQDINDIERYEHVKTMVELQTSNNETRHSPPCDEEVIKKHSLVPGVSFNSASDT
PGLGNLLQHPSLKLLVPPEPTSVLPQLQSGHSPFIKDPVEQQNSDGWMMKTLAGDPSGQS
HLYQDPDIYETISDIPLSEMTDIVGTEPAGSLGATKTPAEQQSLDQTCGPIDVTAPSLSD
QVDNESAQNAVYVNVAELHRNVSESPLSASSPPCSPPYLDSEGWEVHTDQESGQEYYYHP
ESGQTTWDNPHIDPEAPAEEPVCSSPSPSSQSPTSTSVSPPAWTTDWEQCLDVTSGRQYF
YNPVSGETSWEPPEPQCPYPPLMEPLSGHSSLEEGPPPLPEEDYPAEADLPESLEEEPLA
LSPVDPHSFHNDYNPSHVIQAVIPRASLDRSAPTGWNLNVDPDGTWVFSSKHTPEQWIKS
LDDRGQTYYYLRDGSKSQWNLPEAPVASGQSKVGNGVALDGGSLSMKNWRHTMGPAHFSS
TMEERKFFPNHRRNASDYGSEGSSADNSPEMGQHHVQSLEKAGILNKTKVSENGKRVRKN
WTQSWTVLHGGVLTFHKDPKSAATGASNKTNQIAPEVTVELRGATIGWAPRDKSSKKNVV
ELKNRNGVEFLIQYDTESIINDWHKVLVDTIRQLDQDHHQSEEEDVDISEKSSGTDRDDR
SPGTLDKRRISSRPSTATSSGGETDQKKVRTKLIKFLLKRPTLQSVKEKGYIRDNVFGCH
LAALCSQEKTTIPSFVEKCIRAVEKRGLDMDGLYRVSGNLAVIQKLRFKADHEELDLEDG
QWEDTHVITGALKLFFRELPEPLFPFSHFSHFIQAIRTVDYTLKASYMRELVESLPRPNH
DTMELLFSHLRKVINYGEENRMTVQNVAIVFGPTLLRPEMESANIAMHMVFQNQIVELVL
NEYEYIFHSS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggagatggtgcaggtggagtttgaatatgagtacacagccagggacggggctctggtc
tccatcaagcccaaggacatgtacatcctggtctccaggaccaacgagcactggtggcac
gtccagaaggaccagagcaccaagcccttctacatccctgcaaagtatgtgagggagctc
tctgtggagactcagggccaactggacgtcaccgatcctgggactcagagtcacacatcc
ctgcaggcaacgactgacagagagccaacgaagatgtctaacaaaggtcaaaggccaggc
actgtggtcagggtccacgtgtccacggatcactctgcgagatcactttccactcacagg
aagtccacgttcagagtctcacaagacatcaatgatatcgagcggtatgagcacgtgaag
acaatggtggaactgcagacctccaacaacgagactagacatagcccgccatgtgatgaa
gaagtgataaagaagcatagtttagttccaggtgtctcattcaactcagcctcagacact
ccaggtcttggcaatttgctgcagcacccttccctaaagctccttgtcccacccgagccc
acaagtgtacttccccagttgcagtcaggccattctccgtttatcaaggatccagttgaa
cagcagaactccgacggctggatgatgaaaacactggcaggggatcctagtgggcaatct
catttatatcaggaccctgatatctatgagactatatcagatataccactctcagagatg
acagacatagtgggaacagaaccggctggatctctgggtgcaacgaaaacaccagcagaa
cagcaaagcctggatcaaacctgtggcccgattgatgttacagccccttctctttcggat
caggttgacaatgagagtgcccagaacgctgtgtacgtcaatgtagcggagctccacaga
aacgtgtctgagtcccctctctcggcttcctcccctccctgctctcctccttacctggac
tctgagggatgggaggtgcacactgaccaggagagtggacaggagtattactaccaccct
gaatcggggcagaccacctgggacaacccccacatagaccctgaggctcccgctgaggag
cctgtgtgttcgtctccctcgccctcctctcagtcccccacctccacctctgtctccccc
cctgcatggaccactgactgggagcagtgtttggatgtgactagcggccgccagtacttc
tacaacccagtatcgggagagacgtcttgggagcccccagagccacagtgcccctacccc
cctctgatggagccgctgagtgggcacagctctctggaggaagggccgcctcccctgccc
gaggaggactacccagccgaggctgacctacctgaatccctggaagaggagccattggct
ttgtccccagtggaccctcactccttccataacgactacaaccccagccatgtgatccag
gcagtcatccccagggccagcctggacaggagcgctccaactggctggaacctcaatgta
gaccctgatggaacatgggtgttctccagcaaacacacacctgagcagtggatcaaatca
ttggacgacagaggacagacgtactactacctgagagacggctccaaatcccagtggaac
ctgcctgaggcccctgtagcatcaggccagtctaaggtgggaaatggtgttgcgctggac
ggggggtctctatctatgaagaactggagacacaccatgggtccagctcacttcagctca
accatggaggaaaggaagttcttcccgaatcacagaagaaatgcctccgactacggcagc
gagggttccagtgcagacaactctccagagatggggcagcatcacgtgcagagtttagaa
aaagctggaattctcaacaaaactaaagtgtcagagaatgggaaaagagtaaggaaaaac
tggacccagtcttggacggttcttcacggaggggttctgaccttccacaaagaccccaag
tctgcagccacaggagcctcgaacaagaccaatcaaatcgccccagaggtcacagtggag
ctacgaggtgcaacgattggctgggctcccagggataaatccagcaaaaagaatgttgta
gagttgaaaaacagaaatggtgttgagtttctgatacagtacgacactgagagtatcatc
aacgactggcacaaagttctagtcgacactattcgacagctggaccaggatcatcaccaa
tctgaggaggaggacgtggacatcagtgagaagtcctccggtacagacagagatgacagg
tcaccaggcaccctggacaagaggaggatatcttccagaccgagcacggccacctcctct
gggggagagacagatcagaagaaggttcgtaccaagctgatcaagttcctcctgaaacga
cccacgctgcagtccgtcaaggagaagggttacatccgagacaatgtgtttggctgtcat
ctggctgcactgtgttcccaggagaaaactactatcccaagctttgtggagaaatgtatc
cgagcagtggaaaagagaggtctggacatggatggactctacagagtcagtgggaaccta
gctgtcattcagaaactacgcttcaaggcagatcatgaggaactggacttggaggatggc
cagtgggaggacacccacgtcatcactggggctctgaagcttttcttcagggagcttcct
gaacccctcttccccttcagccacttcagccacttcatccaggccataagaactgttgat
tacaccctcaaagcatcttacatgcgagagctggtggagtctcttcctcggccaaaccat
gacaccatggaactcctcttcagccatttacgcaaagtgataaactatggagaagagaac
cgtatgactgtgcagaacgtggctatcgtctttggtcccacgctgctccggccagagatg
gagtcagccaacatcgccatgcacatggttttccagaaccagatagtggagctagtcctg
aacgaatacgaatacatcttccattccagttga
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