Oncorhynchus tshawytscha (Chinook salmon): 112224534
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Entry
112224534 CDS
T05605
Symbol
abcb10
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112224534 (abcb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112224534 (abcb10)
Transporters [BR:
otw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
112224534 (abcb10)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_21
AAA
AAA_29
DUF87
Zeta_toxin
AAA_25
RsgA_GTPase
nSTAND1
AAA_33
AAA_5
P-loop_TraG
NB-ARC
Motif
Other DBs
NCBI-GeneID:
112224534
NCBI-ProteinID:
XP_024243911
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All DBs
Position
LG25:complement(26747626..26755225)
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AA seq
717 aa
AA seq
DB search
MGLLLLQLSKCPGVNILKREVHSRVHKLFWLECQTSRGQREVSGKRFEPVARSSLSHPRR
CNSLVPCVPLRQFTIPPHLLRNSWTATVHFANYSSSTDSKQATQQEVDSKDLQSTETKQS
PTRIPTEDVKRILQLAHPERLRLSAAVGFLMVSSAVTMSAPFFLGQVIDTIYTSSSEDFS
ASLRSLCIMLSGVFLCGGAANAARVYLMQISGQQIVRNLRVFLFSSILRQEVGFFDKTRT
GELINRLSADTALIGRSVTDNLSDGLRAVAQATAGVSMMFYVSPSLAAFVLLIVPPMAGL
AVIYGRYLRSISKRTQDSLAEATQLAEERISNMRTVRAFGKELTEVAKYTEKANYVLHLA
KQEAVLRAGFFGATGLSGNIIILSVLYKGGLLMASEHMTVGELSSFLMYAFWVGISIAGM
SSFYSELMKGFGAGARLWELLDRKPEFPLNEGIVLRPEQLKGQLEFQNVSFAYPTRKDAP
IFQDLSLSVPAGSVMAVVGPSGSGKSTLVSLLLRLYDPVAGVITIDGHDVRDLNPYWLRS
HIGTVSQEPVLFSCSIAENIAYGAPDSGTVTVQEIHRAAQIANAYEFVRGFPKGFDTVVG
EKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEFLVQEALERLMDGRTVLII
AHRLSTIQNADAVAVLDQRRVVECGQHAQLLGNRQGLFRKLMEKQAFLQEGQKQALR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggactgttgctgttgcaattgtcaaaatgtccaggcgtgaatattttgaagcgcgag
gttcactcccgtgtacataaactattttggttagaatgccagacgtccaggggacaacga
gaggtgagtgggaaaaggttcgaacctgtggcacgctcttcgctttcacacccgaggaga
tgcaactctcttgtgccctgtgtaccacttagacagttcaccatacccccccatttgttg
aggaactcatggacagcaactgtacactttgccaactacagctcttcgacagactcaaaa
caagcaacacaacaagaagttgacagcaaagatctgcagtcaacggaaacaaaacaatct
ccaactcggatacccactgaggatgtcaaaaggattttacaacttgcccaccctgagcgc
ttgcgactgtcagcggctgtgggcttcctaatggtctccagcgctgtcacaatgtcggca
cccttcttcctgggccaagtcattgacactatctacaccagctcttcagaggacttcagt
gcctccctccgctctctgtgtatcatgctttcaggggtattcctttgtgggggtgccgct
aatgctgcccgtgtctacctcatgcaaatctcaggtcaacagattgtgagaaatctacgt
gtattcctattctcctcgattctgaggcaggaggtaggtttctttgataagacccgtacc
ggggaactcattaaccgcctatctgcagacacggcactcatcggccgctccgtcacagac
aacctttctgacgggctccgcgctgtcgcccaggcaacagctggggtcagcatgatgttt
tacgtgtcaccaagtttagcagcctttgtgctgctgattgtgcctcctatggctggccta
gctgtcatatatgggagatacctgcgctccatatccaaacgtacacaggactctctggct
gaggccacacagttggcagaagaacgcattagcaacatgaggacagttcgggcgtttggt
aaggagctgacagaggtggccaagtatacggagaaggccaactatgttctccaccttgcc
aaacaggaagccgttttgagggctggcttctttggcgcgactggactcagtggcaacatc
atcatcctgtcagtgctgtataagggagggctattgatggccagtgaacacatgactgtg
ggagagctctcttccttcctcatgtacgccttctgggtgggcattagcattgcaggtatg
agctcgttctactctgaactgatgaagggctttggcgcaggggcacggctttgggagcta
ctggacaggaagcccgagttccccctcaatgagggtattgtactgaggccggagcagctt
aagggtcaactggagttccagaatgtctcctttgcctacccaacccgcaaagacgccccc
atcttccaggacctgagtctctctgtgcctgctggctccgtcatggccgtggtagggccc
agcggatcgggcaaatccactctggtctccctgctgctcaggctctacgacccagttgca
ggtgtgatcactatcgacgggcatgatgtgagagatttgaatccttattggctgaggagt
cacattggaactgttagtcaggagcccgtactcttctcctgttccatcgctgagaacatt
gcctatggagcgcccgactctggcacggtcacagttcaggaaatccaccgggctgcacag
atcgccaacgcttatgagtttgtccgaggtttcccaaaaggctttgacactgtggtggga
gagaagggtgttcttctctcaggtggtcagaaacagagaattgctattgcaagggctctg
cttaagaaccccaagatacttctacttgatgaggctacaagtgccctggatgcagagaat
gagttcctggtccaggaggctctagagcggctcatggatgggcgcacagtgctgatcatc
gcccaccgcctctccaccatccagaacgctgacgccgtggctgtgctcgaccagcggcgt
gtggtggagtgtgggcagcacgcacagctcctgggcaaccgccaaggcctcttcaggaag
ctgatggagaaacaagccttccttcaagaggggcaaaagcaagcgttgcgttga
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