Oncorhynchus tshawytscha (Chinook salmon): 112224585
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Entry
112224585 CDS
T05605
Symbol
lhcgr
Name
(RefSeq) lutropin-choriogonadotropic hormone receptor isoform X2
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04080
Neuroactive ligand-receptor interaction
otw04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112224585 (lhcgr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112224585 (lhcgr)
04081 Hormone signaling
112224585 (lhcgr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112224585 (lhcgr)
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
112224585 (lhcgr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
SPATA2_PUB-like
Motif
Other DBs
NCBI-GeneID:
112224585
NCBI-ProteinID:
XP_024243988
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Position
LG25:29124302..29155050
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AA seq
728 aa
AA seq
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MMSISLLFLFYPSVLLFFGFGCRYSSSFVCPGICRCSANTIRCNNITEKSVPTSERGPRL
VLKHLTMSTIASHTFDGLRRVQHIEIGQSVALETIETLAFNNLLDLNEIFIKNIRSLVHI
ARRTFNNLPKLRYLSISNTGITVFPDMTSIHSLEPWNQNFVLDICDNLYLLSIPVNAFVG
MTTEYTAMNLFNNGIREIQDYAFNGTKINKLVLKNNRNLQVIHREAFKGAVGPRILDVSS
TAIETLPSHGLNSVVELVARTAYGLKRLPPFRDLGNLQKAHLTYNSHCCALLTWDTHRDS
PINAAQHNGFRPTYCDDSPYEKFPAGMVDSSDTSLLVEIHGTNEDVEDESYGGVDFQYPE
LGLNCQTRPTLQCTPEADAFNPCEDIAGFSFLRVAIWFINILAIIGNLTVLLIFFTSRCK
LTVPRFLMCHLAFADFCIGVYLLMIAAVDLHTRGHYSEHAIDWQTGAGCSAAGFLSVFGG
ELSVYTLSTITLERWHTITHALQLEKRLGLAQAAVIMAGGWLICLGMAMLPLVGVSSYSR
VSMCLPMDVKTPLAQAFILLLLLFNVGAFLVVCVCYVLIYLAVRNPQFPSRSADAKIAKR
MAVLIFTDLICMAPISFFAISAAFKVPLITVTNSKILLVLFFPINSCANPFLYAIFTKAF
RKDVYLLLSNMGCCENKANMYRMKAYCSENLVKSSSGNKGTLICTTLRMDPTPLQSQQTK
DDRDLGTI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgatatcgctgttgttcctgttctacccgtctgttttgctcttctttggcttt
ggctgccggtactcttcgagctttgtgtgtccgggaatctgccggtgttccgccaacacc
ataagatgtaacaacatcacggagaagtccgttccaacgagcgaaaggggtccaagactc
gtcctgaagcatctgactatgagcactatagccagccacacctttgatggcctgagaaga
gtccagcatatagaaatcggtcaaagtgttgccttggaaactatagagacccttgcattc
aacaatcttctcgacctcaatgaaatcttcattaagaacatacggagcctggtgcacatc
gctcgaaggacgttcaacaaccttcctaagctgcgttatctgagtatatccaacactggg
ataacagtgtttcctgacatgacttctatccattctctggaaccttggaaccaaaatttt
gtcttggatatctgtgacaacctctatcttctgtcaataccagtaaatgctttcgttggc
atgacaactgaatatactgcaatgaacctgttcaacaatggcattagagaaatacaagac
tatgcctttaatgggaccaagataaataaattggttttgaagaataaccgaaacctccaa
gtgattcatcgggaagcttttaaaggagcagtgggccctaggatactagatgtctcgtcg
acggcgatagagactttgccatcccatggcctcaattctgtcgtggagctggttgcccgt
acagcctatggcctaaagagactaccccctttcagggatctgggcaacctgcagaaggca
cacctcacctacaacagccactgctgtgccttactcacctgggacacacacagggattct
ccaatcaatgcagcacaacataatggatttaggcctacgtattgtgatgacagtccgtat
gaaaagtttccagctggtatggtggactcatccgacacatccttactggtggaaatacat
ggaacaaacgaagatgtcgaagatgagtcctacggaggtgtggatttccagtatccagaa
ctagggttaaactgtcagaccagaccaaccctccagtgtacaccagaggctgacgccttt
aacccgtgtgaagacatagcaggtttcagttttctcagagtcgccatctggtttatcaac
atcctggcgatcattggcaacctgacagtcctcctcatcttcttcaccagtcgctgtaaa
ctcactgtgccacgcttcctcatgtgtcacttggccttcgctgacttctgcatcggcgtc
tacctgcttatgatcgccgcggtcgacctccacacccgaggccactacagtgagcacgcc
atcgattggcagacgggagcaggttgtagtgcggcgggcttcctgtctgtgttcggtggg
gagctgtcggtgtacacgttgtcgactatcactctggagcgctggcatacgataactcat
gccttgcagctggagaagaggctaggcctggcgcaggctgctgtcatcatggctggaggg
tggttgatctgtctggggatggccatgctccccctggtgggggtcagcagctacagcagg
gtgagcatgtgccttcccatggatgtaaagactcctctggcccaggctttcatcctcctg
ctcctcctcttcaacgtgggggcgttcctggtcgtctgcgtctgctatgtcctcatctac
ctggcagtacggaacccccagttccccagccgcagtgcagacgccaagatcgctaagcgc
atggctgtcctcatcttcaccgatctcatctgcatggcacccatctcgttcttcgctata
tccgcagcctttaaggttccgctcatcactgtcaccaactccaagatactcctggtgttg
ttctttcctatcaattcctgtgccaaccctttcctctatgccatctttactaaggctttc
aggaaagatgtctatctgttactgagtaacatgggctgctgcgagaataaagctaatatg
tacaggatgaaggcctattgctctgagaatttggtgaagagtagttctgggaacaagggg
actctgatttgtacaacactaaggatggaccctacgccattgcagagccaacagacgaaa
gacgatagagatttggggacaatctga
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