Oncorhynchus tshawytscha (Chinook salmon): 112224601
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Entry
112224601 CDS
T05605
Name
(RefSeq) AF4/FMR2 family member 3-like isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112224601
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112224601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
Motif
Other DBs
NCBI-GeneID:
112224601
NCBI-ProteinID:
XP_042175803
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All DBs
Position
LG03:67831595..67893997
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AA seq
1433 aa
AA seq
DB search
MPTVLRGTGKLSIVCSLIRCASQVTGSERNGCSKDILGDMTHSWPSQQPSGGSQAQRFPY
NPKEAKQHTTQQTWENVQQLRMTQPHVAPHKSMLADDLKLSSDEEDADKDPEQSASWTGN
NSLSEQHTHTHGGRVRHSCSDSSGSDSSGSDSSSESEEESSSQRLRSPSPETHSDPGTPT
DAQSLGCTEETDHPPTTQWQLDKWLKKVRKKSSSWDSSNRDHTQRATEHSLPSPNPHRAP
SPARSWGTREDYSPGQSPVPSPHFNYSPRHSPRPSPRPSPRPSPGYSPCPSPCHSPRHSP
ILSPVPSVCLSPCLSPRANRDPSPIPRHPPKSPSPSLTQSSSRHYPQVRSLLQESFRPLT
RPSLTSSPSHRPKIRIAPAPSFESKSKLRHSSSPQPPLQHGSRPKPKQSQSVPTPKITAK
AAPALSTEPSHRPRPSPNSSPRLHSQPRLKHNPILALKTSQQLTTSGQRPKESSRLSHNS
NSKPRPKFGPSLTTSLSTSPSPTPRAKTLPPADPSREPSSRVGRSSKSSPKPHSRPISKS
GSGPSSRSSPSPIPKVKSRENTAPHPKPPQRKPQSREREREVDNRRETQAADRKADRQAE
GRGRGNVERPGERPGEKQGERRLAEDKLLRRPWVQSSEEEEDVEERKRRREEREKEEKRR
RRKEQQRGEWQAVQPKQRPHTNSERHRNPIDPQRPGTKKKRRRKSEEEERESQPDPSLPP
SPSSPTPVIPSTDSSSSSSSSSESDSEPSLPPNVAKVPADSTSSQRPIPRRGHQGPGRPS
DIRPGVLYPTATSNQDHGPQSQAKQKLYTLVPFGRSEQAPSSHRGLRNLVVQLNLSLLSR
VPDTTTDTPASHKHPSSSSSKQKEAMRHLYTPETEGGDSRRKRKSENGIQHHRESKRSNS
NTNGPSAHTESTANRVSKWSNSHTNGPSAHTESTANRESKRSNSQTNGPSAHTESTANRV
SNRSNSQTNGPSAHTESTANRESKRSNSHTNGPSAHTESTANRESKRSNSQTNGPSAHTE
STANRVSNRSNSQTNGPSAHTESTANRESKRSNSQTNGPSAHTESTANRVSNRSNSQTNG
SSAHTESTANRCLDPHTDARHNRFLEDYLDSKRPLSPLSPLSDTPDPTKPPIKTQPPVQH
YTNSEVPRNHAKMEVECVGVSGKPPHMCESWGPPLQRAGSQRGTVLNHEPPHHAEYYMHE
AKRMKHRADAMVDKLGKAVNYVDAALSFMECGKAMEEGPLEDKSPYTMYTETVELIRYAM
RLKNHSGPGARQEDKQLAVLCFRCLALLYWQMFRLKKDLAMKYSKALLEYFKSSPKVPTT
PPIWSGSGKGTGGPPSSLSPSPSALPLGSSPSSLINIPLRIHQMAANHLNITNNVLYSYE
YWELAESLVRDNNEFFNYLNTLSGPLTLHSSIAHAVQYTRQGLQWIRISASVG
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagtcctccgcggcacgggaaaactttccatcgtgtgttcactgattcgttgc
gcatctcaggtcacaggaagtgagcgtaacggctgttccaaagatattctaggggacatg
acccattcctggccatcccagcaaccctcaggagggagtcaggcccagcgcttcccctat
aaccctaaggaagcaaagcagcacacaactcagcaaacttgggagaatgtgcagcagctg
aggatgacccagcctcacgtggcgcctcacaaatccatgctcgctgatgacttgaagctc
agcagtgacgaggaggatgctgacaaggaccctgagcagtcagcctcctggactggtaac
aatagtctgtcagagcagcacacacacacacatggtgggagggtgagacattcatgctca
gactcttcaggctcagactcttcaggctcagactcctccagtgagtcggaggaggagagc
agtagccagcgccttcgtagccccagcccagaaacacactccgatcctgggacacccacc
gacgctcagtccctcggctgcaccgaggagacagatcacccccccaccactcagtggcag
ctggataagtggctgaagaaagtccgaaaaaaatcctcctcctgggattccagcaaccgt
gaccacacccagagagctacagaacacagcttgccctccccaaacccccacagagccccg
tctccagccagatcctgggggaccagagaggactacagccccggccagagtcctgttccc
agcccacacttcaactacagccccaggcatagccctcggcctagccctcggcctagccct
cggcctagccctggctacagcccctgtcccagtccttgccacagcccaagacacagcccc
atccttagcccggtccccagtgtctgtctgagtccctgcctcagccccagagccaaccgt
gaccctagccccataccccgacacccccctaagagtcctagtcccagccttactcagtct
agctcccgtcactatcctcaggttcggagtcttcttcaggaaagcttcaggcctctcacg
cggcctagcttaacatccagcccgagccatagacccaaaatcaggatcgcacctgctccc
agctttgagtccaagagcaaactgaggcacagttcctctccccagcctccacttcagcac
ggctccaggcctaaacccaaacagagccaatctgttcccactcccaagattacagccaag
gcagcccctgcgctgagcactgagccaagccacagacccagacctagtcccaactccagt
cccaggcttcattctcagcctaggttgaaacacaaccccatcctagcactcaaaaccagc
caacaactaacaacctctggacaaaggcccaaggagagtagcagactcagccacaattcc
aactccaaacccaggcccaagtttgggcctagtttgacaaccagcctcagtactagtccc
agtcccacacccagggccaagaccttacctcccgcagaccctagcagagagcccagcagc
agagttggtcgcagttccaaatcgagtcccaagccacattctcggccgatctccaaatct
ggttctgggcctagctctagatccagccccagtcctatacccaaagtcaagtcccgggag
aacactgctccccacccaaagcctccacagaggaagccccaatccagggagagagaacgg
gaggtggacaaccggagagagacccaggcagcagacaggaaggcagacaggcaggcagag
ggaagggggcggggtaatgtagagagaccgggagagaggccaggagagaaacagggagag
agaagactggcagaggataagttgctaagacgcccctgggtccagagttcagaggaggaa
gaggacgtagaggagagaaagaggaggagggaggagagagagaaggaggagaagaggagg
aggaggaaggagcagcagagaggtgaatggcaggccgtccagcccaagcagagacctcac
accaacagcgagcgacaccgcaatcccattgatccacaacgccccgggactaagaaaaag
aggaggaggaagagtgaggaggaagagagagagtctcagccggacccttcccttccgccg
tcgccctcctcccccacacctgtcatcccttccacagattcctcttcttcatcatcttcc
tcatcagagtccgactcggagcccagtctgcctcccaacgtcgccaaagtcccagccgac
tccacgtccagccagcgtcccatccccaggagagggcaccagggccctgggaggccttca
gacatcaggccaggagtgctctaccccactgccacatccaaccaagaccacgggccgcag
agccaggcaaagcagaaactctacaccttggtcccgtttgggcgtagtgagcaagcccca
tcctcacaccgaggcctgaggaatctggtggtgcagttaaacctctccctgctcagcaga
gtgcctgatactacgacagacaccccagcctctcacaaacacccctcctcttcctcttcc
aagcaaaaagaggccatgagacacctgtacaccccagagacagagggaggagacagcagg
aggaaacggaagtcagagaatggaatccagcaccacagagagagtaagcggagtaactcc
aacaccaatggcccctcagcccacacagagtctacagctaacagagtgagtaagtggagt
aactcccacaccaatggcccctcagcccacacagagtctacagctaacagagagagtaag
aggagtaactcccaaaccaacggcccctcagcccacacagagtctacagctaacagagtg
agtaatcggagtaactcccaaaccaacggcccctcagcccacacagagtctacagctaac
agagagagtaagcggagtaactcccacaccaatggcccctcagcccacacagagtctaca
gctaacagagagagtaagaggagtaactcccaaaccaacggcccctcagcccacacagag
tctacagctaacagagtgagtaatcggagtaactcccaaaccaacggcccctcagcccac
acagagtctacagctaacagagagagtaagaggagtaactcccaaaccaacggcccctca
gcccacacagagtctacagctaacagagtcagtaatcggagtaactcccaaaccaacggc
tcctcagcccacacagagtctacagctaacagatgtctagacccccacacagatgccaga
cacaacaggttcttggaggactacctagacagtaagaggccactgtcccccctgtcccct
ctctctgacaccccggaccccaccaagcctcccatcaaaacacagcccccagtgcagcac
tacacaaacagtgaggtgcccaggaaccatgctaagatggaggtggagtgtgtaggtgtg
tcagggaagcccccacacatgtgtgaatcctggggacctcctttacaacgggcagggagc
cagagaggaactgtactcaaccatgaacccccacaccatgctgagtactacatgcatgag
gccaagagaatgaagcaccgtgcagatgccatggtggataagctggggaaggcagtgaac
tatgtggatgctgctctctccttcatggagtgtggcaaagctatggaggagggaccactg
gaggacaagtcaccctataccatgtacacagagacggtagagctcatcaggtatgccatg
aggctgaagaaccactctggtcctggggccagacaggaagacaaacagctggccgtactg
tgtttccggtgccttgctctcctgtactggcagatgtttcgtctgaagaaggacctagcc
atgaagtactccaaagctctactggagtactttaagagttctcccaaagtgcctactaca
ccccccatctggagcggctcaggaaagggcacaggggggcctccctcctctctctccccc
agcccctcagccctccccctgggcagctccccctcttccctcatcaacattcccctgcgt
atccaccagatggcagcaaaccacctgaacatcaccaacaatgtcctatacagctatgag
tactgggagctagcagaaagcctagtcagagacaacaatgagttctttaactacctgaat
acactttcagggccattgactctccacagtagtattgctcatgcagtccagtacaccaga
cagggtctgcagtggatacgcatcagtgccagcgtgggctag
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