Oncorhynchus tshawytscha (Chinook salmon): 112224605
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Entry
112224605 CDS
T05605
Symbol
thbs2a
Name
(RefSeq) thrombospondin-2 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112224605 (thbs2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112224605 (thbs2a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
112224605 (thbs2a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112224605 (thbs2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112224605 (thbs2a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112224605 (thbs2a)
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112224605 (thbs2a)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Opsonins
112224605 (thbs2a)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112224605 (thbs2a)
Exosomal proteins of colorectal cancer cells
112224605 (thbs2a)
Exosomal proteins of bladder cancer cells
112224605 (thbs2a)
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112224605 (thbs2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_CCN
TSP1_ADAMTS
cEGF
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
112224605
NCBI-ProteinID:
XP_024244025
LinkDB
All DBs
Position
LG25:31902063..31935726
Genome browser
AA seq
1207 aa
AA seq
DB search
MVTAALTGGFALSPGDMILRRSLNLLPILLLCSSALPQDGEVTMDDDTTFDLFDISGITR
KTLGAKQFRGQDTDNPAYRFIRFDHLPSVSAPVLKQMLLQIQNNEGFVFVASMRQDRGSR
GTLIALEGANGQRQFEIVSNGRANTLDLVYWVDGSQNVVSFEDVDLSDSQWKNITLHVHG
ENANLFVGCSLIDSFILDEPFYEHLQAEDSRMFVAKGSIRENHFRGLLQNVRFMFDTSVD
DVLRNKGCEVTKADEANVVVSESTDMEDVSTSTAITTNFIGQKTEKLGADMCERSCEELS
TMFQELKGLRVVVGNLIDGLQKVTEENTVMKDALGKMKNSKEKHMCWQDGRLFEDKEDWV
VDSCTTCTCQDSKIVCHQITCPPVACASPSFIDGECCPVCLSKDSEDGWSPWSEWTECTV
TCGTGTQQRGRSCDATSNTCSGPSIQTRKCSLGKCDSRVRQNGGWSLWSPWSSCSVTCGE
GQITRIRHCNAPTPQLGGKDCEGQGRDTQRCEAKPCPIDGGWGPWSPWAICSATCGGGVK
GRTRVCNSPEPQYGGKKCPGETNDSDACNKQECPIDGCLSNPCFGGVDCNSAPDGSWECG
PCPLGFRGNGTHCEDVNECDMVSDICFKAGGASRCINTDPGFHCLSCPPRYKGTQPFGMG
VEAAKKNKQVCEPENPCKDKTHNCHRSSECIYISHFSEPMYKCECRIGYAGDGFICGEDS
DLDGWPNQNLVCGANATYHCKKDNCPNLPNSGQEDFDKDGQGDACDQDDDNDGIVDERDN
CPLMYNPRQFDFDKDDVGDRCDNCPYEHNPAQIDTDHNGEGDACAIDIDGDEILNEQDNC
PYLYNNDQKDTDMDGVGDQCDNCPLLHNPDQADTDNDLVGDQCDNNQDIDEDGHQNNLDN
CPYVANSNQADHDKDGKGDACDFDDDNDGIPDDRDNCRLTPNKDQLDSDGDGRGDACKDD
FDNDNIPDFLDVCPENNAVSVTNFRKFQMVHLDPKGTAQIDPNWVVRHQGKELVQTVNSD
PGIAVGFDEFNAVDFSGTFYVNTDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPS
KAFGISGVSLKVVNSTTGTGENLRNALWHTGNTKNQVRTLWHDPKNIGWKDYTAYRWHLI
HRPKTGFIRVVVYEGKQILADSGPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDKLEF
PTVLSIR
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggtaactgccgctctaacagggggatttgcactttcaccaggagatatgatactcagg
agaagtctcaacttgctgcctattttattactttgctcctcagcgctacctcaagatggt
gaggtcacaatggatgacgacacaacgtttgacctgtttgatattagcggcatcacacgc
aagactctgggcgccaagcaattccgtggccaagacacggacaaccccgcttaccgcttc
atccgcttcgatcatttgccctctgtgagcgcgcccgtgctcaaacagatgcttctgcaa
atccagaacaacgagggcttcgtgttcgtggccagcatgcgccaggaccgcggctcgcgg
ggaaccctcatcgcattggaaggcgccaacggccaacggcagtttgaaatcgtctccaac
ggtcgtgccaacacgctggaccttgtctactgggtggacggctctcaaaatgttgtctcc
ttcgaggatgttgacctgtctgactcgcagtggaagaatatcacacttcatgttcatggc
gaaaatgcaaatctgtttgtgggctgcagtctcatcgacagcttcatcttggatgagcct
ttctacgagcacctgcaggcagaggatagccgaatgttcgtcgccaagggatccatccgc
gaaaaccatttcaggggcttactgcagaatgttcgcttcatgttcgacacatccgtggat
gatgttctgaggaacaaaggctgtgaagtcactaaggctgacgaggccaacgtggtggtg
agtgagagcacagatatggaggatgtgagtacctccacagccatcaccactaacttcatc
ggccaaaagacagagaagctgggagcagatatgtgtgaacgatcctgtgaggaactcagc
accatgttccaggagctcaaaggactgcgggttgtagtggggaacctcatagacggcctg
cagaaagtgacagaggagaacacagtaatgaaggatgctttggggaagatgaagaactcc
aaggaaaaacacatgtgttggcaggacggacggctgtttgaagataaggaggactgggtg
gtggacagctgcaccacgtgtacctgtcaggactcaaagatcgtgtgtcaccaaatcact
tgtcctcctgtggcctgtgctagcccctccttcatcgacggagagtgttgccctgtgtgt
ctgtctaaggacagtgaggacggctggtccccctggtcggagtggacagagtgtactgtc
acctgtgggacaggtactcaacagaggggacgctcatgtgatgccaccagtaacacgtgc
tccggaccatccatccagaccaggaaatgcagcctgggaaaatgtgacagccgagttcgt
cagaacggtgggtggagcctgtggtctccctggtcatcatgctcagtgacgtgtggcgag
ggccagatcaccaggatacgccactgcaacgcacccacaccacaactggggggcaaggac
tgtgagggccaggggagagatacacagcgctgtgaggccaagccctgtcccattgacggt
ggttggggaccatggtcgccatgggcgatctgctcagcaacctgtgggggtggagttaag
ggtcggacccgtgtctgtaacagccccgaaccccagtacggaggcaagaagtgccctggg
gagaccaacgacagtgatgcctgcaacaaacaagaatgccctatcgacggttgtctgtct
aacccatgcttcggaggagtggactgtaacagtgcccccgacggatcctgggagtgtggg
ccatgccctctcggtttccgcggcaacggaacccactgcgaagacgtcaacgagtgtgac
atggtgtctgacatatgctttaaagctggtggagcatcgcgttgcatcaacacagaccca
gggttccactgtctgtcctgcccaccccgctacaagggaacgcagcccttcggcatgggg
gtggaagctgccaagaagaacaaacaggtctgcgagccagagaacccctgcaaagacaag
acccacaactgtcaccggtcctcagagtgtatctacatcagccactttagtgaacccatg
tacaagtgtgagtgcaggatcggctacgctggtgatggtttcatctgtggagaggactca
gacctggatggatggcctaatcagaacttggtgtgtggggccaacgccacctatcactgc
aaaaaggataactgccccaacctgcctaactctggacaggaagattttgacaaagatggt
cagggagacgcgtgtgaccaggatgatgacaacgatggaatcgtggatgaaagagacaac
tgtcctctaatgtacaatcccagacagtttgactttgataaggatgatgtgggggatcgt
tgtgacaactgcccctatgaacacaaccctgcccagatcgacaccgaccacaatggggaa
ggtgacgcctgtgctatcgacattgatggagatgaaatcctaaacgagcaagacaactgc
ccgtacttgtacaacaatgaccagaaggacactgacatggatggagtcggtgaccagtgt
gacaactgtcctctgctacacaaccctgaccaggctgacacagacaatgaccttgtagga
gaccagtgtgacaacaaccaggatatcgatgaagacggtcaccagaataacctggacaac
tgtccttacgtcgccaactccaaccaggctgaccacgataaggacggcaagggggacgcc
tgtgacttcgacgatgacaatgacggtatccctgacgatagggacaactgtagattgaca
cccaataaggatcaactggactctgatggcgacggtagaggcgacgcttgcaaagacgac
tttgacaacgacaacatcccggacttccttgacgtgtgtcctgagaacaatgccgtcagc
gtcacaaacttccggaagtttcagatggtgcacctggaccccaagggaacagcgcagatc
gaccccaactgggtggttagacatcagggcaaggagctggtacagaccgtcaactctgac
cctggcatcgctgttggctttgatgagttcaacgcggtggacttcagtggtacgttctac
gtgaacacggaccgggatgacgactacgctggtttcgtgttcggctaccagtcgagcggc
cgcttctacgtggtgatgtggaagcagatcactcagacctactgggaagacaaaccctcc
aaggcctttggtatctctggtgtctctctcaaggtggtcaactcaactacgggcacaggg
gagaacctgagaaatgccctgtggcacacaggcaacactaaaaatcaggtgcgcactctg
tggcacgacccaaagaacattggctggaaggattacacagcctacaggtggcacctcatc
cacagacccaagactggattcatcagggttgtggtctatgaagggaaacagatcttggca
gactcgggaccagtgtacgacaagacgtttgctggaggacggttaggcctgtttgtcttc
tcccaggaactggtcttcttctctgatctcaaatatgagtgtagagataagctggagttt
ccaactgtgttgtccatcagataa
DBGET
integrated database retrieval system
