Oncorhynchus tshawytscha (Chinook salmon): 112224612
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Entry
112224612 CDS
T05605
Name
(RefSeq) homeobox protein Nkx-2.5-like isoform X1
KO
K09343
homeobox protein Nkx-2.3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112224612
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
112224612
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
HTH_NDX
RapZ-like_N
Motif
Other DBs
NCBI-GeneID:
112224612
NCBI-ProteinID:
XP_024244035
UniProt:
A0A8C8I0Z5
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Position
LG25:complement(32863421..32866301)
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AA seq
335 aa
AA seq
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MIIMLPSPVISASTTPFSVKDILKLELQQHAQQQRLASHLGPHHERSHLGPQQHQYTLQS
PPSCMLAGRDRNSPSPGLSEEEERMAYLNSLTVQERLMETGLAGEIFISADTSLEVEQEN
IDTKACGAMEVRACEESPQAHSDLERLPKQQRTRRKPRVLFSQAQVFELERRFKQQRYLS
APEREHLANTLKLTSTQVKIWFQNRRYKCKRQRQDKTLEMAGHPHHLPPPRRVAVPVLVR
DGKPCLAGSQNYNTSYSVGAASPYSYNGYPAYSYNNPVYTNTYSCTYSSLPTLAPNSTAN
AFMNMGLANLGASQSQAQTPQGTACQGTLQGIRAW
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgataataatgcttcctagccctgttatttctgcctccaccacgccgttctcagtcaag
gacatactgaagttggagcttcagcagcatgctcaacaacagcggcttgcctcacacctt
gggccgcaccatgagcgctctcacctgggtccacagcagcaccaatacaccctccagtcg
cccccgtcttgtatgctggccggcagggacaggaacagccccagccccgggctctcggaa
gaagaggagagaatggcctacctgaatagtctgacggttcaggagcggctgatggagacg
ggtctagccggggagatattcatttcagccgacaccagtctggaggttgaacaagagaac
atagacaccaaagcttgtggcgcaatggaggtgagggcctgtgaggagtccccgcaggcg
cactcagacttggagagactcccaaaacagcagaggacccggcggaaaccgcgcgtgctc
ttctcccaagcgcaggtgttcgagcttgagcggcgcttcaagcagcagcgttacctatcc
gcccccgagagggaacacctggcgaacactttgaaactgacctccacacaggtcaaaatc
tggttccagaacaggaggtataagtgtaaacggcagcggcaggacaagaccctagaaatg
gccggacaccctcaccatcttcccccacctaggagagtggcagtcccggtgctggtgcgg
gatgggaagccctgcctggctggatctcagaactataatacatcctacagtgttggagcg
gccagcccctatagttataacggctatccggcttattcctacaataatccagtgtatact
aacacatactcatgcacgtactctagcctgcctactctagcacccaactctactgctaac
gcttttatgaatatgggtctggcgaacctgggcgcgtcgcaatctcaggcccaaacaccg
cagggaacagcctgccaaggaactctgcagggcattcgggcctggtag
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integrated database retrieval system
