Oncorhynchus tshawytscha (Chinook salmon): 112224669
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Entry
112224669 CDS
T05605
Name
(RefSeq) RUN and FYVE domain-containing protein 2 isoform X1
KO
K12482
RUN and FYVE domain-containing protein 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112224669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112224669
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
112224669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
FYVE
Trimer_CC
PPP1R21_C
YabA
Bap31_Bap29_C
zf-RING_5
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
112224669
NCBI-ProteinID:
XP_024244130
LinkDB
All DBs
Position
LG25:35676050..35693315
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AA seq
700 aa
AA seq
DB search
MATPAEHDLTLAEAESNKEKSQVFGILRFQEEKSTGEKASTTTSTTMRAGDGRWQAPIFA
LARKASETFSGSSSHVLAKVAEPTSFVNEWSAQALRDPMAMERANLLNMAKLSIKGLIES
ALSFGRTLDSDYPPLQQFFVVMEHCLKHGLRVKKSFLGYNKSLWGPLEMVEKLCPEAGEI
AASVRDLPGLKTPLGRARAWLRLALMQKRLADYLRLLITRKDLLSDFYENSAVMVEEEGA
VIVGLLVGLNVIDANLCVKGEDLDTQVGVIDFSMYLKNDIDDYRSEERNGQIAAILDQKN
YVEELNRQLNSSVHGLQGRVDNLEKSNSKLIEELAIAKNNIIKLQEENHQLRNENTIILM
KAQQQLEVTQVDVDVELDTYKKSRQGLDEMYNEARKQLREECQLRQDVENELVVQVSMKQ
EMDLAMKLLEKDIHEKQDTLIGLRHQLDEVKAINVEMYSKMQTSDDGMKQKNDMITRLEE
KTNQITATMKQLEQRLQEVDRDRWTAEDGTRKFKQDFVNKADSLQKQIAQREKQRLQLET
DLKIEKEWQQTLQNNLERERDIVAQLSAEAQQINGLKKEFHRLQDENSQLTGICDEQEQA
LEELGCKLSESKLKIEDIKEANKALQGGQIWLKDKDANICKLCEKEFSISRRKHHCRNCG
EIFCNACSDNELPLPASPKPVRVCDTCHALLLQRCSSNAT
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacctgcagagcacgaccttacattagctgaagcagagagcaacaaagagaag
tctcaagtattcggaatccttaggtttcaggaagaaaaatcgaccggtgaaaaagctagc
accaccacgtccacgaccatgagagccggggacgggagatggcaggcacccatatttgca
ctagccaggaaagcatcagagaccttttcaggaagcagcagtcatgttttggcgaaggta
gcggaacccacatcttttgtaaacgaatggagtgcccaagctctgcgggaccctatggca
atggagagagccaacctgctgaacatggccaagctcagcatcaaaggcctgatcgagtcg
gccctcagttttggacgcaccctggactccgactaccctccactccagcagttcttcgtt
gtcatggagcactgcctcaaacatggtctcagagtgaagaagtcatttcttggatacaac
aagtctctgtggggtcctctggagatggtggagaagttgtgtcccgaggcaggagagatc
gcagccagcgtcagggacctaccaggactaaagactccgctgggcagagctcgggcctgg
ctgcgtctagccctgatgcagaagaggctggctgattacctccgccttctgatcaccaga
aaggacctgctaagtgatttctatgagaattctgctgtgatggtagaggaggagggtgct
gtcatcgttggcctgctggtgggactcaatgtgatcgatgccaacctttgtgtcaaggga
gaagacttggatacacaggttggggtcattgacttctccatgtacttgaaaaatgatatt
gatgactacagaagtgaagaaagaaatggtcaaatagcagccatcctggaccagaagaac
tacgttgaagaattaaacaggcagcttaactcttcagtacacggcttacaagggagggtc
gataacttggagaaatcaaactctaaactcattgaggagctggcgattgcaaaaaacaac
ataatcaaactacaagaggagaatcatcagcttagaaatgagaacactattattctcatg
aaagctcagcagcaacttgaggtgacccaggtggacgtggacgtggagctggacacctac
aagaagtcgaggcagggcctggacgagatgtacaacgaggccaggaagcagctcagggag
gagtgtcaactacgccaggatgtggagaatgagttggtggtgcaggtgagcatgaagcag
gaaatggatctggccatgaaactgttggagaaggacatccacgaaaagcaggacacactg
atcggcctccgccaccagctggacgaagtcaaggccatcaacgtggaaatgtactcaaaa
atgcagacttccgatgacggcatgaaacagaagaacgacatgatcactcgtttggaggag
aagaccaatcaaatcacagcaaccatgaaacagctggaacaaagattacaggaggttgat
cgggaccgctggaccgcagaagatggaacgcgcaaattcaagcaggactttgtcaacaaa
gccgacagcctccaaaagcagatagcccagagagagaagcagaggttgcagctggagaca
gacctaaagattgagaaggagtggcagcagaccttacaaaacaacctggagagggaacga
gacattgtcgcccagctcagtgctgaagcccagcaaataaatggacttaaaaaggagttc
cacaggctgcaggatgagaacagccagctgactggaatatgtgacgaacaggaacaggcc
ctggaggagctgggatgcaaacttagcgaatcaaaacttaaaatcgaggacataaaagag
gcaaataaagctcttcaggggggccagatctggctgaaggacaaagacgccaacatctgt
aaactgtgcgagaaggagttctccatctctcggagaaagcaccactgtagaaactgtggg
gagatcttctgcaatgcctgctctgacaacgagctgcccctccctgcctcgccaaaacca
gtgagggtctgtgatacgtgccacgcccttcttctccaacgctgttcctcaaatgccaca
tga
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