Oncorhynchus tshawytscha (Chinook salmon): 112224722
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Entry
112224722 CDS
T05605
Name
(RefSeq) AT-rich interactive domain-containing protein 4B isoform X1
KO
K19195
AT-rich interactive domain-containing protein 4B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112224722
03036 Chromosome and associated proteins [BR:
otw03036
]
112224722
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
ARID
112224722
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
112224722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Tudor-knot
Motif
Other DBs
NCBI-GeneID:
112224722
NCBI-ProteinID:
XP_042161621
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All DBs
Position
LG24:complement(32386331..32497977)
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AA seq
1300 aa
AA seq
DB search
MDTDSPPKADAGLKQVLDAAVEFVHQAVVPGSWRTEVKDESSTSEEDEEEEEQEEEASEE
EDEEEVEPFPEERDNFLQQLYKFMEDRGTPINKKPVLGYRNLDLFKLYRLVHQLGGFHDI
ESGSVWKTVYQALGIPVLNSAAGYNVKCAYRKYLYGFEEYCTSCAITFRMDLPLKQPKAE
GGKAEGETGEAGGDSSVPPVASSSSAEEQKRKACYSERENLCCSETSSTQPIVCKEDTEL
TRNRPELEPLKAEQQKAEREGGDDDDDGVDDEEGNDHHKHGSDDEDGPSFARLREEGVKL
EPYDEEQEAGKAEDISGSGDESCSQEGDGGDEDLGEEGEEFECYPPGMKVQVRYGRGRSL
KTYQATVKEADVEGGEVLYLVHYCGWNVRYDEWVKADKIVRPANKNVQKIKHRKKIKNKA
ERERNRLEQLNEDLGSPSPNRLRVPRPSSKSLGPCSAHERHVFSKMEDASESSTDESDQD
GGREDDDDHPGSGGRGSLRKGGPPKPLHALDRWEGTASTDVPKPPLVTGKSQQPISVETP
EAGRRRSQLEFEAEREGPGSSACRKRKSEGVAGEQQTSKGPPSKTKLPTRSTRSADWLPG
GSNRRAQERAGGLGEDRGGAGGSSSSSSDDGGAPPTEPHQADGDRPSSRPKPSPSKKYNG
MKDKSGTGGGGGARPAGFWEIPEKRAKMASSSVEERERERARPAGGSRTKGQKDVWSSIQ
AQWPKKTLKELFSDSDTEAANSPPPPGPAQSSSSCHEERESRGERDGNEAGLGGPERESR
GERDGEGDEAGGRGPEREIRGEQGGEGDEGGGGPEREDHDLSEENQGQEKRRSEQEFPSS
GSDSVLNTPPTTPESPSMGHSSSGAMAQGAGTGSNRTQPSCPPLSVTPALGTTPSSDPLA
PGRPNTLAEEGGCGRSETDSSTVEVESLGGELQDQDLPPDQEQGEPHHHGGAGSPSSQSK
VSLLDGPGSLSSSHSHSNSTCSLELSSSSRHDNTEHKAKVSASHKRQKEQQAGGAAKKPK
PNRKSSVPPKKNNNRKTAHSSDSEDQSLGESTAKSSVSKTHGAADMKGSISPKCPGLGQG
RTPPSSQKYHKQHGDPDHHHHLHNREHHREREHHHPRHREHHREHHREHHREHHREHPHH
REHHREHHREHHKEHPRHREHHIEHPHHREHHIEHPHHREHHKEHPHHREHHREHPHHRE
HHKEHPHHREHHREHPHHREHHREHPYHREYHKEHPHHREYHREHPHHREYHREHLHHRE
QPYHREYHKEHPHHRDHSYHRDHHIVSTEIVHHELCDLAS
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggacacagactctccacctaaagctgacgcagggctcaagcaagtgctggatgcggct
gtggagtttgtgcatcaggcggtggtgcccggctcctggaggactgaggtgaaagacgag
agttccacaagtgaggaagatgaggaggaggaagagcaggaggaagaggccagtgaagag
gaggatgaggaggaagtggagccgttccccgaggagagagacaatttcctgcagcagctg
tacaagttcatggaggacagaggaacccccatcaacaagaagcccgtgctgggctacagg
aacctggacctctttaagctctacagactggtgcaccaactgggaggcttccatgatatt
gagagtggatccgtatggaagactgtctaccaggctctgggaatccctgttctcaactct
gccgccggctacaatgtcaaatgtgcttaccgcaagtacctgtatgggtttgaggagtac
tgtacctcctgcgccatcactttccgcatggaccttccactgaagcagcccaaggcagag
gggggcaaggctgagggggagacgggggaggcagggggagacagttctgtcccacctgta
gcctcttcaagctcagcagaggagcagaaacggaaagcctgctactctgagagagagaac
ctgtgctgctcagagaccagcagcactcagcccatcgtctgcaaggaggatactgagctc
acccggaacagaccagagctggaacctctgaaggctgagcagcagaaggctgagagagaa
ggtggtgatgatgatgatgatggtgttgatgatgaggaaggaaacgaccatcacaagcac
ggctctgatgatgaagacggcccttcatttgctcgcctcagagaggagggagtgaagctg
gagccttacgatgaggagcaggaggctgggaaggcggaggacatttctggctctggggat
gagagctgcagtcaggagggcgatggtggtgatgaggatctgggggaggaaggggaggag
tttgagtgttaccccccggggatgaaggtgcaggtgaggtatggtcgtggtcgcagcctg
aagacgtaccaggccactgtgaaagaggctgacgtggaggggggagaggtgctctacctg
gttcactactgtggctggaacgtcagatatgatgagtgggtcaaagctgacaagattgtc
cgtccggccaataagaatgttcagaagatcaagcaccgtaagaaaataaagaacaaagcg
gagagagagcgcaaccgcctggagcaactgaacgaggacctggggagtccgtccccgaac
agactacgtgtcccccgcccctcctccaaatccctcggcccctgctctgcccatgagcgc
catgtcttctccaagatggaggacgcctcagagagttcaacagacgagtctgatcaggat
ggtgggcgtgaggacgacgatgaccatccaggttcagggggtcgcggcagtctcagaaag
gggggtccccccaaaccccttcacgccttagaccgctgggagggtaccgcctctaccgat
gtccccaaaccaccattggtcacagggaagagccaacaaccaatcagcgtcgagaccccg
gaggctgggaggcggcgtagccaactagagtttgaggctgagagggaggggccaggtagc
tccgcctgcaggaagaggaagtcagaaggagtggcaggggagcaacagacctctaaagga
cccccctccaaaaccaagctcccaaccaggagcaccaggagcgcagactggctgccggga
ggctccaacaggagggcccaggagagagcaggaggtctaggggaagacagaggaggagca
ggaggttcctctagcagcagctcagatgatggaggtgcacctcccactgagccccaccaa
gccgatggagaccgacccagctcccgtcccaaaccttccccctctaagaagtacaacggc
atgaaggacaagagtggcaccgggggtggaggcggcgcccgccctgcgggattctgggag
atccctgagaagagggctaagatggcatccagcagcgtggaggagagggagagagagaga
gcgagaccggcgggtggcagtcgtaccaagggccagaaggatgtgtggtccagtattcag
gcccagtggcccaagaagaccctgaaggagctgttctctgactccgacacagaggctgct
aactcccctcctccgcctggaccggcccagtcctcatcatcatgccacgaggagagggag
agcaggggggagcgggatgggaacgaggcaggacttggaggcccggagagggaaagcagg
ggggagcgggacggggagggagatgaggcaggaggaagaggcccggagagggagattagg
ggggagcagggcggggagggagacgagggaggaggaggcccggagagggaggaccatgac
ctctcagaggagaaccaggggcaggagaagaggaggagtgagcaggagttcccctccagt
ggatctgactcagttctcaacacccctcccaccaccccagagtccccatccatgggacat
agcagtagtggggccatggcgcaaggggctggaactggctctaaccggactcagccctcc
tgtcctcccctgtctgtaacccctgctctgggtacaacgccctcctctgaccccttggct
ccggggcgccccaacaccctggcagaggaaggtggttgtggtcgcagtgagacagacagc
agtacagtggaggtggaaagtctaggaggggagctgcaggaccaggacttacccccagac
caggagcagggagagccccaccaccatgggggagcaggatccccctcctcgcagagtaaa
gtctccctcctagacggtccaggtagcctgtcctcctctcacagccactccaactctacc
tgcagtctggagctcagtagtagcagtcgacacgacaacactgaacacaaagccaaagtg
tctgccagtcacaagcgtcagaaggaacagcaggcaggtggagcagcaaagaaacccaag
ccaaacagaaagagctcagtgcctcccaagaagaacaataacagaaaaactgcccacagc
agtgacagtgaagaccagtcattgggcgagagcacagccaagtcttcagtctccaagacc
catggtgcagcagacatgaaggggtccatctcgcccaagtgtcccggcctgggacaggga
cgcacccctccatccagccagaagtaccacaagcagcatggtgaccctgaccaccatcac
catcttcacaatcgggaacatcaccgggagcgtgagcaccatcaccctcgccacagagag
caccatagagagcaccacagagagcaccatagagagcaccatagagagcaccctcaccat
agagagcaccacagagagcaccatagagagcaccataaagagcaccctcgccacagagag
caccatattgagcaccctcaccatagagagcaccatattgagcaccctcaccacagagag
caccataaagagcaccctcaccacagagagcaccatagagagcaccctcaccacagagag
caccataaagagcaccctcaccacagagagcaccatagagagcaccctcaccatagagag
caccatagagagcacccttaccatagagagtaccataaagagcaccctcaccatagagag
taccatagagagcaccctcaccatagagagtaccatagagagcaccttcaccatagagag
caaccttaccatagagagtaccataaagagcaccctcaccatagagatcactcttaccat
agagatcaccatatagtttcaactgaaattgttcaccatgaactgtgcgatctcgctagc
tag
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