Oncorhynchus tshawytscha (Chinook salmon): 112224802
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Entry
112224802 CDS
T05605
Symbol
sdk2b
Name
(RefSeq) protein sidekick-2 isoform X1
KO
K16353
protein sidekick
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112224802 (sdk2b)
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Other
112224802 (sdk2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
V-set
Ig_RIMBP2
DUF1686
Motif
Other DBs
NCBI-GeneID:
112224802
NCBI-ProteinID:
XP_042162091
LinkDB
All DBs
Position
LG25:24499970..24974264
Genome browser
AA seq
2262 aa
AA seq
DB search
MAGVSPGLKWRASWILLFSLFIHYTTAQDDVPPYFKTEPVRSQLHLERNRLVLTCMAEGS
WPLEFKWIHNGTELTRFSLEYRYLIPSLDRSHAGFYRCIVRNRVGALLQRRTEVQVAFMG
SFEEGERAQSVSQGEGAVVPAPRIRSFPQPQVTWFRDGRKIPPSSRIAITLDNTLVILST
VAPDAGRYYVQAVNDKNGENKTSQPITLSVDNVGGPADPIAPTIIIPPRNTSVVSGTSEV
TMECVANARPLIKLSITWRKNRVLVTSGLSDFNRRLTIISPVVSDSGFYECEVVLRSSSV
PSVNAGAYLHIQEPPQFVKEPEKHITAEMEKVVDIPCQARGVPQPDIVWYKDAVPISPVK
TPRYRVLVGGSLQVNGLLPDDTGMFQCFARNLAGEVQTNTYLAVTSIAPNITAGPSDSTV
IDGMSIILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHLSDAGTY
TCMASNSRGIDEAAADLLVWARTRINTPPQDQSVIKGTKATMTCGVTHDPSVTVRYVWEK
EGSVINAQSIPRIRLDSDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPYAP
ENPVSLLSSSEKRAINLTWAKPFDGNSPLIHYVLEVSENNAPWAILLANIEPESTAVTVS
GLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAPPQNVIASGRTNQSIMIQWQP
PPESHQNGILRGYSVRYRLTGLPVDYQSKNISKPDVTNLLLEDLIIWTNYEIEVAAYNWA
GLGTFSHKVTEWTLQGVPTIAPSNVQAEAVNSTTIRITWAAPNPQFINGINQGYKLLAWE
PGQEEEVTMVTVRPNFQDSVHVGYVTGLKKFREYYTSVLCFTTPGDGPRSPAKGLRTHED
TPGAVGHLSFTEILDTSLKVSWREPGEKNGVLTGYRISWEEFNRTNTRVTHYLPNVTLEY
RVTGLTALTTYTIEVAGMTSKGQGQLSSSTISSGVPPELPGPPTNMAISNIGPRSITLQF
KPGYDGKTSISRWQVEAQVSVIGDNEDWVIVHQLPNEPDARSMEVPGLNPYTFYRFRMRQ
VNIVGTSPPSQPSRKIQTLQAPPDMSPANVTLRTASETSLWLRWVPLPEWEYNGNPDLLG
YRLQYSRTGSQGKALTHVIADRLEREFTIEDLEEWTEYEVRVQALNGIGAGPWSQPVRGR
TRESVPSCGPTNMSAFATTSSSILVRWFEVPEQDRNGLILGYKVLYKEKDSDSSLQLWTI
EGNASHSVQLTGLGKYVLYEIQVLAFTRIGDGMPSSPLILERTLDDVPGPPVGILFPEVR
TTSLRLIWQSPSQPNGIILAYQITYRLNSSNSNTATVDVLNPSARQYMVTGLKKDSMYVF
RITAQTRKGWGEASEALVVTTEKRARPQPTNRPMVPQKDVQARSVLLSWEPGSDGLSPVR
YYTVQLRELPDSNWTIHSASVTHEASSYIVGRLKPFTSYQFRVKATNDIGDSEYSEESEA
ITTLQDAPDEAPTILSVTPHTTTSVLIRWQPPSEEKINGILLGFRIRYRELLYDRLRSFS
VLTANSPSATWAELTSPYSVRNLSESSLTQYELDNLSKHKRYEIRMSVYNVMGEGPTSTP
QEVFVGEAVPTAPPQNVAIQTATATQLDVTWESPPLDTQNGDIQGYKVYFWELQRKNETE
RLRTLFLPEGGVKLKNLTGYTTYMISVAPFNAAGDGPRSPPTRGRTQQAAPSAPSFIHFS
ELTTTSVNVSWGEPTYPNGILEGYRLVYEPCTPVDESTVACADCLHSPSPPGVSKIVTVD
VKGAPFWMKIKDLADGVTYNFRIRAKTFTYGPEVEANITMGPGEGAPGPPGEPFISRYGS
ALTIHWANGDPGRSPITRYVIEARPSDEGLWDILIKDIPKEVTSYTFNMDILKQGVSYDF
RVIGVNDYGYGSPSPPSASISAKKVAPFYEEWWFLVVVALVGLIFILLLVFILIIRGQSK
KYAKKSESVSPYVCSSGNNSNCNALTHGDMVSLDEGRFPALELNNRRLSVKNSFCRKNGV
YTRSPPRPSPGSLNYSDEDLSTTKYNDLIPAETSSLTEKPSEISDSQVPTEALVFSYGTG
GLRVLPLNWGSDSEYEVDQNRQKTHSFVSHYISDPTYYNSWRRQQKGISRAQAYSYTESE
SGDPEPCAPPPPLPPLPPQLTSTTPPLKLQTQGQAQGQPQGLPPQGQGSLFRPKGSRTPT
PSQQLSTSTPSSHSNTLSYWPPSSPSPAPGSRAPIAGFSSFV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtttcgcctggactgaagtggcgcgcctcatggattttattgttttccctg
tttatccactacacaacagctcaagatgatgtgccgccctactttaagacggagccggtg
cggagccagttgcacctggagcgtaacaggctggtgttgacatgtatggcggaggggagc
tggcccctggagttcaaatggatccataatggcactgagctcacacggttctcattggag
tacaggtacctgattccctccctggaccgttcccatgctggcttctaccgatgtatcgtc
aggaaccgtgtaggagccttactacagaggaggactgaagtacaggtggcattcatgggc
agttttgaagagggtgagcgtgcccagtcggtctctcagggggagggggcggttgttccc
gctccacgcatcaggagctttccccagccgcaggtcacatggttcagagacggacgcaag
attccgcccagcagccgcatagccattaccctggacaacactctggtcatcctgtccacc
gttgcccctgatgctggacgctactatgtacaggcggtcaacgacaagaacggggaaaac
aagaccagccaacccatcaccctgtctgttgacaatgtgggtggtcctgcagaccctatc
gcccccaccataatcatcccccccaggaacaccagtgtagtgtcaggcacgtctgaagtc
accatggagtgtgtcgccaacgccagacccctgatcaaactcagcatcacatggaggaag
aacagggttcttgtcaccagtggtctgagtgacttcaaccgcagactgaccattatcagc
cctgtggtcagtgactcagggttctatgagtgtgaggtggtcctccgcagcagcagtgtg
ccttctgtcaacgctggggcctacctacatattcaagagcctccccagtttgtgaaggaa
ccagagaaacacattactgccgagatggagaaagtggtggatatcccctgccaggcacga
ggtgtgcctcagccagacattgtgtggtataaggatgcggtgcccatcagtccggtgaag
accccgaggtacagggtgttggtgggaggcagtctgcaggtcaacggccttctgcccgat
gacacaggaatgttccagtgtttcgcccggaacctagctggagaggtgcagaccaacacc
tacctggctgtcactagcatcgcccctaacatcacagccgggccatccgacagtacagtg
attgatggcatgtcaatcatcctccactgtgaaacatcaggagctcccagaccggccatc
acctggcagaaaggtgagcgtgtcctggccagtggttctgtccagctgcccaggttcacc
ctgctggagtcaggcagcctgctcatctctccctcccacttatcagatgctggcacctat
acctgcatggccagcaattcccggggcatagacgaggctgctgctgacctgttggtgtgg
gctcgtacacgtatcaacactccccctcaggaccagagtgtcatcaaaggcaccaaggcc
accatgacctgtggagttacacacgaccccagtgtcaccgttaggtatgtatgggagaag
gagggctcggtcatcaacgcccagtctatcccccgtatccggctggactctgatggtacc
cttcacatctcccagacctggtcaggtgacatcgggacctacacctgcagggtcacctct
gtagggggcaacgactcacgcagcgcacacctccgagtcaggcagctgccctatgcccca
gagaaccctgtgtctctgctgagctcctcagagaagagggccatcaacctgacatgggcc
aaaccctttgacgggaacagccccctaatccactacgtcctggaggtctccgagaacaac
gctccctgggctatcctcctggccaacatagagcctgagtcgaccgcggtgacagtcagt
gggctcatcccagcacgctcctaccagttccgcctgtgtgccgtcaatgatgtgggaaag
ggacagttcagcaaggagactgaccgtgtatctctaccagaggaacctcccagtgctcct
ccccagaacgtgatcgccagcggccgcaccaaccagtccatcatgatccaatggcagccc
ccaccagagagccaccagaacgggatcctcagaggctacagcgtccggtaccgtctgaca
ggtcttccagtggactaccagagtaagaacatctccaaaccagatgtgaccaaccttctc
ctggaagatcttatcatctggaccaattatgagatcgaagtggcagcctacaactgggcg
gggctaggaaccttcagccacaaggtcactgagtggacgttgcaaggagtgccgactata
gcccccagtaatgttcaggcagaggctgtcaactccacaaccatccgtatcacctgggcc
gcccctaaccctcagttcatcaacgggatcaaccagggatacaagctgttggcatgggag
ccaggtcaggaggaggaggtcaccatggttacagtgagacctaacttccaggatagcgtg
catgtgggctacgtgacagggctaaagaagttcagagagtactacacctctgtgctttgt
tttactacgccaggggatggcccccgcagccctgctaaaggccttaggacacatgaggac
actcctggggctgtgggtcacctgagcttcacagagatcctagacacgtctctcaaagtg
agctggagagaacctggagagaagaatggagtcctcacaggctaccgtatctcgtgggag
gagtttaaccgcaccaacacacgggtgacccactacctccccaacgtgaccctggagtac
cgcgtcacagggctgactgccctcaccacctacaccatcgaggtggccggcatgacctcc
aagggtcagggacaactgtcctcctccaccatctcttctggagtacctccagagctgcct
ggtcctcccaccaacatggccatctccaacatcggccctcgatccatcaccctccagttc
aaacctggctatgatggaaagacctccatctctcgctggcaggtagaggcccaggtcagt
gtgataggagacaatgaagactgggtgattgttcaccagctgcccaacgagcctgatgcc
cgctccatggaggtgccaggactcaacccatacactttctacaggttccgtatgcgtcag
gtaaacattgtggggaccagtcctccaagtcagccctccagaaagatccagaccttgcag
gcccctccagacatgtcccccgcaaacgtcaccctgcgcacggccagcgagaccagtctg
tggcttcgatgggtgcccctaccagagtgggagtacaatgggaacccagatctgttgggt
taccggctccagtactcccgtacaggctcccagggtaaggcactgacccatgtgatagct
gaccggctggagagggagttcactatcgaggacctggaggagtggacagagtatgaggtc
agggttcaggctctcaacggcatcggggccgggccctggagccagccagtcagagggagg
accagggagtctgtcccctcctgtggccctaccaacatgtcagccttcgccaccacctcc
agcagtatcctggtgcgctggtttgaagtaccagaacaagaccggaatggacttatcttg
ggctacaaggtgttgtataaggagaaggactccgactcgtccctccagttgtggacaata
gaggggaacgccagccacagtgtccagctgactggtctggggaaatacgtcctttatgag
atccaggtcctggccttcacccgcatcggagacggcatgcccagctcaccactcatactg
gagaggaccctggacgacgtgcccggccctccagtgggcatcctgttccctgaggtccgg
accacctcgttgcgtctcatctggcagtccccgtctcagccaaacggcattatcctggcc
tatcagatcacgtatcgtttgaactcgagcaacagcaacacggccacagtggacgtgctg
aacccgagtgctcgtcagtacatggtgacgggcctgaaaaaagattccatgtatgtgttc
cgcatcacagcccagacacgcaagggctggggagaggcctcagaggcactggtggtcacc
accgagaagagagctcgcccccagcccaccaatcgtcccatggtgccccagaaggatgtt
caggcccgcagtgtgttgttgtcatgggaaccaggcagcgatggcctctctccggtccgc
tactacaccgtgcagctgagagaactgcccgacagcaactggactatccactctgcctcg
gtcacccacgaggccagctcctacatagttggcaggctgaagcccttcacctcctaccag
tttcgagtgaaagccaccaatgacataggagacagtgaatacagcgaggagagtgaagct
atcacgacactacaggacgccccggacgaagcccccacaatcctctctgtcacgccacac
acaactacatccgtgctgattcgctggcagcctccgtctgaggagaagattaacggtatc
ctcctgggcttccggatacggtaccgggagctcctgtacgaccgtcttcgcagtttctcc
gtactcactgccaacagcccctctgctacctgggccgagctcacctccccctacagcgtg
cgaaacctgagcgagtcctctctcacccagtatgagctggataacctgagcaaacacaag
cgctatgagatcaggatgagtgtttataatgtcatgggggagggaccaactagcacccca
caggaagtgtttgtaggagaggcagtacccactgccccacctcagaacgtggccatccaa
acagcaacggccacccagctggatgtgacgtgggagtctcctccattggacactcagaac
ggagacatccagggctacaaggtgtacttctgggagctccagcgtaagaacgagacagaa
aggctgcggaccctgttcttgccagagggaggggtcaagctgaagaacctgactggatac
accacctacatgataagtgtggcccccttcaacgcagctggggacgggccccggagcccc
ccgaccaggggccgcacacagcaggctgcccccagcgctcccagcttcatccacttcagt
gagctgaccactacttcagtcaacgtgtcctggggtgagcccacctaccccaacggcatc
ctggagggctaccggctggtctacgagccctgcacccctgtggacgagtctaccgtggcc
tgtgccgactgtcttcactccccctcccccccaggcgtcagtaagatagtgacggtggac
gtcaaaggggccccgttctggatgaagatcaaggatctggctgacggggtgacctacaat
ttcaggatccgggccaagacgttcacctatgggcctgaggtggaggctaacatcaccatg
gggcctggggaaggagcccccggcccccctggagagcccttcatctctcgctacggctca
gctctgaccatccactgggctaacggtgaccccgggaggtcgcctatcacacgctacgtc
atcgaggccagaccctcagatgaaggcttgtgggatatcttgatcaaggacatcccaaag
gaagtgacgtcatacaccttcaacatggacattctgaagcaaggggttagttatgacttc
cgggtcattggagtgaacgactacggctacggatctcctagtccaccctcagcctccata
tctgccaaaaaggtggcgccgttctatgaggagtggtggttccttgtggtggtggctctc
gtgggactcatcttcatccttctactggtcttcatccttatcatcagaggacagagcaag
aagtacgccaagaagtctgaatcagtgtctccctatgtgtgttcatcagggaacaactct
aactgtaatgccctgacccatggagatatggtcagcctggacgagggacgcttccccgcc
ctggaactcaacaaccgccggctgtccgtcaagaactctttctgccgtaagaacggcgtc
tacaccaggtctcctcctcggcccagcccaggcagtctaaactactctgatgaggatttg
agcaccaccaagtacaacgatctgatcccagctgagaccagcagcctgaccgagaaacca
tctgagatatcagactctcaggtaccaacagaggccctcgtgttctcgtatgggacgggt
ggtctgcgtgtgcttccactgaattggggcagtgacagtgagtatgaggtggaccagaac
agacagaagacccactctttcgtgagccactacatcagtgacccaacctactacaactcc
tggcgccgccaacagaaaggcatttccagggctcaagcctacagctacactgagtcagag
tcgggcgacccagagccctgcgccccgccaccaccccttcccccattgccaccccagctc
acctccaccacccctccgcttaagctccagacccagggtcaagcccagggccaaccccag
ggcctcccaccccagggccaaggtagtctcttcaggcctaaaggcagccggactcccacc
ccctctcagcagctctccacctccaccccctccagccactccaacaccctgtcctactgg
ccccccagcagccccagccccgcccctggatctcgggccccaattgccgggttctcttcc
ttcgtttga
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