Oncorhynchus tshawytscha (Chinook salmon): 112224806
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Entry
112224806 CDS
T05605
Symbol
lrpprc
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112224806 (lrpprc)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
112224806 (lrpprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_long
PPR_3
PPR_1
TPR_MalT
Unstab_antitox
Motif
Other DBs
NCBI-GeneID:
112224806
NCBI-ProteinID:
XP_042162134
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All DBs
Position
LG25:complement(28003227..28079913)
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AA seq
1455 aa
AA seq
DB search
MPFHSSHFRLNMAALLRSARLLKFSPSGFLQRTGTNRNGPQLSRLYSGAIGGKGSGVCSR
QIVPGPYSVHRCVWPYAGVRHYAMVTEQRGPHTDESSLGVRSKQAQQFDWALAKLDSSVR
RTGRITKTLLLRIFHDICRTGYPSGNQALLLLRSCGSLLPEMPLAERTELAHRIWDKLQE
LGASYDASHYNALLKVYLQNEFKFSPTEFLAKMEAAGVQPNRVTFQRLIAAYCHDGDIEG
ASTILGFMKSKDLPITEAVFNSLVTGHARAGDMESSESILQVMKGAGIEPGPDTYVALLN
AYAERGDMDKIKQTLEAVENTDTSLMDRDLMQVVFSLSKAGHQQHVPEIVERMRHERGYV
PDAMNLCLSLITQGQEDTAFTVLKTFPTLQQETQSGDSPTLGNFFLRHCVNMDKPVDKVA
RYCKELQDSSYHATPLQFTLYCCLEAKKTATAVEVMKMMKEQGQPIRPHYFWPLLTQHAK
DQNTTGIMEVLKGMQELDVPADVETMSFYVLPAFPNIDAARDAFKEMGCSLESEGFLSSE
MRSEASSGNLAGLLVMMSAPSFPALDLSTFRGSLIQGFRRSDDLESMAKITELLYKDERF
SQGATGSAEAVSYFLYNLMDSMTEAEVQAQEDKLRQYFNQLKSMGIIIPGNIYRGIRNLL
DSYHVPELIKDVIALVDSQEPLNFSDNRVVILDGKVLALESRLAELKADSKPVGATLKQL
ILTLCAEEKLDRALELKKQHEADMVAGSYAALIHLCCRHDNVEEALNLKRELSRKDSSVS
LDSSKYVALVKVLTKQGRLEEAVDMLKEMKEKEVVVRDTTVTLLFHVLNAAAMKGDVVAV
RRLQDTIFTLGLATPTANLCSPLVSAHLETKDLGGALEAAMECQKQYGQLPRIHDVICGL
VERGDTELLQKAMDFVSQERGEMTMLYDLFFAFMQTGRHREARKIIETPGLRARPGRLQW
YAEKCINGNQMESLESMVDMTAKLFECDRDELYHYVLRLCKDTNDWRKAEATWTKMQEEN
VIPRERTLRILADILKSNGQEVPFEVPEVWYEQAADREAQSETKPEGSKGKATKSASTQA
ATAENNPADYQFRLLTLCKKGKAKEAYDMLKDIERKGVTLGPAPYDSLIRALLAEGSMEN
AMVVKEIAVGRIPGFKLNDIANSLLIITQVKRGLAKDGMSTLKSMLQGDQVPSKLSVTRL
VQSLGSHGDVQGIQEVEVLMKGLGTPLNLSSMVFLNNTAMAHIKNGDLDSAVEGLEAVYT
QGDGPQGPAASMAFVFRKVLEENNGAALDKLSAMAERLANHFSSYRAASDLFLQLLEANM
VEDAKFMLARCNAVAEQKEILVSYMSRLAQKPGQVGKIKTLMTLIPDFTEKETLYPYLMK
CYGVDNDLVSAKALYQQMQTEGVEADELCLKRLAVLYRNAGETVPFTEPPETFKFYAEKL
KEKSKGSHPSTAVEE
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccattcctcgcactttaggttaaacatggctgcgctcttgagatctgcacga
cttctgaaattttcgccatcgggctttcttcaaagaacagggacgaacagaaatggaccg
cagctcagtcgactgtacagtggagcgatcggtggtaaaggctccggagtctgttcaaga
caaatcgtcccaggcccatacagtgtacacaggtgtgtgtggccctatgcaggggtacgt
cactacgccatggttacagagcagcgggggccacacactgatgagtccagtttgggtgtg
cgatctaagcaggcccagcagtttgactgggccctggcaaagcttgacagttcagtgagg
aggacggggcgcatcaccaagaccttgctgctgcgcatcttccacgacatctgccggaca
ggctaccctagtgggaaccaggccctgctcctcctgcggagctgtggctctctactgcct
gagatgcccctggcggaacgcactgagctggcccaccgaatctgggacaagctacaggag
ctgggtgcctcatacgatgccagtcattacaacgcactgctcaaggtatacctgcagaac
gagttcaagttctcccccacagagttcctggccaagatggaggcagccggcgtgcagccc
aaccgagtgacctttcagagactgattgcagcctactgccatgatggggacattgagggt
gccagtacaatcctgggtttcatgaagagcaaggacctgccaatcacagaggctgttttc
aactccttagtgacaggtcatgcacgtgcaggtgacatggagagttcagagagcatcctg
caagtcatgaagggggcaggcatcgagccgggccctgacacatatgtggcactgctcaac
gcctatgcagagaggggggatatggacaagatcaaacagactctggaggctgtggagaac
acagacaccagtctgatggacagagacctgatgcaggtggtatttagcctgtccaaggca
ggccatcagcagcacgtaccagagatagtggagcgtatgagacacgagagaggatatgtt
ccagatgctatgaacttgtgtctgagcctgatcacccagggccaggaagacacagccttc
accgtgctgaagaccttccccaccctgcagcaagagacccagagtggagactcccccacc
ctgggcaacttcttcctgcgtcactgtgtcaacatggacaagccagtggataaggtggcg
cgctactgcaaggagctgcaggactccagctaccacgctactcccctgcagttcaccctc
tactgctgcctggaggccaagaagactgctactgcagtggaggtgatgaagatgatgaag
gaacaggggcaacccatcagacctcactacttctggcccctcctcacacaacatgccaag
gaccagaacacaacagggatcatggaggtgttgaagggcatgcaggaattggatgtacca
gctgatgtagagacaatgtccttctacgttctgcctgctttcccgaacatagacgctgcc
cgggatgcattcaaggaaatgggctgctccttggagtctgagggtttcttgtcctctgag
atgcgctctgaggctagtagtgggaacctggcaggactgttggttatgatgtctgctccc
tccttccctgccctggacctgagtaccttcagaggaagtctcatccagggcttcagacgg
tctgacgatctggagagcatggccaagatcactgagctgctgtacaaagatgagcgtttc
tctcagggagctacaggatctgctgaggctgtgtcctactttctctataacctgatggac
agcatgactgaggcagaggtgcaggctcaggaggacaagctcaggcagtacttcaaccag
ctgaagagcatgggtatcatcatcccagggaacatctacagagggatcagaaacctgcta
gactcctatcacgtgcctgaactcatcaaggatgtcatcgccctggtggactcccaagaa
cctctgaacttctcagacaacagagttgttattctggatggtaaggttttggcgctggag
agcaggctggctgagctgaaggctgacagtaaaccagtaggagctaccctgaaacaactc
atcctcactctgtgtgccgaggagaaactggacagggctctggagctgaagaaacaacat
gaggcagacatggttgccggtagctacgccgccctcatccacctctgctgtcgccatgac
aatgtggaagaggcactgaacttgaaaagagagctgagccgtaaggattcctctgtgtct
ctggattccagcaagtatgtggctctagtcaaggtcctgaccaagcagggcagactggaa
gaggcggtggacatgctgaaggaaatgaaggagaaggaggtggttgtgagggacaccaca
gttaccctgctcttccatgtcctcaatgctgcggccatgaagggggacgtggtagctgtc
cgtaggctccaagacaccatcttcaccctgggcctggccactcccaccgccaacctctgc
tcccccctggtctcagcccacctggagactaaggaccttggcggggctctggaggcagct
atggagtgtcagaagcagtatggacaactcccacgtatccacgacgtcatctgtggcctg
gtggagaggggagacacggagctcctacagaaagcgatggactttgtgagccaggagcga
ggcgagatgacaatgctgtacgacctctttttcgccttcatgcagactggccgccaccgg
gaggcccgcaaaatcattgagactccaggtttaagggctagaccaggacgcctgcagtgg
tacgctgagaagtgcatcaacggcaaccagatggagtcgttggagagcatggtggatatg
acagccaagctgtttgaatgtgaccgcgatgagctgtatcactacgtgttgcggctctgc
aaggacacaaacgactggcgcaaggcggaggccacctggaccaagatgcaggaggagaat
gtgataccaagagagaggaccctgcgcatactggctgacatcctcaagagtaatggacag
gaggtgcctttcgaggtgcctgaggtgtggtatgagcaggctgcagacagagaagcacag
tcagagaccaagcctgaagggtcaaagggcaaagccaccaagtcagccagcacccaggct
gctactgcagagaacaaccctgctgactaccagttcagactgctcaccctatgcaagaag
ggcaaggctaaagaggcctatgatatgctgaaggatattgaaaggaagggtgtgaccctg
ggcccggccccctacgacagtctgatccgggctctgctggccgagggtagtatggagaac
gccatggtggtcaaagagattgccgtaggccgtatcccagggttcaagctgaatgacata
gccaacagcctcctcatcattacacaggtcaagagagggctagccaaagatggcatgtcc
acactcaagtccatgctgcagggagaccaggtgccctcaaaactgtccgtcacacgattg
gtccaatccctcggtagccatggggatgtccaaggcatccaggaagtggaggttctgatg
aaggggttgggcacgcccctcaacctgtcaagcatggtctttctcaacaacactgccatg
gcacacatcaaaaatggagacctggactctgcagtggagggcttggaggctgtctacaca
cagggtgatgggcctcagggtccggctgccagcatggcctttgtcttcaggaaggtgttg
gaggagaacaatggcgctgctctggataaattaagtgccatggcagagaggctggcaaat
cacttttcatcgtacagagctgcttcagacctcttcctacagctgctggaggctaacatg
gtagaggacgccaagttcatgctggcccgctgtaatgctgtggctgaacagaaggagatt
ctggtctcttacatgtccaggctggcccagaaaccaggccaggtgggcaagatcaagacc
ctgatgactctcatccctgacttcacagagaaggagacgttgtatccctacctgatgaag
tgttatggtgtggacaacgacctggtgtcggctaaagccctgtaccagcagatgcagacg
gagggagtggaggctgatgagctgtgtctgaagagacttgccgtgctgtacaggaacgca
ggagagaccgtcccctttactgagccacctgagacgtttaagttttatgcagaaaagctg
aaggagaaatccaagggatcacatccgagcaccgcagtggaggaataa
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