Oncorhynchus tshawytscha (Chinook salmon): 112224864
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Entry
112224864 CDS
T05605
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112224864
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112224864
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
112224864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40
ANAPC4_WD40
Lgl_C
Synaptobrevin
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
112224864
NCBI-ProteinID:
XP_042175937
LinkDB
All DBs
Position
LG03:complement(75536957..75799557)
Genome browser
AA seq
1146 aa
AA seq
DB search
MKKFRKVLDGLSSSSQGAVASPSCSNAAGTPPTPQDIHVQETLLSENFHICKTVRHGFPY
QPTCLAFDPVQKILAIGSRTGGIRILGRPGVDCYSQHESGAAVLQLQFLINEGALVTACA
DDTLHLWNLRQRRPAILHSLKFNRERITFCHIPFQSKWLYVGTERGNTHIVNIESFVLSG
YVIMWNKAIELATKAHPGPVVHLSDSPKDECKLLIGFESGTVVQWDLRAKKVDFRIYYDE
AIHSVSWHHEGNQFMCSHSDGSLTMWNLRNTARPIQITYPHGKILKEGRKESCKPILKVE
YKTSRNSNEPYVIFSGGLSYDKAGGRRPTLTIMHGKAITVLEMDHPIVEFLVLCDTPYSN
KIQDPYAVVLLLEKDFIMVDLTQSNFPIFENPYSMDIHESPVTCTAYFAECPPDIIPVLY
SVGAKQKKTGYSHKEWPVSGGTWTLGSQTYPEVIVTGHADGTVKFWDASAITLQMLYKLK
TSKVFENPNAGEGRAVEQVEEDPYAIQMVRWCPQSRLFCVVGISAHVILYHFSKHDANAE
IVSLEVRLQFDSEDGISLSETDPCFSDPSSHSPQMPGSPSNGSQDSLHYRKVKSRPVRMP
PGYQAELVMQLQWVDREPPQQITSLDINSAYGLLAFGSCNGLVVVDYIQKTILMCVSTLD
LYGAADPYQRLTRSPRKNRQSTSGLTELSDNKVSMDMERSKSPTSDHVNGHCTSPTSQPC
SLGKSRIPGAPEGPRLPRRGPGRPPFRKAQSAACMEISLPVCSLTEESRENSFSFSRSSS
VSSIGRDTKEVVTTLHFGESYGRKGDSLPTACLWVGTSLGVVLLLPISIPTEKERLEEPV
TMGPSGTVLMLKGSVLSFSFLDCAGTLIQSPYEVWREPNVPEDPDEPCRRKLVNLSPLSS
QEACGDGHLTVVCSEKQAKVILMPTQAVLFTHNVTESSFLLRANVVSVCNSVCLACFCAN
GHVMTLSLPSLRLLMDTNYFPLTDMRIARTFVFTNGGQALYLSSPTEIQRIAYSQEMTDN
LQDMLGELFTPIETPEAQSQGFLKGFFGGNAQTFDREELFGEAAAGKASRSLAQHIPGPM
GLENVRAAAGGVVGDLARARIALEQRGERLGELEERTTLMMKSAETFSTHAHQVMLKHKD
KKWYQL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcggaaggtactggatggcctgtcttcctcctctcagggggctgtcgcg
tccccgtcatgcagcaatgcagccggtaccccgcccactccacaggatattcatgtccag
gagacgctactctcggaaaactttcacatatgcaagacggtacgccatggcttcccctac
cagcccacctgcctggcattcgaccccgtccagaagatcctagccatcggctccagaaca
ggaggcatacggatactgggccggcctggtgtggactgctacagccagcatgagagtgga
gccgctgttctccagctacagttcctcatcaatgagggagctctggtcacagcatgtgct
gatgacacactgcacctgtggaaccttcgccagagacgcccagccatcctgcactcgctc
aaattcaacagggagaggatcacgttttgccacatccccttccagagtaaatggctgtac
gtgggcacagagcgtggcaacacacacatcgtcaacatcgaatccttcgttctgtctgga
tacgtcatcatgtggaacaaggccatagagttagcaactaaagcccatccaggacccgta
gtccatctgagtgacagcccgaaggatgaatgcaagttgctgatagggtttgaaagtgga
acagtagtacagtgggacctccgggccaagaaggttgacttcagaatctactacgatgaa
gctatccattctgtgagctggcaccatgaagggaaccagttcatgtgtagccactcagac
ggcagcttgactatgtggaacctgaggaacacagccagacctattcagatcacatatcct
catgggaagatactgaaggaagggaggaaggagtcgtgtaagcccatcctcaaggtggaa
tacaagacctccagaaacagcaacgagccctatgtcatcttctctgggggtctgtcatac
gacaaggctgggggacggaggcccaccctgaccatcatgcatggcaaggccattacggtc
ctggagatggaccaccctatcgtagagttcctggtgctctgtgacaccccatactccaac
aagatccaggatccgtatgcggtggtgctgcttctagaaaaggactttatcatggttgat
ctgacacagagcaatttccctatctttgagaacccatactccatggacatccacgagtct
cctgtcacctgtacagcctacttcgccgagtgccccccggatatcatcccagtcctctac
tccgtaggagccaagcagaagaagaccggctacagccacaaggagtggccagtgagtggc
ggtacgtggacattaggctcacagacctacccagaggttatcgtcacaggacacgcagat
ggaaccgtcaagttttgggatgcatctgctattacgctgcagatgctgtacaagctgaag
acgtctaaggtgtttgagaaccccaatgcgggtgaaggccgggcggtcgagcaggtagag
gaggacccttacgccattcagatggtccgctggtgcccgcagagccgtctcttctgtgtg
gtgggcatctctgcccacgtcatcctctaccacttcagcaaacacgacgccaacgcagag
atagtgtctctagaagtgcgtctgcagtttgattcagaggatggcatctccctgtcagag
acagacccatgtttctcggaccccagttcccactccccccagatgcccggtagccccagc
aacggctcacaagacagcctccactaccgcaaggtgaagagtcgtccagtgcgcatgccc
ccggggtatcaggctgagttggtgatgcagctacagtgggtggatagagagcccccccag
cagatcaccagcctggatatcaactctgcctatggccttctagcgtttgggagctgcaat
ggtctagtggtggtggactacattcagaagaccatcctgatgtgtgtgagcacgttggac
ctgtacggagccgctgacccctaccaacgtctcacacgttccccacgcaaaaacaggcag
tccacctcaggcctaacggaactgtccgacaacaaggtgtccatggacatggagagaagc
aagtcacccacctcagatcatgtcaatggacattgcactagccccacctcccagccatgc
tccttggggaagtctcgcattccaggggctcctgagggcccgcggctcccccggagaggg
cccggccgaccacccttccgcaaggcccagtctgccgcttgcatggagatctctttgcca
gtttgctccctcacggaagaaagcagagagaattcgttcagcttctcacggagctccagt
gtgtccagtatcggccgcgacaccaaggaagtggtgaccacgctgcatttcggagagtcc
tacggtcgtaaaggtgactccctgcccaccgcctgcctgtgggtgggcaccagcctgggc
gtggtcctcctactgcccatatccatccccacagagaaggagaggctggaggagcctgtc
accatggggcccagcggtaccgtcctgatgctgaagggctcagtgctaagcttttcattc
ctggactgtgcgggcacccttatccagagtccctacgaggtttggcgggaacccaacgtc
cccgaggaccccgacgagccctgcaggcgcaagctggtcaacttatccccgctgtcttcc
caggaggcatgtggggacggtcacctgaccgtggtgtgttctgagaaacaggccaaggtg
atcctcatgcctacccaggccgtcctgttcacacacaacgtcacagagtcttccttcctc
ctgcgggccaacgtcgtctccgtctgcaacagcgtctgcctggcctgcttctgtgccaac
ggacacgtcatgaccctcagtttgcccagtcttagactcctgatggatactaactacttt
cccctgacggacatgcgtatcgcccgtaccttcgtcttcaccaacggcggtcaggctctg
tacctgagctctcctacagagatacaacgcatcgcatacagccaagagatgacggacaac
ctgcaggacatgctgggggagctgttcactcctattgaaacaccagaggcccagagccaa
ggattcctcaagggtttcttcgggggcaacgcccagaccttcgacagagaagagctgttt
ggggaggcagcagcgggaaaggcctctcggagcctggcccagcacatccctggtccaatg
ggattggagaatgtgagggctgcagccggcggggtggtgggggacctggcccgagcccgc
atcgccctggagcagagaggagagagactgggagagctggaggaacgcaccaccctcatg
atgaaaagtgcagagacgttctcaacacacgcccaccaggtaatgctgaaacacaaggac
aagaaatggtatcaactttaa
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integrated database retrieval system
