Oncorhynchus tshawytscha (Chinook salmon): 112224987
Help
Entry
112224987 CDS
T05605
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
112224987 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112224987 (hdac4)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
112224987 (hdac4)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
112224987 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
112224987
NCBI-ProteinID:
XP_042162669
LinkDB
All DBs
Position
LG26:9090182..9324816
Genome browser
AA seq
1065 aa
AA seq
DB search
MLRTIFETDSPSSLSPADGLPRKEQPLELLKPSGLNHIQSVDVRAALPMQVPPAAIPMDL
RMDQPFGLAPRPDDQGHQGQVPGLREQQLQQELLALKHKQQIQRQLLIAEFQRQHEQLSR
QHEVQLQEHVKHQQDLLALKHQQELLEHQRKMERHRQEQEMEKQQREQKLLLLKNKERGQ
ESAVASTEVKMRLQEFVLNKKKALAQRSLNHCMNTDPRYWYGKTQHSSLDQSSPPQTGMS
PYSHAILGMYDPKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPLLRRKDGPIITTAKKR
SLDMAESACNSAPGSGPSSPNNSSSNITNENGIASTVEASLAHRLAGREGPLSQLSLYTS
PSLPNITLGLPATGPSSMTSGQQDGDRLSMHERLQQGFPITTPFIPGAHLPSYLTDGGTA
HNPLLQHMVLLEQSQNPLGLSCCLGGLPLQSPSIHKLRGQHRPLGRTQSAPLPQNAQALQ
QLVVQQQHQQFLEKHKQQFQQQQLHINKMMAKPSEPGPGRQHESHPEETEEELREHQALC
PQEGVLMRGVTVKQEPPDPQEEERDNRERMVDQELLFRQQAVLLEQQRMIQLRNYQASME
SAGLSVTFPVHRPLSRAQSSPASACFPPIVVQQEPPTKPRFTTGLVYDTLMQKHQCMCGN
TNTHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHVLLYGTNPLRQK
LDSSLTPMFVRLPCGGVGVDSDTIWNEVHSSSAARLAVGSVVELVFKVAAGELKNGFAVV
RPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPNI
LYLSLHRYDDGNFFPGSGAPEEVGTGAGMGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMP
IANEFSPDVVLVSSGFDAVDGHASPLGGYKLTAKCFGYLTRQLMGLAGGRLVLALEGGHD
LTAICDASEACVSALLGIELDPIPEEVMQQRPNPNAVHSMEKVLEEHGKYWRSLQRGAST
LGHSLSEARQCETEEAETVTAMASLSVANKQRRSEEEPMEEEVPL
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaccatatttgaaacggactctccttcctctctctcccctgcagatggactg
cccaggaaagagcagcccttggaacttctgaagccatctggcctcaaccacatccaatct
gtcgacgtgagagcggcactgcccatgcaggtgcccccggccgccatccccatggacctg
cgcatggaccagccctttggcctggcaccgcgaccagacgaccagggccaccaaggacag
gtcccaggtcttcgggagcagcagctgcagcaggagctgttggccctcaaacacaaacag
cagatccagagacagctgctcatcgctgagttccagcggcaacatgagcagctctcacgc
cagcatgaggtccagctacaggagcatgttaagcaccagcaggacctcctggccctgaag
catcagcaggagctgttggagcaccagaggaagatggagagacaccgccaagagcaggag
atggagaagcagcagagggagcagaaactcctactgctcaagaacaaggagcgtggtcag
gagagtgcggtggccagcacggaggtcaagatgcggctgcaggagtttgtcctgaacaag
aagaaagccctggctcagcgcagcctcaaccactgcatgaacactgacccacgctactgg
tacgggaagacccagcacagctccctggatcagagctcccctccccagacagggatgtcc
ccttacagccacgccatcctggggatgtacgaccccaaagacgactttcctctccgcaag
acagcctctgagcccaacttgaagctccggtccaggcttaaacagaaggtgacagagcgc
agaagtagcccactgctacgtaggaaggatggtccaataatcactactgccaagaagcgc
tctctggacatggctgaatcggcctgcaacagcgcacctggctcgggccccagttctccc
aacaacagctccagtaacatcaccaatgagaatggcatcgctagtacagtcgaggcctcc
ctggcccacaggctggccggccgagagggccccttgagccagctgtctctgtacacatcg
ccctcactgcctaacatcaccctgggcctgccagccaccggcccgtccagcatgacgtca
ggccagcaggatggtgacaggctatcgatgcatgagaggctgcagcagggcttccccata
accactcccttcatcccgggggcccacctgccctcctacctgactgatgggggcacggca
cacaaccccctcctccagcacatggtgctcctggagcagtcccagaacccactaggtctg
tcctgctgcctgggcgggctgcccttgcagtcgccctccatccacaagctgcgtgggcag
caccgtcccctagggaggacccagtcggcccctctaccccagaacgcccaggccctgcag
cagctggtggtccagcagcagcaccagcagttcctggagaaacacaagcagcagttccag
cagcagcaactgcacatcaacaagatgatggccaagcccagcgaaccagggccgggtcga
cagcacgagagccacccggaggagacagaagaggagctaagggagcaccaagccctgtgt
ccccaggaaggagtcctcatgcgcggggtgacggtcaagcaggagcccccggaccctcag
gaagaggagagggacaaccgagagaggatggtcgaccaggagctgctcttcagacagcag
gctgtgttattggagcagcagaggatgatccagttaaggaactaccaggcttccatggag
tcagccggcctgtcagtcaccttcccagtgcaccgccccctctccagggcccaatcatct
cccgcctcggcctgcttcccccccattgtggtacagcaggagccgcccaccaagcctcgc
ttcaccactggcctggtgtatgacacgttgatgcagaagcaccagtgtatgtgtggcaac
accaacacacaccccgagcacgccggacgcatccagagcatctggtcccgactgcaggag
actggactgaggggcaagtgtgagtgtatccgagggcggaaagccactctggaggagttg
cagacagttcactctgaggcccacgtccttctgtatggaaccaacccactccgacagaaa
ctagacagttcattgactcccatgtttgtgaggctgccttgtggaggggtaggggtggac
agcgacaccatttggaatgaggtccactcgtccagcgcggctcgtctggctgtgggctcc
gttgtggagctggtcttcaaagtggcggctggagagctcaagaacggctttgctgtagtc
cggcctcctggacaccacgcggaggagagcacacctatgggattctgttacttcaactcc
gtggccatcgcagctaaacttctgcagcagaggctcagtgtcagtaagatcctgattgtg
gattgggatgttcaccatggaaatggcacgcaacaagcattctacagcgaccccaacatt
ctctatctgtcactccatcgctacgacgatggcaacttcttccccggcagtggagcgcct
gaagaggtgggcactggggcaggcatgggcttcaatgtgaacatggctttcactgggggg
ctagaaccacccatgggagacgcagagtacctggctgccttcaggacggtggtgatgccc
atcgccaatgagttttctcctgacgtggttctggtgtcttcaggattcgatgctgtggac
ggccacgcatcacccctgggagggtacaagctaacagccaaatgtttcggctacctgacc
aggcagctgatggggctggccgggggacgcctggtactggccctggaggggggccatgac
ctcactgccatctgcgatgcctctgaagcctgcgtctctgctttgctaggaatcgagttg
gatcctatccctgaggaggtgatgcagcagaggcccaaccccaacgctgtccactccatg
gagaaggtgctggaggaacatggtaaatactggcgatctctgcagcgcggggcctccaca
ctgggccactctctgagcgaggctcgtcagtgtgagacggaggaggccgagaccgtcact
gccatggcctccctctctgtggccaacaagcagaggaggagtgaggaggagcctatggag
gaggaggtgcctctgtaa
DBGET
integrated database retrieval system
